MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81950 bp
Accession: NZ_CP022408 Location: 1..81950 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: plasmid punamed1
Accession: NZ_CP022408 Location: 1..81950 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: plasmid punamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGC46_RS28725 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| CGC46_RS28735 () | 1277..1951 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS28740 () | 1948..2295 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS28745 () | 2315..3871 | + | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS28750 () | 3905..4294 | + | 390 | Protein_4 | IS91 family transposase ISMno23 | Transposase |
| CGC46_RS28760 () | 4695..5060 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| CGC46_RS28765 () | 5060..6247 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| CGC46_RS28770 () | 6526..8082 | - | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS28775 () | 8102..8449 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS28780 () | 8446..9120 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS28785 () | 9174..9560 | - | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| CGC46_RS28795 () | 10948..11178 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| CGC46_RS28805 () | 11310..11707 | - | 398 | Protein_13 | Transcriptional repressor MprA | VF |
| CGC46_RS28810 () | 12026..12165 | + | 140 | Protein_14 | helix-turn-helix domain-containing protein | - |
| CGC46_RS28815 () | 12158..12543 | + | 386 | Protein_15 | IS200-IS605 family transposase ISEc46 | Transposase |
| CGC46_RS28820 () | 12568..13597 | - | 1030 | Protein_16 | IS630 family transposase | - |
| CGC46_RS28825 () | 13699..13917 | + | 219 | Protein_17 | transposase | - |
| CGC46_RS28830 () | 14488..14871 | + | 384 | WP_101329730.1 | hydrogenase | - |
| CGC46_RS28835 () | 14889..17138 | + | 2250 | Protein_19 | Toxin B | VF |
| CGC46_RS28840 () | 17194..18407 | + | 1214 | WP_164502361.1 | IS3 family transposase IS629 | Transposase |
| CGC46_RS28855 () | 18910..19326 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CGC46_RS28860 () | 19323..19553 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CGC46_RS28880 () | 20113..20526 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| CGC46_RS28885 () | 20528..21310 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| CGC46_RS28890 () | 21483..21836 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| CGC46_RS29780 () | 21844..22035 | - | 192 | Protein_26 | lipid II-degrading bacteriocin | - |
| CGC46_RS29785 () | 22039..22182 | - | 144 | Protein_27 | transcriptional regulator | - |
| CGC46_RS28900 () | 22249..23688 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| CGC46_RS28905 () | 23692..25812 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| CGC46_RS28910 () | 25862..28858 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| CGC46_RS28915 () | 28860..29375 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| CGC46_RS28925 () | 29898..30550 | - | 653 | Protein_32 | IS3 family transposase IS629 | Transposase |
| CGC46_RS28930 () | 32025..32846 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| CGC46_RS28935 () | 32846..33952 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| CGC46_RS28940 () | 34046..35767 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| CGC46_RS28945 () | 35841..36839 | + | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CGC46_RS28950 () | 36892..37080 | + | 189 | Protein_37 | hypothetical protein | - |
| CGC46_RS28955 () | 37143..38681 | - | 1539 | WP_101329731.1 | IS66 family transposase ISEc8 | Transposase |
| CGC46_RS28960 () | 38731..39078 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CGC46_RS28970 () | 39315..39680 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| CGC46_RS28975 () | 39680..40867 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| CGC46_RS28980 () | 41458..42457 | + | 1000 | Protein_42 | IS91 family transposase ISEc37 | Transposase |
| CGC46_RS28985 () | 43077..43876 | + | 800 | Protein_43 | ISL3 family transposase ISEc38 | Transposase |
| CGC46_RS28990 () | 43943..45099 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| CGC46_RS28995 () | 45147..45853 | + | 707 | Protein_45 | ISL3 family transposase ISEc38 | Transposase |
| CGC46_RS29005 () | 46105..46491 | + | 387 | Protein_46 | IS66 family transposase ISEc23 | Transposase |
| CGC46_RS29010 () | 46562..47570 | + | 1009 | Protein_47 | IS3 family transposase IS911 | Transposase |
| CGC46_RS29015 () | 47628..48841 | + | 1214 | WP_101329727.1 | IS3 family transposase IS1203 | Transposase |
| CGC46_RS29020 () | 48884..49045 | + | 162 | Protein_49 | IS3 family transposase | - |
| CGC46_RS29025 () | 49039..50575 | + | 1537 | Protein_50 | IS66 family transposase | - |
| CGC46_RS29030 () | 50603..51765 | + | 1163 | WP_101329732.1 | IS3 family transposase ISEc17 | Transposase |
| CGC46_RS29035 () | 51867..52275 | - | 409 | Protein_52 | IS3 family transposase | - |
| CGC46_RS29040 () | 52282..52512 | + | 231 | WP_001443774.1 | transposase | - |
| CGC46_RS29045 () | 52627..62127 | + | 9501 | WP_000581690.1 | Toxin B | VF |
| CGC46_RS29060 () | 63087..64118 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| CGC46_RS29075 () | 64827..65468 | + | 642 | WP_000335844.1 | transcription termination factor NusG | - |
| CGC46_RS29080 () | 65609..66274 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| CGC46_RS29090 () | 66541..67161 | + | 621 | WP_000176503.1 | DUF1449 family protein | - |
| CGC46_RS29095 () | 67209..67421 | - | 213 | Protein_59 | IS3 family transposase ISSfl10 | Transposase |
| CGC46_RS29100 () | 67483..67656 | + | 174 | Protein_60 | IS66 family transposase | - |
| CGC46_RS29105 () | 68099..72001 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| CGC46_RS29790 () | 72249..72506 | - | 258 | WP_000114001.1 | hypothetical protein | - |
| CGC46_RS29120 () | 72545..72757 | + | 213 | Protein_63 | IS3 family transposase ISSfl10 | Transposase |
| CGC46_RS29125 () | 72898..73952 | - | 1055 | Protein_64 | IS3 family transposase ISSd1 | Transposase |
| CGC46_RS29130 () | 74004..74771 | + | 768 | Protein_65 | IS3 family transposase | - |
| CGC46_RS29135 () | 74851..75246 | - | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| CGC46_RS29140 () | 75246..76205 | - | 960 | WP_000921962.1 | plasmid segregation protein ParM | - |
| CGC46_RS29145 () | 76478..77380 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| CGC46_RS29150 () | 77377..77688 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| CGC46_RS29155 () | 77764..78447 | + | 684 | WP_000086163.1 | DNA methylase | - |
| CGC46_RS29160 () | 78447..78665 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| CGC46_RS29165 () | 78677..79111 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| CGC46_RS30275 () | 79156..79395 | + | 240 | Protein_73 | hypothetical protein | - |
| CGC46_RS30010 () | 79390..79638 | + | 249 | Protein_74 | conjugation system SOS inhibitor PsiB | - |
| CGC46_RS29175 () | 79635..80039 | + | 405 | Protein_75 | plasmid SOS inhibition protein A | - |
| CGC46_RS29180 () | 80145..81301 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|