MGE detailed information
MGE type: Prophage MGE length: 57807 bp
Accession: NZ_CP022407 Location: 3347376..3405182 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: chromosome
Accession: NZ_CP022407 Location: 3347376..3405182 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGC46_RS17840 () | 3343227..3344642 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| CGC46_RS17845 () | 3344725..3345708 | + | 984 | Protein_3290 | quinone oxidoreductase | - |
| CGC46_RS17850 () | 3345874..3346116 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| CGC46_RS17855 () | 3346250..3347287 | - | 1038 | WP_000543822.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| CGC46_RS17860 () | 3347376..3348473 | + | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CGC46_RS17865 () | 3348535..3348783 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| CGC46_RS17870 () | 3349231..3350387 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| CGC46_RS17875 () | 3350380..3350640 | + | 261 | Protein_3296 | hypothetical protein | - |
| CGC46_RS29610 () | 3350644..3351294 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| CGC46_RS17890 () | 3351519..3352395 | - | 877 | Protein_3298 | hypothetical protein | VF |
| CGC46_RS17900 () | 3352536..3352652 | - | 117 | WP_001370118.1 | phage tail fiber C-terminal domain-containing protein | - |
| CGC46_RS29615 () | 3353855..3354118 | - | 264 | WP_024174195.1 | phage tail fiber C-terminal domain-containing protein | - |
| CGC46_RS17910 () | 3354120..3355433 | - | 1314 | WP_032212803.1 | ISNCY family transposase KIS | Transposase |
| CGC46_RS17915 () | 3355498..3356097 | - | 600 | WP_001230379.1 | Outer membrane protein X | VF |
| CGC46_RS17920 () | 3356164..3359556 | - | 3393 | WP_032212804.1 | host specificity protein J | - |
| CGC46_RS17925 () | 3359792..3360427 | - | 636 | WP_077696211.1 | tail assembly protein | - |
| CGC46_RS17930 () | 3360373..3361116 | - | 744 | WP_001370115.1 | C40 family peptidase | - |
| CGC46_RS17935 () | 3361122..3361820 | - | 699 | WP_001299882.1 | phage minor tail protein L | - |
| CGC46_RS17940 () | 3361820..3362149 | - | 330 | WP_000847401.1 | phage tail protein | - |
| CGC46_RS17945 () | 3362146..3364758 | - | 2613 | WP_032212771.1 | phage tail tape measure protein | - |
| CGC46_RS17950 () | 3364739..3365152 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| CGC46_RS17955 () | 3365179..3365601 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| CGC46_RS17960 () | 3365615..3366367 | - | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| CGC46_RS17965 () | 3366375..3366770 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| CGC46_RS17970 () | 3366767..3367345 | - | 579 | WP_024025847.1 | phage tail protein | - |
| CGC46_RS17975 () | 3367357..3367710 | - | 354 | WP_000753019.1 | head-tail joining protein | - |
| CGC46_RS17980 () | 3367722..3368117 | - | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| CGC46_RS17985 () | 3368159..3369184 | - | 1026 | WP_024025845.1 | major capsid protein | - |
| CGC46_RS17990 () | 3369240..3369572 | - | 333 | WP_001299443.1 | head decoration protein | - |
| CGC46_RS17995 () | 3369582..3370901 | - | 1320 | WP_032212710.1 | S49 family peptidase | - |
| CGC46_RS18000 () | 3370882..3372483 | - | 1602 | WP_024026143.1 | phage portal protein | - |
| CGC46_RS18005 () | 3372480..3372686 | - | 207 | WP_000198153.1 | gpW family protein | - |
| CGC46_RS18010 () | 3372683..3374608 | - | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| CGC46_RS18015 () | 3374583..3375128 | - | 546 | WP_000867498.1 | terminase small subunit | - |
| CGC46_RS18025 () | 3375515..3375739 | + | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| CGC46_RS18030 () | 3375821..3376135 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| CGC46_RS29620 () | 3376661..3376846 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| CGC46_RS29625 () | 3377074..3377220 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| CGC46_RS18045 () | 3377220..3377789 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| CGC46_RS18050 () | 3378060..3378593 | - | 534 | WP_000992088.1 | lysozyme | - |
| CGC46_RS18055 () | 3378644..3378988 | - | 345 | WP_000731221.1 | YdfR family protein | - |
| CGC46_RS18060 () | 3378993..3379208 | - | 216 | WP_000284522.1 | class II holin family protein | - |
| CGC46_RS18065 () | 3379358..3381220 | - | 1863 | WP_000143128.1 | DUF1737 domain-containing protein | - |
| CGC46_RS18090 () | 3382043..3382195 | - | 153 | WP_001339373.1 | restriction endonuclease subunit M | - |
| CGC46_RS18100 () | 3382505..3382870 | - | 366 | Protein_3334 | antitermination protein | - |
| CGC46_RS18110 () | 3384132..3384518 | - | 387 | Protein_3336 | antitermination protein | - |
| CGC46_RS18115 () | 3384532..3385521 | - | 990 | WP_001370152.1 | DUF968 domain-containing protein | - |
| CGC46_RS18120 () | 3385573..3385830 | - | 258 | WP_001370224.1 | hypothetical protein | - |
| CGC46_RS18125 () | 3385827..3387227 | - | 1401 | WP_000203855.1 | replicative DNA helicase | - |
| CGC46_RS18130 () | 3387224..3388123 | - | 900 | WP_000988265.1 | ATP-binding protein | - |
| CGC46_RS18135 () | 3388134..3388958 | - | 825 | WP_000061545.1 | helix-turn-helix domain-containing protein | - |
| CGC46_RS29945 () | 3388955..3389179 | - | 225 | WP_000618008.1 | hypothetical protein | - |
| CGC46_RS18145 () | 3389176..3389370 | - | 195 | WP_000626861.1 | hypothetical protein | - |
| CGC46_RS18150 () | 3389367..3390533 | - | 1167 | WP_001087349.1 | Rha family phage regulatory protein | - |
| CGC46_RS18155 () | 3390530..3391114 | - | 585 | WP_000514175.1 | hypothetical protein | - |
| CGC46_RS18160 () | 3391142..3391339 | - | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| CGC46_RS18165 () | 3391435..3392088 | + | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| CGC46_RS18175 () | 3392546..3392908 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| CGC46_RS18180 () | 3392974..3393798 | + | 825 | WP_000081294.1 | YfdQ family protein | - |
| CGC46_RS18185 () | 3393926..3394084 | + | 159 | Protein_3350 | 5'-deoxynucleotidase | - |
| CGC46_RS18190 () | 3394137..3395350 | + | 1214 | WP_101329727.1 | IS3 family transposase IS1203 | Transposase |
| CGC46_RS18195 () | 3395441..3395776 | + | 336 | WP_000543621.1 | hypothetical protein | - |
| CGC46_RS18200 () | 3395767..3396117 | + | 351 | WP_001242740.1 | hypothetical protein | - |
| CGC46_RS18205 () | 3396114..3396587 | + | 474 | WP_000145671.1 | class I SAM-dependent methyltransferase | - |
| CGC46_RS18210 () | 3396734..3397201 | + | 468 | WP_000829413.1 | hypothetical protein | - |
| CGC46_RS18215 () | 3397203..3397394 | + | 192 | WP_001014294.1 | hypothetical protein | - |
| CGC46_RS18220 () | 3397397..3398131 | + | 735 | WP_001094871.1 | DUF551 domain-containing protein | - |
| CGC46_RS18225 () | 3398131..3398703 | + | 573 | WP_001061339.1 | 3'-5' exoribonuclease | - |
| CGC46_RS18230 () | 3398740..3399021 | + | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| CGC46_RS29950 () | 3399069..3399242 | - | 174 | WP_000390069.1 | hypothetical protein | - |
| CGC46_RS18235 () | 3399282..3399668 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| CGC46_RS18240 () | 3399698..3400270 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| CGC46_RS18245 () | 3400505..3400627 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| CGC46_RS18250 () | 3400990..3401976 | - | 987 | WP_000912572.1 | DUF2713 domain-containing protein | - |
| CGC46_RS18255 () | 3402294..3402809 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| CGC46_RS18260 () | 3402851..3403060 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| CGC46_RS18265 () | 3403176..3404501 | - | 1326 | WP_001370252.1 | MATE family efflux transporter DinF | - |
| CGC46_RS18270 () | 3404574..3405182 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| CGC46_RS18275 () | 3405292..3405660 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| CGC46_RS18280 () | 3405831..3408254 | + | 2424 | WP_000017353.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| CGC46_RS18285 () | 3408409..3409281 | - | 873 | WP_000455240.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| CGC46_RS18290 () | 3409294..3409791 | - | 498 | WP_001295693.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|