MGE detailed information
MGE type: Genomic_island MGE length: 38764 bp
Accession: NZ_CP022407 Location: 3218483..3257246 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: chromosome
Accession: NZ_CP022407 Location: 3218483..3257246 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGC46_RS17205 () | 3214098..3214436 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CGC46_RS17210 () | 3214412..3216109 | + | 1698 | WP_000068972.1 | protein-disulfide reductase DsbD | - |
| CGC46_RS17215 () | 3216146..3216721 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| CGC46_RS17225 () | 3217101..3218366 | + | 1266 | WP_001218843.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CGC46_RS17230 () | 3218483..3219103 | - | 621 | Protein_3182 | IS66 family transposase ISEc8 | Transposase |
| CGC46_RS17240 () | 3219357..3220031 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS17245 () | 3220028..3220375 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS17250 () | 3220395..3221765 | + | 1371 | Protein_3185 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS17255 () | 3221770..3222561 | - | 792 | Protein_3186 | NERD domain-containing protein | - |
| CGC46_RS17260 () | 3222697..3223245 | - | 549 | WP_000603950.1 | Outer membrane protein X | VF |
| CGC46_RS29935 () | 3223821..3223994 | - | 174 | WP_001453071.1 | hypothetical protein | - |
| CGC46_RS17275 () | 3224172..3225437 | + | 1266 | Protein_3189 | IS4 family transposase ISEc13 | Transposase |
| CGC46_RS17285 () | 3226228..3227877 | + | 1650 | WP_001121620.1 | hypothetical protein | VF |
| CGC46_RS17290 () | 3228096..3228245 | + | 150 | Protein_3191 | IS1 family transposase | - |
| CGC46_RS17295 () | 3228486..3229475 | + | 990 | WP_000953032.1 | hypothetical protein | VF |
| CGC46_RS17300 () | 3229524..3230198 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| CGC46_RS17305 () | 3230534..3231475 | + | 942 | Protein_3194 | IS630 family transposase ISEc33 | Transposase |
| CGC46_RS17310 () | 3232072..3241743 | + | 9672 | WP_001239100.1 | Toxin B | VF |
| CGC46_RS17315 () | 3241915..3242265 | + | 351 | Protein_3196 | IS256 family transposase ISEic2 | Transposase |
| CGC46_RS17320 () | 3242397..3242822 | + | 426 | WP_000422707.1 | IS66 family transposase ISEc23 | Transposase |
| CGC46_RS17325 () | 3242819..3243016 | + | 198 | Protein_3198 | IS66 family transposase ISEc23 | Transposase |
| CGC46_RS17330 () | 3243081..3244237 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| CGC46_RS17335 () | 3244281..3244436 | + | 156 | Protein_3200 | IS66 family insertion sequence element accessory protein TnpB | - |
| CGC46_RS17340 () | 3244467..3245255 | + | 789 | Protein_3201 | IS66 family transposase ISEc47 | Transposase |
| CGC46_RS17345 () | 3245340..3245729 | + | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| CGC46_RS17350 () | 3245726..3246073 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CGC46_RS17355 () | 3246123..3247661 | + | 1539 | WP_000997984.1 | IS66 family transposase ISEc8 | Transposase |
| CGC46_RS17360 () | 3247896..3249434 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CGC46_RS17365 () | 3249799..3251133 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CGC46_RS17370 () | 3251213..3253360 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CGC46_RS17375 () | 3253419..3254876 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| CGC46_RS17380 () | 3255113..3256630 | + | 1518 | WP_001295082.1 | lysine--tRNA ligase | - |
| CGC46_RS17385 () | 3256749..3256922 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CGC46_RS17390 () | 3256950..3257246 | - | 297 | WP_071532590.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CGC46_RS17400 () | 3257473..3257745 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CGC46_RS17405 () | 3257757..3257987 | - | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| CGC46_RS17410 () | 3258168..3259799 | + | 1632 | WP_001216468.1 | sensor histidine kinase | - |
| CGC46_RS17415 () | 3259796..3260515 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|