MGE detailed information
MGE type: Prophage MGE length: 54308 bp
Accession: NZ_CP022407 Location: 1585088..1639395 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: chromosome
Accession: NZ_CP022407 Location: 1585088..1639395 Organism: Escherichia coli O121:H19 strain 16-9255 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGC46_RS08515 () | 1580185..1581978 | - | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
| CGC46_RS08520 () | 1581975..1583093 | - | 1119 | WP_001370123.1 | hydrogenase 1 small subunit | - |
| CGC46_RS08535 () | 1584210..1584962 | + | 753 | WP_012817749.1 | type III effector | - |
| CGC46_RS08540 () | 1585088..1585357 | - | 270 | WP_032212659.1 | phage tail fiber C-terminal domain-containing protein | - |
| CGC46_RS29845 () | 1585359..1585919 | - | 561 | Protein_1601 | phage tail fiber C-terminal domain-containing protein | - |
| CGC46_RS30115 () | 1586244..1586662 | - | 419 | Protein_1602 | prophage tail fiber N-terminal domain-containing protein | - |
| CGC46_RS08555 () | 1586725..1587298 | - | 574 | Protein_1603 | hypothetical protein | VF |
| CGC46_RS30120 () | 1587395..1588247 | - | 853 | Protein_1604 | DUF3672 domain-containing protein | - |
| CGC46_RS30125 () | 1588376..1588887 | - | 512 | Protein_1605 | homoserine acetyltransferase | - |
| CGC46_RS30130 () | 1589030..1589728 | - | 699 | WP_213080445.1 | hypothetical protein | - |
| CGC46_RS30135 () | 1589688..1589930 | - | 243 | WP_213080446.1 | hypothetical protein | - |
| CGC46_RS30140 () | 1589855..1590076 | - | 222 | WP_213080449.1 | hypothetical protein | - |
| CGC46_RS30145 () | 1590030..1590200 | - | 171 | WP_213080450.1 | hypothetical protein | - |
| CGC46_RS29865 () | 1590201..1590820 | - | 620 | Protein_1610 | phage tail protein | - |
| CGC46_RS08575 () | 1591060..1591638 | - | 579 | WP_001090017.1 | tail assembly protein | - |
| CGC46_RS29870 () | 1591635..1592365 | - | 731 | Protein_1612 | C40 family peptidase | - |
| CGC46_RS08585 () | 1592375..1593064 | - | 690 | Protein_1613 | phage minor tail protein L | - |
| CGC46_RS08595 () | 1593064..1593360 | - | 297 | WP_101329690.1 | phage tail protein | - |
| CGC46_RS08600 () | 1593394..1594469 | - | 1076 | Protein_1615 | phage tail tape measure protein | - |
| CGC46_RS29435 () | 1594692..1594883 | - | 192 | WP_157830739.1 | hypothetical protein | - |
| CGC46_RS29440 () | 1594942..1595142 | - | 201 | Protein_1617 | hypothetical protein | - |
| CGC46_RS08610 () | 1595121..1596614 | - | 1494 | Protein_1618 | tape measure protein | - |
| CGC46_RS08615 () | 1596663..1596872 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| CGC46_RS08620 () | 1596835..1597348 | - | 514 | Protein_1620 | phage tail assembly chaperone | - |
| CGC46_RS08625 () | 1597352..1597567 | - | 216 | Protein_1621 | phage tail protein | - |
| CGC46_RS08630 () | 1597588..1598061 | - | 474 | Protein_1622 | hypothetical protein | - |
| CGC46_RS08635 () | 1598145..1598370 | - | 226 | Protein_1623 | DUF3168 domain-containing protein | - |
| CGC46_RS08640 () | 1598459..1598632 | - | 174 | WP_001431923.1 | hypothetical protein | - |
| CGC46_RS08645 () | 1598629..1598853 | - | 225 | WP_157830740.1 | HK97 gp10 family phage protein | - |
| CGC46_RS08650 () | 1598841..1599248 | - | 408 | WP_101329692.1 | head-tail adaptor protein | - |
| CGC46_RS08655 () | 1599259..1599383 | - | 125 | Protein_1627 | DNA packaging protein | - |
| CGC46_RS08660 () | 1599403..1599606 | - | 204 | WP_213080451.1 | hypothetical protein | - |
| CGC46_RS29875 () | 1599578..1600319 | - | 742 | Protein_1629 | phage portal protein | - |
| CGC46_RS08685 () | 1600312..1601466 | - | 1155 | Protein_1630 | IS3 family transposase ISSd1 | Transposase |
| CGC46_RS08690 () | 1601816..1601956 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| CGC46_RS08695 () | 1602086..1602199 | - | 114 | WP_032208049.1 | DUF3950 domain-containing protein | - |
| CGC46_RS08700 () | 1602267..1602601 | + | 335 | Protein_1633 | IS3 family transposase ISSfl10 | Transposase |
| CGC46_RS08705 () | 1602667..1603823 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| CGC46_RS08715 () | 1603941..1604165 | - | 225 | WP_000735655.1 | hypothetical protein | - |
| CGC46_RS29445 () | 1604230..1604436 | - | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| CGC46_RS30150 () | 1604814..1605005 | - | 192 | WP_001443546.1 | hypothetical protein | - |
| CGC46_RS08730 () | 1605083..1605385 | - | 303 | Protein_1638 | glycoside hydrolase family protein | - |
| CGC46_RS08745 () | 1606650..1606883 | - | 234 | Protein_1640 | lysozyme | - |
| CGC46_RS08755 () | 1607043..1607315 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| CGC46_RS08765 () | 1607626..1608503 | + | 878 | Protein_1642 | IS3 family transposase IS629 | Transposase |
| CGC46_RS08775 () | 1609765..1610106 | + | 342 | Protein_1644 | IS3 family transposase ISEc25 | Transposase |
| CGC46_RS08780 () | 1610151..1610366 | - | 216 | WP_053897820.1 | class II holin family protein | - |
| CGC46_RS08790 () | 1610804..1612654 | - | 1851 | WP_101329696.1 | SASA family carbohydrate esterase | - |
| CGC46_RS29455 () | 1613097..1613228 | - | 132 | WP_001344632.1 | DUF3927 family protein | - |
| CGC46_RS08800 () | 1613225..1613656 | - | 432 | Protein_1648 | tellurite resistance TerB family protein | - |
| CGC46_RS08820 () | 1614116..1615174 | - | 1059 | WP_000935558.1 | site-specific DNA-methyltransferase | - |
| CGC46_RS08825 () | 1615325..1615522 | - | 198 | WP_000917750.1 | hypothetical protein | - |
| CGC46_RS08830 () | 1615748..1616569 | - | 822 | WP_000762899.1 | antitermination protein | - |
| CGC46_RS08835 () | 1616566..1616940 | - | 375 | WP_001121083.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CGC46_RS08840 () | 1616953..1618002 | - | 1050 | WP_001265272.1 | DUF968 domain-containing protein | - |
| CGC46_RS08845 () | 1618004..1618276 | - | 273 | WP_000046991.1 | hypothetical protein | - |
| CGC46_RS08850 () | 1618397..1618744 | - | 348 | WP_000756560.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| CGC46_RS08855 () | 1618862..1619017 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| CGC46_RS08865 () | 1619263..1619367 | - | 105 | WP_001278454.1 | hypothetical protein | - |
| CGC46_RS08870 () | 1619483..1620352 | - | 870 | WP_000208016.1 | DUF551 domain-containing protein | - |
| CGC46_RS08875 () | 1620363..1620581 | - | 219 | WP_136865621.1 | hypothetical protein | - |
| CGC46_RS08880 () | 1620587..1621261 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS08885 () | 1621258..1621605 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS08890 () | 1621625..1623181 | + | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| CGC46_RS29460 () | 1623185..1623343 | - | 159 | WP_001370098.1 | hypothetical protein | - |
| CGC46_RS08895 () | 1623345..1623563 | - | 219 | WP_000209148.1 | DUF4014 family protein | - |
| CGC46_RS08900 () | 1623596..1623808 | - | 213 | WP_000935423.1 | hypothetical protein | - |
| CGC46_RS08905 () | 1623914..1624336 | - | 423 | WP_001151187.1 | DUF977 family protein | - |
| CGC46_RS08910 () | 1624377..1625339 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| CGC46_RS08915 () | 1625362..1625787 | - | 426 | WP_000693944.1 | Rha family transcriptional regulator | - |
| CGC46_RS08920 () | 1625784..1626086 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| CGC46_RS08925 () | 1626184..1626555 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| CGC46_RS08930 () | 1626576..1626767 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| CGC46_RS08935 () | 1626769..1627047 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CGC46_RS08945 () | 1627400..1627699 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| CGC46_RS08950 () | 1627842..1628006 | - | 165 | WP_001331716.1 | hypothetical protein | - |
| CGC46_RS08955 () | 1628412..1628633 | + | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| CGC46_RS08960 () | 1628757..1631228 | + | 2472 | WP_000048560.1 | exonuclease | - |
| CGC46_RS08965 () | 1631290..1631559 | + | 270 | WP_000003742.1 | excisionase | - |
| CGC46_RS08970 () | 1631528..1632646 | + | 1119 | WP_000074974.1 | hypothetical protein ; Integrase | Integrase |
| CGC46_RS08975 () | 1632723..1633190 | - | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| CGC46_RS08980 () | 1633168..1633371 | - | 204 | WP_000824186.1 | hypothetical protein | - |
| CGC46_RS08985 () | 1633680..1634474 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CGC46_RS08990 () | 1634471..1635517 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CGC46_RS08995 () | 1635673..1636494 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CGC46_RS09000 () | 1636510..1637421 | - | 912 | WP_000291280.1 | N-acetylglucosamine kinase | - |
| CGC46_RS09005 () | 1637450..1638694 | - | 1245 | WP_001251388.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CGC46_RS09010 () | 1638694..1639395 | - | 702 | WP_001033695.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CGC46_RS09015 () | 1639388..1640587 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CGC46_RS09020 () | 1640849..1641922 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|