MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59190 bp
Accession: NZ_CP022281 Location: 1..59190 Organism: Escherichia coli strain STEC299 Replicon: plasmid pSTEC299_2
Accession: NZ_CP022281 Location: 1..59190 Organism: Escherichia coli strain STEC299 Replicon: plasmid pSTEC299_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFI09_RS26780 () | 466..822 | + | 357 | WP_101974001.1 | hypothetical protein | - |
| CFI09_RS26785 () | 902..1601 | + | 700 | Protein_2 | hypothetical protein | - |
| CFI09_RS26790 () | 1631..3204 | - | 1574 | Protein_3 | IS66 family transposase ISCro1 | Transposase |
| CFI09_RS26795 () | 3224..3571 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CFI09_RS27715 () | 3571..3639 | - | 69 | Protein_5 | IS66 family insertion sequence element accessory protein TnpB | - |
| CFI09_RS26805 () | 3700..4482 | - | 783 | WP_101974002.1 | IS21 family transposase IS100kyp | Transposase |
| CFI09_RS26810 () | 4479..5501 | - | 1023 | WP_101973680.1 | IS21 family transposase IS100kyp | Transposase |
| CFI09_RS26815 () | 5581..6180 | - | 600 | Protein_8 | IS66 family transposase IS679 | Transposase |
| CFI09_RS26820 () | 6428..10528 | - | 4101 | WP_101974003.1 | Serine protease pic autotransporter | VF |
| CFI09_RS26830 () | 11836..12228 | + | 393 | Protein_10 | Abi family protein | - |
| CFI09_RS26835 () | 12687..15049 | + | 2363 | Protein_11 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| CFI09_RS26840 () | 15624..16205 | + | 582 | WP_158639748.1 | hypothetical protein | - |
| CFI09_RS26845 () | 16299..16985 | + | 687 | WP_101974006.1 | putative fimbrial chaperone YfcS | VF |
| CFI09_RS26850 () | 17017..19497 | + | 2481 | WP_101974007.1 | Outer membrane usher protein YraJ | VF |
| CFI09_RS26855 () | 19574..20359 | + | 786 | WP_101974008.1 | helix-turn-helix transcriptional regulator | - |
| CFI09_RS26860 () | 20473..21444 | - | 972 | WP_101974009.1 | IS481 family transposase ISEc18 | Transposase |
| CFI09_RS26865 () | 21505..22461 | - | 957 | WP_101974010.1 | Abi family protein | - |
| CFI09_RS26870 () | 22814..23068 | - | 255 | WP_021515664.1 | hypothetical protein | - |
| CFI09_RS26875 () | 23123..23557 | - | 435 | WP_001293128.1 | H-NS histone family protein | - |
| CFI09_RS26880 () | 23573..23779 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| CFI09_RS26885 () | 23776..25929 | - | 2154 | WP_101974011.1 | type IA DNA topoisomerase | - |
| CFI09_RS26890 () | 25934..26509 | - | 576 | WP_101974012.1 | DNA topoisomerase III | - |
| CFI09_RS26895 () | 26513..27775 | - | 1263 | WP_001503550.1 | AAA family ATPase | - |
| CFI09_RS26900 () | 27857..28372 | - | 516 | WP_101974013.1 | thermonuclease family protein | - |
| CFI09_RS27720 () | 28369..28803 | - | 435 | WP_101974028.1 | hypothetical protein | - |
| CFI09_RS26910 () | 28884..29099 | - | 216 | WP_101974014.1 | hypothetical protein | - |
| CFI09_RS26915 () | 29154..29456 | - | 303 | WP_101974015.1 | conjugal transfer protein | - |
| CFI09_RS26920 () | 29453..29866 | - | 414 | WP_000722607.1 | hypothetical protein | - |
| CFI09_RS26925 () | 29863..31698 | - | 1836 | WP_101974016.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CFI09_RS26930 () | 31701..32732 | - | 1032 | WP_101974017.1 | Type IV secretion system protein VirB11 | VF |
| CFI09_RS26935 () | 32734..33939 | - | 1206 | WP_101974018.1 | Type IV secretion system protein virB10 | VF |
| CFI09_RS26940 () | 33936..34865 | - | 930 | WP_101974019.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CFI09_RS26945 () | 34870..35577 | - | 708 | WP_101974020.1 | type IV secretion system protein | - |
| CFI09_RS26950 () | 35823..36953 | - | 1131 | WP_015058232.1 | type IV secretion system protein | - |
| CFI09_RS26955 () | 36962..37249 | - | 288 | WP_000835347.1 | EexN family lipoprotein | - |
| CFI09_RS26960 () | 37250..38008 | - | 759 | WP_000744200.1 | pilus assembly protein | - |
| CFI09_RS26965 () | 38019..40772 | - | 2754 | WP_101974021.1 | Type IV secretion system protein virB4 | VF |
| CFI09_RS26970 () | 40794..41090 | - | 297 | WP_016247739.1 | TrbC/VirB2 family protein | - |
| CFI09_RS26975 () | 41068..41715 | - | 648 | WP_101974022.1 | Type IV secretion system protein virB1 | VF |
| CFI09_RS26980 () | 41748..41960 | - | 213 | WP_000125172.1 | hypothetical protein | - |
| CFI09_RS26985 () | 41890..42408 | - | 519 | WP_101974029.1 | transcription termination factor NusG | - |
| CFI09_RS26990 () | 42476..43704 | + | 1229 | WP_158639709.1 | IS3 family transposase IS2 | Transposase |
| CFI09_RS26995 () | 44097..45263 | - | 1167 | WP_158639749.1 | hypothetical protein | Relaxase |
| CFI09_RS27000 () | 45266..45811 | - | 546 | WP_001426313.1 | hypothetical protein | - |
| CFI09_RS27725 () | 45806..45880 | - | 75 | Protein_45 | DNA distortion polypeptide 3 | - |
| CFI09_RS27010 () | 46136..46408 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| CFI09_RS27020 () | 46640..46819 | - | 180 | WP_000439078.1 | hypothetical protein | - |
| CFI09_RS27025 () | 46863..47193 | - | 331 | Protein_48 | hypothetical protein | - |
| CFI09_RS27030 () | 47286..47501 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| CFI09_RS27035 () | 47491..47736 | - | 246 | WP_000356542.1 | hypothetical protein | - |
| CFI09_RS27040 () | 47781..48104 | - | 324 | WP_001181902.1 | hypothetical protein | - |
| CFI09_RS27045 () | 48250..48531 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CFI09_RS27050 () | 48521..48772 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| CFI09_RS27055 () | 49048..50067 | - | 1020 | WP_101974025.1 | IS110 family transposase ISEc11 | Transposase |
| CFI09_RS27060 () | 51275..52144 | + | 870 | WP_032347905.1 | replication initiation protein | - |
| CFI09_RS27065 () | 52149..53000 | + | 852 | WP_101974026.1 | replication initiation protein | - |
| CFI09_RS27070 () | 53004..53447 | + | 444 | Protein_57 | hypothetical protein | - |
| CFI09_RS27075 () | 53517..53942 | + | 426 | WP_199769561.1 | DNA distortion polypeptide 3 | - |
| CFI09_RS27080 () | 53939..54916 | - | 978 | WP_101974027.1 | hypothetical protein | - |
| CFI09_RS27085 () | 54941..55222 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| CFI09_RS27090 () | 55322..55984 | - | 663 | WP_000516403.1 | peptidyl-arginine deiminase | - |
| CFI09_RS27095 () | 56365..57009 | + | 645 | WP_033550418.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CFI09_RS27100 () | 57165..57248 | - | 84 | WP_000565612.1 | hypothetical protein | - |
| - () | 57531..57563 | + | 33 | NuclAT_0 | - | - |
| - () | 57531..57563 | + | 33 | NuclAT_0 | - | - |
| - () | 57531..57563 | + | 33 | NuclAT_0 | - | - |
| - () | 57531..57563 | + | 33 | NuclAT_0 | - | - |
| CFI09_RS27110 () | 58156..58764 | + | 609 | Protein_64 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|