MGE detailed information
MGE type: Genomic_island MGE length: 18785 bp
Accession: NZ_CP022279 Location: 4161302..4180086 Organism: Escherichia coli strain STEC299 Replicon: chromosome
Accession: NZ_CP022279 Location: 4161302..4180086 Organism: Escherichia coli strain STEC299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFI09_RS22020 () | 4156722..4157744 | - | 1023 | WP_000106002.1 | zinc-binding alcohol dehydrogenase family protein | - |
| CFI09_RS22025 () | 4157883..4158788 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| CFI09_RS22030 () | 4158959..4160611 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| CFI09_RS22035 () | 4161302..4162273 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| CFI09_RS22040 () | 4162337..4162810 | + | 474 | WP_001235679.1 | TRAP transporter small permease | - |
| CFI09_RS22045 () | 4162807..4164078 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| CFI09_RS22050 () | 4164121..4165785 | - | 1665 | WP_000919584.1 | Methyl-accepting chemotaxis protein I | VF |
| CFI09_RS22060 () | 4166162..4168312 | + | 2151 | WP_001314407.1 | pyruvate/proton symporter BtsT | - |
| CFI09_RS22065 () | 4168430..4168633 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| CFI09_RS22070 () | 4168644..4169600 | + | 957 | WP_001298065.1 | GTPase | - |
| CFI09_RS22075 () | 4169669..4171321 | - | 1653 | WP_101973826.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| CFI09_RS22080 () | 4171599..4174031 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| CFI09_RS22085 () | 4174098..4175567 | + | 1470 | WP_016237704.1 | type I restriction-modification system subunit M | - |
| CFI09_RS22090 () | 4175567..4177321 | + | 1755 | WP_101973827.1 | restriction endonuclease subunit S | - |
| - () | 4177471..4177547 | - | 77 | NuclAT_5 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_5 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_5 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_5 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4177471..4177547 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| CFI09_RS22095 () | 4177542..4177883 | + | 342 | WP_000132600.1 | endoribonuclease SymE | Toxin Detail |
| CFI09_RS22100 () | 4177930..4180023 | - | 2094 | WP_000648236.1 | DUF262 domain-containing protein | - |
| CFI09_RS22105 () | 4180121..4180201 | - | 81 | WP_020233658.1 | hypothetical protein | - |
| CFI09_RS22110 () | 4180429..4181349 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CFI09_RS22115 () | 4181534..4182814 | + | 1281 | WP_001535800.1 | DUF445 domain-containing protein | - |
| CFI09_RS22120 () | 4182930..4184081 | + | 1152 | WP_001298064.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| CFI09_RS22125 () | 4184091..4184858 | + | 768 | WP_001682532.1 | ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|