MGE detailed information
MGE type: Prophage MGE length: 109122 bp
Accession: NZ_CP022279 Location: 1839226..1948347 Organism: Escherichia coli strain STEC299 Replicon: chromosome
Accession: NZ_CP022279 Location: 1839226..1948347 Organism: Escherichia coli strain STEC299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFI09_RS09130 () | 1838100..1839059 | - | 960 | WP_000970688.1 | yersiniabactin transcriptional regulator YbtA | - |
| CFI09_RS09135 () | 1839316..1841028 | + | 1713 | WP_001327262.1 | Iron import ATP-binding/permease protein IrtA | VF |
| CFI09_RS09140 () | 1841015..1842817 | + | 1803 | WP_001608389.1 | Putative multidrug export ATP-binding/permease protein | VF |
| CFI09_RS09145 () | 1842810..1844090 | + | 1281 | WP_001286281.1 | Protein AmpG | VF |
| CFI09_RS09150 () | 1844118..1845422 | + | 1305 | WP_000703043.1 | Salicylate synthase | VF |
| CFI09_RS09155 () | 1845616..1846878 | - | 1263 | WP_033553439.1 | Prophage integrase IntA ; Integrase | Integrase |
| CFI09_RS09165 () | 1847216..1848013 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| CFI09_RS09175 () | 1848249..1849274 | - | 1026 | WP_044190935.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CFI09_RS09180 () | 1849274..1849477 | - | 204 | WP_087614020.1 | DUF4224 domain-containing protein | - |
| CFI09_RS09185 () | 1849536..1851971 | - | 2436 | WP_101973493.1 | exonuclease | - |
| CFI09_RS09190 () | 1852067..1852255 | - | 189 | WP_101973494.1 | DUF1482 family protein | - |
| CFI09_RS09195 () | 1852252..1852440 | - | 189 | WP_101973495.1 | cell division inhibitor | - |
| CFI09_RS27510 () | 1852992..1853213 | + | 222 | WP_000157196.1 | hypothetical protein | - |
| CFI09_RS09215 () | 1853203..1853583 | - | 381 | WP_101973863.1 | hypothetical protein | - |
| CFI09_RS09220 () | 1853595..1853747 | - | 153 | WP_101973496.1 | DUF1391 family protein | - |
| CFI09_RS09225 () | 1854022..1854312 | - | 291 | WP_101973497.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CFI09_RS09230 () | 1854312..1854503 | - | 192 | WP_101973498.1 | antitoxin | Antitoxin Detail |
| CFI09_RS09235 () | 1854521..1855021 | - | 501 | WP_101973499.1 | helix-turn-helix transcriptional regulator | - |
| CFI09_RS09240 () | 1855129..1855392 | + | 264 | WP_101973500.1 | helix-turn-helix domain-containing protein | - |
| CFI09_RS09245 () | 1855389..1855814 | + | 426 | WP_101973501.1 | Rha family transcriptional regulator | - |
| CFI09_RS09250 () | 1855837..1856805 | + | 969 | WP_101973864.1 | helix-turn-helix domain-containing protein | - |
| CFI09_RS09255 () | 1856812..1857558 | + | 747 | WP_101973502.1 | ATP-binding protein | - |
| CFI09_RS09260 () | 1857580..1858302 | + | 723 | WP_101973503.1 | DUF1627 domain-containing protein | - |
| CFI09_RS09265 () | 1858335..1858616 | + | 282 | WP_101973865.1 | DNA-binding protein | - |
| CFI09_RS09270 () | 1858613..1858909 | + | 297 | WP_101973504.1 | DUF4406 domain-containing protein | - |
| CFI09_RS09275 () | 1858906..1859178 | + | 273 | Protein_1706 | ead/Ea22-like family protein | - |
| CFI09_RS27515 () | 1859161..1859303 | + | 143 | Protein_1707 | ead/Ea22-like family protein | - |
| CFI09_RS09280 () | 1859432..1859683 | + | 252 | WP_101973866.1 | hypothetical protein | - |
| CFI09_RS09285 () | 1859785..1859889 | + | 105 | WP_101973867.1 | hypothetical protein | - |
| CFI09_RS09290 () | 1860061..1860705 | - | 645 | WP_101973505.1 | ParB N-terminal domain-containing protein | - |
| CFI09_RS09295 () | 1860690..1861916 | - | 1227 | WP_101973506.1 | phosphoadenosine phosphosulfate reductase | - |
| CFI09_RS09300 () | 1862133..1862405 | + | 273 | WP_101973507.1 | hypothetical protein | - |
| CFI09_RS09305 () | 1862407..1863456 | + | 1050 | WP_101973508.1 | DUF968 domain-containing protein | - |
| CFI09_RS09310 () | 1863469..1863829 | + | 361 | Protein_1714 | RusA family crossover junction endodeoxyribonuclease | - |
| CFI09_RS09315 () | 1863826..1864647 | + | 822 | WP_101973509.1 | antitermination protein | - |
| CFI09_RS09320 () | 1864875..1865072 | + | 198 | WP_000917768.1 | hypothetical protein | - |
| CFI09_RS09325 () | 1865223..1866281 | + | 1059 | WP_101973510.1 | site-specific DNA-methyltransferase | - |
| CFI09_RS09350 () | 1866871..1867206 | - | 336 | WP_101973512.1 | anti-adapter protein IraM | - |
| CFI09_RS27520 () | 1867476..1869461 | + | 1986 | WP_199769547.1 | DUF1737 domain-containing protein | - |
| CFI09_RS09365 () | 1869616..1869801 | + | 186 | WP_033553189.1 | DUF1378 family protein | - |
| CFI09_RS09370 () | 1869824..1870099 | + | 276 | WP_199769553.1 | DUF826 domain-containing protein | - |
| CFI09_RS09375 () | 1870177..1870392 | + | 216 | WP_087906417.1 | class II holin family protein | - |
| CFI09_RS09380 () | 1870397..1870930 | + | 534 | WP_101973515.1 | lysozyme | - |
| CFI09_RS09385 () | 1871152..1871265 | + | 114 | WP_000675931.1 | hypothetical protein | - |
| CFI09_RS27165 () | 1871653..1871838 | + | 186 | WP_158639715.1 | Rz1 family lipoprotein | - |
| CFI09_RS09395 () | 1871924..1872148 | + | 225 | WP_033552860.1 | hypothetical protein | - |
| CFI09_RS09400 () | 1872869..1873091 | + | 223 | Protein_1727 | hypothetical protein | - |
| CFI09_RS09405 () | 1873158..1873328 | - | 171 | WP_101973517.1 | YlcI/YnfO family protein | - |
| CFI09_RS09410 () | 1873371..1873736 | + | 366 | WP_101973518.1 | HNH endonuclease | - |
| CFI09_RS09420 () | 1874030..1874593 | + | 564 | WP_101973519.1 | terminase small subunit | - |
| CFI09_RS09425 () | 1874590..1876251 | + | 1662 | WP_101973520.1 | terminase large subunit | - |
| CFI09_RS09430 () | 1876315..1878252 | + | 1938 | WP_101973521.1 | phage major capsid protein | - |
| CFI09_RS09435 () | 1878297..1878518 | + | 222 | WP_101973522.1 | hypothetical protein | - |
| CFI09_RS09440 () | 1878464..1880886 | + | 2423 | Protein_1734 | phage portal protein | - |
| CFI09_RS09445 () | 1880883..1881209 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| CFI09_RS09450 () | 1881220..1881570 | + | 351 | WP_101973523.1 | phage head closure protein | - |
| CFI09_RS09455 () | 1881567..1882013 | + | 447 | WP_101973524.1 | HK97 gp10 family phage protein | - |
| CFI09_RS09460 () | 1882010..1882354 | + | 345 | WP_101973525.1 | DUF3168 domain-containing protein | - |
| CFI09_RS09465 () | 1882414..1883130 | + | 717 | WP_101973526.1 | immunoglobulin domain-containing protein | - |
| CFI09_RS09470 () | 1883145..1883519 | + | 375 | WP_101973527.1 | phage tail assembly chaperone | - |
| CFI09_RS09475 () | 1883615..1883824 | + | 210 | WP_158639738.1 | DUF4035 domain-containing protein | - |
| CFI09_RS09480 () | 1883900..1884301 | + | 402 | WP_199769548.1 | hypothetical protein | - |
| CFI09_RS09485 () | 1884365..1887610 | + | 3246 | WP_101973530.1 | phage tail tape measure protein | - |
| CFI09_RS09490 () | 1887603..1887944 | + | 342 | WP_101973868.1 | phage tail protein | - |
| CFI09_RS09495 () | 1887944..1888642 | + | 699 | WP_101973531.1 | phage minor tail protein L | - |
| CFI09_RS09500 () | 1888648..1889391 | + | 744 | WP_101973532.1 | C40 family peptidase | - |
| CFI09_RS09505 () | 1889337..1889969 | + | 633 | WP_158639739.1 | tail assembly protein | - |
| CFI09_RS09510 () | 1890222..1893608 | + | 3387 | WP_101973534.1 | host specificity protein J | - |
| CFI09_RS09515 () | 1893676..1894275 | + | 600 | WP_101973535.1 | Attachment invasion locus protein | VF |
| CFI09_RS09520 () | 1894339..1895397 | + | 1059 | WP_101973536.1 | ISNCY family transposase KIS | Transposase |
| CFI09_RS09525 () | 1895426..1896013 | + | 588 | WP_199769550.1 | DUF4376 domain-containing protein | - |
| CFI09_RS27170 () | 1896171..1896374 | - | 204 | WP_158639716.1 | hypothetical protein | - |
| CFI09_RS09535 () | 1896572..1896793 | - | 222 | WP_101973538.1 | hypothetical protein | - |
| CFI09_RS09540 () | 1897355..1898485 | + | 1131 | WP_101973539.1 | Adhesin YadA | VF |
| CFI09_RS09545 () | 1898577..1899104 | + | 528 | WP_101973540.1 | hypothetical protein | - |
| CFI09_RS09550 () | 1899348..1899680 | - | 333 | WP_101973541.1 | YkgJ family cysteine cluster protein | - |
| CFI09_RS09555 () | 1900004..1901029 | - | 1026 | WP_044190935.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CFI09_RS09560 () | 1901029..1901232 | - | 204 | WP_087614020.1 | DUF4224 domain-containing protein | - |
| CFI09_RS09565 () | 1901291..1903726 | - | 2436 | WP_101973493.1 | exonuclease | - |
| CFI09_RS09570 () | 1903822..1904010 | - | 189 | WP_101973494.1 | DUF1482 family protein | - |
| CFI09_RS09575 () | 1904007..1904195 | - | 189 | WP_101973495.1 | cell division inhibitor | - |
| CFI09_RS27525 () | 1904747..1904968 | + | 222 | WP_000157196.1 | hypothetical protein | - |
| CFI09_RS09595 () | 1904958..1905338 | - | 381 | WP_101973863.1 | hypothetical protein | - |
| CFI09_RS09600 () | 1905350..1905502 | - | 153 | WP_101973496.1 | DUF1391 family protein | - |
| CFI09_RS09605 () | 1905770..1906189 | - | 420 | WP_000362152.1 | hypothetical protein | - |
| CFI09_RS09610 () | 1906290..1906571 | + | 282 | WP_000391948.1 | helix-turn-helix domain-containing protein | - |
| CFI09_RS09615 () | 1906555..1906980 | + | 426 | WP_000693883.1 | Rha family transcriptional regulator | - |
| CFI09_RS09620 () | 1907052..1908122 | + | 1071 | WP_101973542.1 | phage replisome organizer | - |
| CFI09_RS09625 () | 1908163..1908573 | + | 411 | WP_101973543.1 | DUF977 family protein | - |
| CFI09_RS09630 () | 1908947..1911238 | + | 2292 | WP_101973544.1 | AAA family ATPase | - |
| CFI09_RS09635 () | 1911773..1911928 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CFI09_RS09640 () | 1912072..1912464 | + | 393 | WP_000737636.1 | hypothetical protein | - |
| CFI09_RS09645 () | 1912761..1913039 | + | 279 | WP_001345469.1 | hypothetical protein | - |
| CFI09_RS09650 () | 1913041..1914096 | + | 1056 | WP_101973545.1 | DUF968 domain-containing protein | - |
| CFI09_RS09655 () | 1914097..1914477 | + | 381 | WP_101973546.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CFI09_RS09660 () | 1914474..1915295 | + | 822 | WP_000762902.1 | antitermination protein | - |
| CFI09_RS09665 () | 1915533..1915895 | + | 363 | Protein_1777 | tellurite resistance TerB family protein | - |
| CFI09_RS27180 () | 1915892..1916023 | + | 132 | WP_001344632.1 | DUF3927 family protein | - |
| CFI09_RS09675 () | 1916468..1918318 | + | 1851 | WP_101973547.1 | DUF1737 domain-containing protein | - |
| CFI09_RS09685 () | 1918762..1918968 | + | 207 | WP_000411813.1 | class II holin family protein | - |
| CFI09_RS27530 () | 1918973..1919960 | + | 988 | Protein_1781 | YdfR family protein | - |
| CFI09_RS09700 () | 1919997..1920530 | + | 534 | WP_096853710.1 | lysozyme | - |
| CFI09_RS09710 () | 1921085..1921171 | + | 87 | WP_032140280.1 | hypothetical protein | - |
| CFI09_RS27190 () | 1921393..1921578 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| CFI09_RS09725 () | 1922106..1922420 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| CFI09_RS09730 () | 1922502..1922726 | - | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| CFI09_RS09740 () | 1923115..1923660 | + | 546 | WP_000453576.1 | DNA-packaging protein | - |
| CFI09_RS09745 () | 1923635..1925560 | + | 1926 | WP_101973549.1 | phage terminase large subunit family protein | - |
| CFI09_RS09750 () | 1925557..1925763 | + | 207 | WP_000198149.1 | gpW family protein | - |
| CFI09_RS09755 () | 1925760..1927361 | + | 1602 | WP_001324962.1 | phage portal protein | - |
| CFI09_RS09760 () | 1927342..1928661 | + | 1320 | WP_000123236.1 | S49 family peptidase | - |
| CFI09_RS09765 () | 1928671..1929003 | + | 333 | WP_001299443.1 | head decoration protein | - |
| CFI09_RS09770 () | 1929059..1930084 | + | 1026 | WP_000063260.1 | major capsid protein | - |
| CFI09_RS09775 () | 1930126..1930521 | + | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| CFI09_RS09780 () | 1930533..1930886 | + | 354 | WP_000753019.1 | head-tail joining protein | - |
| CFI09_RS09785 () | 1930898..1931476 | + | 579 | WP_000975054.1 | phage tail protein | - |
| CFI09_RS09790 () | 1931473..1931868 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| CFI09_RS09795 () | 1931876..1932616 | + | 741 | WP_001349920.1 | phage tail protein | - |
| CFI09_RS09800 () | 1932632..1933054 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CFI09_RS09805 () | 1933036..1933470 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| CFI09_RS09810 () | 1933463..1936024 | + | 2562 | WP_000840258.1 | phage tail tape measure protein | - |
| CFI09_RS09815 () | 1936021..1936350 | + | 330 | WP_000847401.1 | phage tail protein | - |
| CFI09_RS09820 () | 1936350..1937048 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| CFI09_RS09825 () | 1937054..1937797 | + | 744 | WP_101973550.1 | C40 family peptidase | - |
| CFI09_RS09830 () | 1937734..1938366 | + | 633 | WP_158639717.1 | tail assembly protein | - |
| CFI09_RS09835 () | 1938427..1941906 | + | 3480 | WP_101973552.1 | host specificity protein J | - |
| CFI09_RS09840 () | 1941974..1942573 | + | 600 | WP_101973553.1 | Outer membrane protein X | VF |
| CFI09_RS09845 () | 1942638..1944224 | + | 1587 | WP_158639718.1 | ISNCY family transposase KIS | Transposase |
| CFI09_RS09855 () | 1944335..1944916 | + | 582 | WP_001118092.1 | hypothetical protein | VF |
| CFI09_RS09860 () | 1944989..1945618 | + | 630 | WP_001359536.1 | hypothetical protein | VF |
| CFI09_RS09865 () | 1945700..1946341 | + | 642 | WP_001143784.1 | hypothetical protein | VF |
| CFI09_RS09880 () | 1947076..1947912 | + | 837 | WP_101973555.1 | hypothetical protein | - |
| CFI09_RS09885 () | 1948129..1948347 | + | 219 | WP_001519863.1 | AlpA family transcriptional regulator | - |
| CFI09_RS09890 () | 1948429..1948719 | + | 291 | WP_101973556.1 | hypothetical protein | - |
| CFI09_RS09895 () | 1948772..1949068 | + | 297 | WP_101973557.1 | hypothetical protein | - |
| CFI09_RS09900 () | 1949142..1949384 | + | 243 | WP_101973558.1 | DNA-binding protein | - |
| CFI09_RS09905 () | 1949493..1949843 | + | 351 | WP_101973559.1 | hypothetical protein | - |
| CFI09_RS09910 () | 1949908..1950312 | - | 405 | WP_001287374.1 | H-NS histone family protein | - |
| CFI09_RS09915 () | 1950470..1950949 | - | 480 | WP_044706493.1 | DUF4756 family protein | - |
| CFI09_RS09920 () | 1951104..1951649 | - | 546 | WP_001519857.1 | replication/maintenance protein RepL | - |
| CFI09_RS09925 () | 1952552..1952821 | + | 270 | WP_024009117.1 | hypothetical protein | - |
| CFI09_RS09930 () | 1952905..1953291 | + | 387 | WP_101973560.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|