MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47164 bp
Accession: NZ_CP022276 Location: 1..47164 Organism: Citrobacter freundii strain 18-1 Replicon: plasmid pCKPC18-1
Accession: NZ_CP022276 Location: 1..47164 Organism: Citrobacter freundii strain 18-1 Replicon: plasmid pCKPC18-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFA70_RS28400 () | 92..571 | - | 480 | Protein_0 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CFA70_RS28410 () | 1037..1653 | + | 617 | Protein_1 | replication protein | - |
| CFA70_RS28415 () | 2183..2461 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| CFA70_RS28420 () | 2572..2996 | + | 425 | Protein_3 | antirestriction protein | - |
| CFA70_RS29435 () | 3124..3279 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| CFA70_RS29440 () | 3325..3621 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| CFA70_RS28430 () | 3725..4606 | + | 882 | Protein_6 | IS1182 family transposase ISKpn6 | Transposase |
| CFA70_RS28435 () | 4856..5737 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| CFA70_RS28440 () | 6013..6993 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| CFA70_RS28445 () | 7116..7673 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CFA70_RS28450 () | 7836..10841 | + | 3006 | WP_013213984.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CFA70_RS29190 () | 10978..11151 | + | 174 | WP_020956915.1 | hypothetical protein | - |
| CFA70_RS28455 () | 11156..11674 | - | 519 | WP_020956914.1 | DUF2726 domain-containing protein | - |
| CFA70_RS28460 () | 11687..12046 | - | 360 | WP_020956913.1 | hypothetical protein | - |
| CFA70_RS28465 () | 12148..12579 | - | 432 | WP_041937903.1 | hypothetical protein | - |
| CFA70_RS28470 () | 12579..13559 | - | 981 | WP_024130064.1 | replication initiator protein A | - |
| CFA70_RS28475 () | 14273..14479 | - | 207 | Protein_16 | hypothetical protein | - |
| CFA70_RS28480 () | 14587..15111 | + | 525 | WP_020956910.1 | J domain-containing protein | - |
| CFA70_RS28485 () | 15202..15744 | + | 543 | WP_020956909.1 | hypothetical protein | - |
| CFA70_RS28490 () | 15741..15986 | + | 246 | WP_020956908.1 | hypothetical protein | - |
| CFA70_RS28495 () | 15983..16204 | + | 222 | WP_020956907.1 | helix-turn-helix domain-containing protein | - |
| CFA70_RS28500 () | 16209..16490 | + | 282 | WP_088912116.1 | hypothetical protein | - |
| CFA70_RS28505 () | 16874..17086 | + | 213 | WP_020956906.1 | hypothetical protein | - |
| CFA70_RS28510 () | 17132..17392 | + | 261 | WP_070749909.1 | hypothetical protein | - |
| CFA70_RS28515 () | 17696..17920 | + | 225 | WP_020956904.1 | hypothetical protein | Antitoxin Detail |
| CFA70_RS28520 () | 17932..18207 | + | 276 | WP_020956903.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CFA70_RS28525 () | 18229..18495 | + | 267 | WP_020956902.1 | hypothetical protein | - |
| CFA70_RS28530 () | 18936..19490 | + | 555 | WP_020956901.1 | hypothetical protein | - |
| CFA70_RS28535 () | 19492..20682 | + | 1191 | WP_041937886.1 | hypothetical protein | Relaxase |
| CFA70_RS28540 () | 20712..21038 | - | 327 | WP_030003464.1 | helix-turn-helix domain-containing protein | - |
| CFA70_RS28545 () | 21258..21896 | + | 639 | WP_020956900.1 | Type IV secretion system protein virB1 | VF |
| CFA70_RS28550 () | 21883..22170 | + | 288 | WP_020956899.1 | TrbC/VirB2 family protein | - |
| CFA70_RS28555 () | 22189..24948 | + | 2760 | WP_020956898.1 | Type IV secretion system protein virB4 | VF |
| CFA70_RS28560 () | 24960..25706 | + | 747 | WP_030003463.1 | VirB5 like protein | - |
| CFA70_RS28565 () | 25714..25971 | + | 258 | WP_051245713.1 | EexN family lipoprotein | - |
| CFA70_RS28570 () | 25985..27061 | + | 1077 | WP_020956897.1 | type IV secretion system protein | - |
| CFA70_RS28575 () | 27064..27201 | + | 138 | WP_088903450.1 | conjugal transfer protein | - |
| CFA70_RS28580 () | 27188..27412 | + | 225 | WP_179239911.1 | hypothetical protein | - |
| CFA70_RS28585 () | 27428..30325 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| CFA70_RS28590 () | 30420..31025 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| CFA70_RS28595 () | 31056..31598 | + | 543 | Protein_40 | type IV secretion system protein | - |
| CFA70_RS28600 () | 31603..32523 | + | 921 | WP_020956895.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CFA70_RS28605 () | 32835..34031 | + | 1197 | WP_041937897.1 | Type IV secretion system protein virB10 | VF |
| CFA70_RS28610 () | 34057..35093 | + | 1037 | Protein_43 | Type IV secretion system protein VirB11 | VF |
| CFA70_RS28615 () | 35095..37062 | + | 1968 | WP_020956892.1 | Protein VirD4 | VF |
| CFA70_RS28620 () | 37072..37458 | + | 387 | WP_020956891.1 | hypothetical protein | - |
| CFA70_RS28625 () | 37461..37853 | + | 393 | WP_020956890.1 | cag pathogenicity island Cag12 family protein | - |
| CFA70_RS28630 () | 37996..38205 | + | 210 | WP_041937894.1 | hypothetical protein | - |
| CFA70_RS28635 () | 38349..39095 | + | 747 | WP_020956888.1 | hypothetical protein | - |
| CFA70_RS28640 () | 39101..41500 | + | 2400 | WP_020956887.1 | type IA DNA topoisomerase | - |
| CFA70_RS28645 () | 41507..41713 | + | 207 | WP_041937892.1 | hemolysin activation protein | - |
| CFA70_RS28650 () | 41772..42242 | + | 471 | WP_020956885.1 | H-NS histone family protein | - |
| CFA70_RS28655 () | 42499..43143 | + | 645 | WP_020956884.1 | AAA family ATPase | - |
| CFA70_RS28660 () | 43224..43508 | + | 285 | WP_041937885.1 | hypothetical protein | - |
| CFA70_RS28665 () | 43625..46591 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CFA70_RS28670 () | 46595..47155 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|