MGE detailed information
MGE type: Conjugative plasmid MGE length: 144825 bp
Accession: NZ_CP022275 Location: 1..144825 Organism: Citrobacter freundii strain 18-1 Replicon: plasmid pBKPC18-1
Accession: NZ_CP022275 Location: 1..144825 Organism: Citrobacter freundii strain 18-1 Replicon: plasmid pBKPC18-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFA70_RS29400 () | 159..326 | - | 168 | WP_198314305.1 | hypothetical protein | - |
| CFA70_RS27580 () | 324..1021 | - | 698 | Protein_1 | plasmid SOS inhibition protein A | - |
| CFA70_RS27585 () | 1018..1334 | - | 317 | Protein_2 | conjugation system SOS inhibitor PsiB | - |
| CFA70_RS27590 () | 1481..3475 | - | 1995 | Protein_3 | ParB/RepB/Spo0J family partition protein | - |
| CFA70_RS27595 () | 3546..3793 | - | 248 | Protein_4 | DUF905 family protein | - |
| CFA70_RS27600 () | 3842..4399 | - | 558 | WP_075606930.1 | single-stranded DNA-binding protein | - |
| CFA70_RS27610 () | 5043..5363 | - | 321 | WP_049077843.1 | hypothetical protein | - |
| CFA70_RS27615 () | 5388..5651 | - | 264 | WP_032425679.1 | DNA polymerase III subunit theta | - |
| CFA70_RS27620 () | 5852..6043 | - | 192 | WP_000761848.1 | hypothetical protein | - |
| CFA70_RS27625 () | 6086..6592 | - | 507 | WP_048757065.1 | antirestriction protein ArdA | - |
| CFA70_RS27630 () | 6637..7065 | - | 429 | WP_048757062.1 | antirestriction protein | - |
| CFA70_RS27640 () | 7504..8271 | - | 768 | WP_032743901.1 | hypothetical protein | - |
| CFA70_RS27645 () | 8323..8733 | - | 411 | WP_032743904.1 | DUF1380 family protein | - |
| CFA70_RS27650 () | 8780..9001 | - | 222 | WP_053390281.1 | hypothetical protein | - |
| CFA70_RS27655 () | 9001..9702 | - | 702 | WP_080884168.1 | DNA methylase | - |
| CFA70_RS27660 () | 10086..10421 | - | 336 | WP_080884169.1 | hypothetical protein | - |
| CFA70_RS27665 () | 10418..10651 | - | 234 | WP_080884170.1 | hypothetical protein | - |
| CFA70_RS27670 () | 11086..11316 | - | 231 | WP_032693967.1 | hypothetical protein | - |
| CFA70_RS27675 () | 11526..11951 | + | 426 | WP_032693966.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CFA70_RS27680 () | 11951..12262 | + | 312 | Protein_19 | DNA polymerase V subunit UmuC | - |
| CFA70_RS27685 () | 12336..13625 | + | 1290 | WP_034039555.1 | site-specific integrase | - |
| CFA70_RS27690 () | 13618..15348 | + | 1731 | WP_034039553.1 | site-specific integrase | - |
| CFA70_RS29405 () | 15345..17384 | + | 2040 | WP_034039551.1 | hypothetical protein | - |
| CFA70_RS27700 () | 17407..17829 | + | 423 | WP_003152689.1 | hypothetical protein | - |
| CFA70_RS27705 () | 17897..20587 | - | 2691 | WP_088903430.1 | AAA family ATPase | - |
| CFA70_RS27710 () | 21028..21585 | - | 558 | WP_088903444.1 | transcriptional regulator | - |
| CFA70_RS27715 () | 21631..22605 | + | 975 | WP_088903445.1 | IS5 family transposase | - |
| CFA70_RS27720 () | 22919..24082 | + | 1164 | WP_088903431.1 | multidrug efflux RND transporter periplasmic adaptor subunit TMexC1 | - |
| CFA70_RS27725 () | 24098..27232 | + | 3135 | WP_027591160.1 | multidrug efflux RND transporter permease subunit TMexD1 | - |
| CFA70_RS27730 () | 27252..28670 | + | 1419 | WP_137922721.1 | multidrug efflux transporter outer membrane subunit TOprJ1 | - |
| CFA70_RS29180 () | 28840..28989 | - | 150 | WP_155275771.1 | hypothetical protein | - |
| CFA70_RS27735 () | 29100..30074 | + | 975 | Protein_31 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CFA70_RS27740 () | 30241..30492 | + | 252 | WP_032693964.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CFA70_RS27745 () | 30489..30776 | + | 288 | WP_032693963.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CFA70_RS27750 () | 30841..31047 | + | 207 | WP_088903433.1 | hypothetical protein | - |
| CFA70_RS27760 () | 31862..32893 | - | 1032 | WP_001752311.1 | IS630-like element ISEc33 family transposase | - |
| CFA70_RS27765 () | 32979..33449 | + | 471 | WP_088903435.1 | hypothetical protein | - |
| CFA70_RS27770 () | 33725..34117 | - | 393 | WP_080884174.1 | plasmid partitioning/stability family protein | - |
| CFA70_RS27775 () | 34121..35095 | - | 975 | WP_080884175.1 | StbA family protein | - |
| CFA70_RS27780 () | 35335..35709 | - | 375 | WP_088903436.1 | hypothetical protein | - |
| CFA70_RS27785 () | 35709..36341 | - | 633 | WP_080884176.1 | ParA family protein | - |
| CFA70_RS27790 () | 37329..38084 | - | 756 | WP_042078022.1 | replication initiation protein RepE | - |
| CFA70_RS27795 () | 38615..39355 | - | 741 | WP_164876890.1 | site-specific integrase | - |
| CFA70_RS27800 () | 39406..39741 | - | 336 | WP_080884178.1 | hypothetical protein | - |
| CFA70_RS27805 () | 39863..40180 | - | 318 | WP_164876889.1 | hypothetical protein | - |
| CFA70_RS29410 () | 40373..40570 | - | 198 | Protein_45 | hypothetical protein | - |
| CFA70_RS27815 () | 40710..41399 | + | 690 | WP_004193995.1 | hypothetical protein | - |
| CFA70_RS27820 () | 41431..42120 | - | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| CFA70_RS27825 () | 42556..42804 | + | 249 | WP_000272716.1 | hypothetical protein | - |
| CFA70_RS27830 () | 42801..43373 | + | 573 | WP_020805590.1 | hypothetical protein | - |
| CFA70_RS27835 () | 43404..43898 | + | 495 | WP_020805591.1 | hypothetical protein | - |
| CFA70_RS27840 () | 43942..44310 | + | 369 | WP_004197807.1 | hypothetical protein | - |
| CFA70_RS27845 () | 44344..44547 | + | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| CFA70_RS27850 () | 44561..44764 | + | 204 | WP_004197809.1 | hypothetical protein | - |
| CFA70_RS27855 () | 44946..45950 | - | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| CFA70_RS27860 () | 46029..48995 | - | 2967 | WP_003100881.1 | Tn3-like element ISPa38 family transposase | - |
| CFA70_RS27865 () | 49070..49360 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| CFA70_RS27870 () | 49357..49758 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| CFA70_RS27875 () | 49748..50104 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| CFA70_RS27880 () | 50359..50673 | + | 315 | WP_000091613.1 | hypothetical protein | - |
| CFA70_RS27885 () | 51100..52281 | - | 1182 | WP_004194048.1 | Na+/H+ antiporter NhaA | - |
| CFA70_RS27895 () | 52941..53546 | - | 606 | WP_000509966.1 | recombinase family protein | - |
| CFA70_RS27900 () | 53641..56538 | + | 2898 | WP_023307208.1 | Tn3-like element Tn5403 family transposase | - |
| CFA70_RS27905 () | 56568..57158 | - | 591 | Protein_63 | DNA methylase | - |
| CFA70_RS27910 () | 57230..57423 | - | 194 | Protein_64 | hypothetical protein | - |
| CFA70_RS27915 () | 57593..57823 | - | 231 | WP_020314631.1 | hypothetical protein | - |
| CFA70_RS27920 () | 58027..58272 | + | 246 | WP_020314635.1 | DinI-like family protein | - |
| CFA70_RS27925 () | 58269..58718 | + | 450 | WP_046960466.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CFA70_RS27930 () | 58730..60004 | + | 1275 | WP_020314652.1 | Y-family DNA polymerase | - |
| CFA70_RS27935 () | 60187..60414 | - | 228 | WP_020314634.1 | hypothetical protein | - |
| CFA70_RS27940 () | 60459..61085 | - | 627 | WP_022644718.1 | ParA family protein | - |
| CFA70_RS27945 () | 61990..62508 | + | 519 | WP_088903439.1 | hypothetical protein | - |
| CFA70_RS27950 () | 62761..63357 | + | 597 | WP_032635043.1 | recombinase family protein | - |
| CFA70_RS27955 () | 63463..66216 | - | 2754 | WP_075606932.1 | ABC transporter | - |
| CFA70_RS27970 () | 67798..68994 | + | 1197 | WP_088903440.1 | type II restriction endonuclease | - |
| CFA70_RS27975 () | 69029..70432 | - | 1404 | WP_164722696.1 | DNA cytosine methyltransferase | - |
| CFA70_RS27980 () | 70841..71461 | + | 621 | WP_020314642.1 | recombinase family protein | - |
| CFA70_RS27985 () | 71481..71744 | + | 264 | WP_088903441.1 | hypothetical protein | - |
| CFA70_RS27990 () | 71869..72822 | + | 954 | WP_020314639.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CFA70_RS27995 () | 72819..73430 | - | 612 | WP_020804876.1 | DUF2913 family protein | - |
| CFA70_RS28000 () | 73748..74026 | - | 279 | WP_020314648.1 | hypothetical protein | - |
| CFA70_RS28005 () | 74064..74405 | - | 342 | WP_088903446.1 | HNH endonuclease | - |
| CFA70_RS28010 () | 74452..77457 | - | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| CFA70_RS28015 () | 77620..78177 | + | 558 | WP_001217881.1 | recombinase family protein | - |
| CFA70_RS28020 () | 78300..79280 | + | 981 | WP_013213985.1 | IS481-like element ISKpn27 family transposase | - |
| CFA70_RS28025 () | 79556..80437 | + | 882 | WP_004199234.1 | carbapenem-hydrolyzing class A beta-lactamase KPC-2 | - |
| CFA70_RS28030 () | 80687..81568 | - | 882 | Protein_87 | IS1182-like element ISKpn6 family transposase | - |
| CFA70_RS29415 () | 81672..81968 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| CFA70_RS29420 () | 82014..82169 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| CFA70_RS28040 () | 82297..82722 | - | 426 | WP_088903442.1 | antirestriction protein | - |
| CFA70_RS28045 () | 82833..83111 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| CFA70_RS28055 () | 83645..84262 | - | 618 | Protein_92 | replication protein | - |
| CFA70_RS28060 () | 84641..86758 | + | 2118 | WP_088903447.1 | DUF499 domain-containing protein | - |
| CFA70_RS28065 () | 86758..87777 | + | 1020 | WP_040227127.1 | hypothetical protein | - |
| CFA70_RS28070 () | 87784..88860 | + | 1077 | WP_040228241.1 | SIR2 family protein | - |
| CFA70_RS28075 () | 88868..90661 | + | 1794 | WP_064176592.1 | ATP-binding protein | - |
| CFA70_RS28080 () | 90672..93887 | + | 3216 | WP_040228246.1 | DUF1156 domain-containing protein | - |
| CFA70_RS28085 () | 93887..94387 | + | 501 | WP_040228248.1 | hypothetical protein | - |
| CFA70_RS28090 () | 94397..97204 | + | 2808 | WP_040228250.1 | DEAD/DEAH box helicase family protein | - |
| CFA70_RS28095 () | 97534..97713 | - | 180 | Protein_100 | SOS response-associated peptidase | - |
| CFA70_RS29425 () | 98062..98220 | + | 159 | WP_186763610.1 | hypothetical protein | - |
| CFA70_RS28105 () | 98698..99717 | - | 1020 | WP_009652816.1 | replication initiation protein | - |
| CFA70_RS28110 () | 99710..99787 | - | 78 | WP_009652807.1 | RepA leader peptide Tap | - |
| CFA70_RS28120 () | 100011..100277 | - | 267 | WP_042927547.1 | replication regulatory protein RepA | - |
| CFA70_RS28125 () | 100410..100976 | - | 567 | WP_052544827.1 | phospholipase D family protein | - |
| CFA70_RS28130 () | 100973..101599 | - | 627 | WP_009652809.1 | DUF2726 domain-containing protein | - |
| CFA70_RS28135 () | 101655..102299 | - | 645 | WP_042927545.1 | hypothetical protein | - |
| CFA70_RS28140 () | 102369..102965 | - | 597 | WP_042927543.1 | hypothetical protein | - |
| CFA70_RS28145 () | 103095..103886 | - | 792 | WP_075606913.1 | DsbA family protein | - |
| CFA70_RS28150 () | 104036..104626 | - | 591 | WP_009651737.1 | fertility inhibition protein FinO | - |
| CFA70_RS28155 () | 104783..105508 | - | 726 | WP_064386205.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CFA70_RS28160 () | 105591..110849 | - | 5259 | WP_075606914.1 | conjugative transfer relaxase/helicase TraI | - |
| CFA70_RS28165 () | 110849..113167 | - | 2319 | WP_075606915.1 | type IV conjugative transfer system coupling protein TraD | - |
| CFA70_RS28170 () | 113286..113672 | - | 387 | WP_053390238.1 | hypothetical protein | - |
| CFA70_RS28175 () | 114224..114895 | - | 672 | WP_088883382.1 | hypothetical protein | - |
| CFA70_RS28180 () | 114912..117767 | - | 2856 | WP_075606917.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CFA70_RS28185 () | 117767..119137 | - | 1371 | WP_075606918.1 | conjugal transfer protein TraH | - |
| CFA70_RS28190 () | 119124..119684 | - | 561 | WP_039698500.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CFA70_RS28195 () | 119659..119895 | - | 237 | WP_053390221.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CFA70_RS28200 () | 119906..120658 | - | 753 | WP_053390220.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CFA70_RS28205 () | 120679..121005 | - | 327 | WP_053390219.1 | hypothetical protein | - |
| CFA70_RS28210 () | 121051..121293 | - | 243 | WP_082226157.1 | conjugal transfer protein TrbE | - |
| CFA70_RS28215 () | 121283..121894 | - | 612 | WP_053390217.1 | hypothetical protein | - |
| CFA70_RS28220 () | 121887..122147 | - | 261 | WP_053390216.1 | hypothetical protein | - |
| CFA70_RS28225 () | 122179..124134 | - | 1956 | WP_075606920.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CFA70_RS28230 () | 124131..124757 | - | 627 | WP_075606921.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CFA70_RS28235 () | 124770..125762 | - | 993 | WP_032736858.1 | conjugal transfer pilus assembly protein TraU | - |
| CFA70_RS28240 () | 125773..126399 | - | 627 | WP_060415482.1 | type-F conjugative transfer system protein TraW | - |
| CFA70_RS28245 () | 126396..126785 | - | 390 | WP_060415481.1 | type-F conjugative transfer system protein TrbI | - |
| CFA70_RS28250 () | 126785..129423 | - | 2639 | Protein_130 | type IV secretion system protein TraC | - |
| CFA70_RS28255 () | 129516..129872 | - | 357 | WP_075606923.1 | hypothetical protein | - |
| CFA70_RS28260 () | 129986..130285 | - | 300 | WP_053390307.1 | hypothetical protein | - |
| CFA70_RS28265 () | 130282..130500 | - | 219 | WP_088883385.1 | hypothetical protein | - |
| CFA70_RS28270 () | 130767..130955 | - | 189 | WP_053390294.1 | hypothetical protein | - |
| CFA70_RS28275 () | 130962..131240 | - | 279 | WP_053390295.1 | hypothetical protein | - |
| CFA70_RS28280 () | 131352..131921 | - | 570 | WP_075606925.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CFA70_RS28285 () | 131944..132453 | - | 510 | WP_053390298.1 | conjugal transfer protein TraP | - |
| CFA70_RS29430 () | 132533..133952 | - | 1420 | Protein_138 | conjugal transfer protein TraB | - |
| CFA70_RS28300 () | 133952..134686 | - | 735 | WP_053390198.1 | type-F conjugative transfer system secretin TraK | - |
| CFA70_RS28305 () | 134673..135239 | - | 567 | WP_053390197.1 | type IV conjugative transfer system protein TraE | - |
| CFA70_RS28310 () | 135259..135564 | - | 306 | WP_053390196.1 | type IV conjugative transfer system protein TraL | - |
| CFA70_RS28315 () | 135578..135946 | - | 369 | WP_053390195.1 | type IV conjugative transfer system pilin TraA | - |
| CFA70_RS28320 () | 136011..136172 | - | 162 | WP_172686697.1 | TraY domain-containing protein | - |
| CFA70_RS28325 () | 136366..137040 | - | 675 | WP_075606928.1 | hypothetical protein | - |
| CFA70_RS28330 () | 137279..137671 | - | 393 | WP_053390193.1 | relaxosome protein TraM | - |
| CFA70_RS28335 () | 138105..138599 | + | 495 | WP_053390245.1 | transglycosylase SLT domain-containing protein | - |
| CFA70_RS28340 () | 138622..139164 | - | 543 | WP_053390246.1 | antirestriction protein | - |
| CFA70_RS28350 () | 139813..140646 | - | 834 | WP_053390248.1 | N-6 DNA methylase | - |
| CFA70_RS28355 () | 140693..140923 | - | 231 | WP_032744242.1 | hypothetical protein | - |
| CFA70_RS28360 () | 141014..141361 | - | 348 | WP_053390249.1 | hypothetical protein | - |
| CFA70_RS28365 () | 141416..141754 | - | 339 | WP_053390250.1 | hypothetical protein | - |
| CFA70_RS28375 () | 142574..143449 | - | 876 | WP_022644946.1 | DUF4942 domain-containing protein | - |
| CFA70_RS28385 () | 143498..143728 | - | 231 | WP_020804025.1 | hypothetical protein | - |
| CFA70_RS28390 () | 143821..144048 | - | 228 | WP_022644716.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|