MGE detailed information
MGE type: Prophage MGE length: 87461 bp
Accession: NZ_CP022273 Location: 155775..243235 Organism: Citrobacter freundii strain 18-1 Replicon: chromosome
Accession: NZ_CP022273 Location: 155775..243235 Organism: Citrobacter freundii strain 18-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFA70_RS00840 () | 151267..151833 | + | 567 | WP_003034677.1 | VOC family protein | - |
| CFA70_RS00845 () | 151836..152582 | + | 747 | WP_088902153.1 | copper homeostasis protein CutC | - |
| CFA70_RS00855 () | 152826..153794 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CFA70_RS00860 () | 153791..154534 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| CFA70_RS00865 () | 154575..154970 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| CFA70_RS00870 () | 155023..155796 | - | 774 | WP_088902154.1 | DUF72 domain-containing protein | - |
| CFA70_RS00875 () | 155775..157088 | - | 1314 | WP_088902155.1 | site-specific integrase | - |
| CFA70_RS00880 () | 157144..157380 | - | 237 | WP_016150522.1 | excisionase family protein | - |
| CFA70_RS00890 () | 157536..157847 | - | 312 | WP_016150521.1 | hypothetical protein | - |
| CFA70_RS00895 () | 157847..158476 | - | 630 | WP_088902156.1 | hypothetical protein | - |
| CFA70_RS00900 () | 158473..158697 | - | 225 | WP_088902157.1 | hypothetical protein | - |
| CFA70_RS00905 () | 158694..159260 | - | 567 | WP_016150517.1 | hypothetical protein | - |
| CFA70_RS00910 () | 159257..160087 | - | 831 | WP_088902158.1 | DNA-binding protein | - |
| CFA70_RS00915 () | 160099..160605 | - | 507 | WP_088902159.1 | hypothetical protein | - |
| CFA70_RS00920 () | 160792..161043 | - | 252 | WP_088902160.1 | hypothetical protein | - |
| CFA70_RS00925 () | 161043..161399 | - | 357 | WP_088902161.1 | hypothetical protein | - |
| CFA70_RS00930 () | 161499..161789 | - | 291 | WP_088902162.1 | hypothetical protein | - |
| CFA70_RS00935 () | 161851..162096 | - | 246 | WP_050484865.1 | hypothetical protein | - |
| CFA70_RS00940 () | 162425..163087 | - | 663 | WP_167470000.1 | helix-turn-helix domain-containing protein | - |
| CFA70_RS00945 () | 163246..163506 | + | 261 | WP_088902164.1 | helix-turn-helix domain-containing protein | - |
| CFA70_RS00950 () | 163537..164364 | + | 828 | WP_088902165.1 | transporter | - |
| CFA70_RS00955 () | 164907..165257 | + | 351 | Protein_175 | helix-turn-helix domain-containing protein | - |
| CFA70_RS00960 () | 165272..166153 | + | 882 | WP_088902166.1 | ATP-binding protein | - |
| CFA70_RS00965 () | 166150..167508 | + | 1359 | WP_047721768.1 | replicative DNA helicase | - |
| CFA70_RS00970 () | 167519..167830 | + | 312 | WP_032652461.1 | hypothetical protein | - |
| CFA70_RS00975 () | 167827..168609 | + | 783 | WP_088902167.1 | antitermination protein | - |
| CFA70_RS00980 () | 168900..169586 | + | 687 | WP_088902168.1 | Rha family transcriptional regulator | - |
| CFA70_RS00985 () | 169702..170235 | + | 534 | WP_088902169.1 | hypothetical protein | - |
| CFA70_RS00990 () | 170681..170959 | + | 279 | WP_001568784.1 | holin | - |
| CFA70_RS00995 () | 170931..171479 | + | 549 | WP_088902170.1 | lysozyme | - |
| CFA70_RS01000 () | 171476..171991 | + | 516 | WP_167470001.1 | DUF2514 domain-containing protein | - |
| CFA70_RS01005 () | 171988..172218 | + | 231 | WP_000990801.1 | hypothetical protein | - |
| CFA70_RS01010 () | 172609..172806 | + | 198 | WP_024174517.1 | hypothetical protein | - |
| CFA70_RS01015 () | 172844..172999 | + | 156 | Protein_187 | DUF2514 family protein | - |
| CFA70_RS01020 () | 173379..173591 | + | 213 | WP_000066494.1 | cold shock protein CspG | - |
| CFA70_RS01025 () | 173602..173790 | + | 189 | WP_057069020.1 | hypothetical protein | - |
| CFA70_RS01030 () | 173864..174094 | + | 231 | WP_000756041.1 | hypothetical protein | - |
| CFA70_RS01035 () | 174299..174472 | + | 174 | WP_001100119.1 | addiction module toxin, GnsA/GnsB family | - |
| CFA70_RS01040 () | 175196..175423 | + | 228 | WP_088902172.1 | hypothetical protein | - |
| CFA70_RS01045 () | 175404..175643 | - | 240 | WP_088902173.1 | DUF1883 domain-containing protein | - |
| CFA70_RS01050 () | 175821..176459 | + | 639 | WP_072667361.1 | hypothetical protein | - |
| CFA70_RS01055 () | 176470..176973 | - | 504 | WP_032652440.1 | hypothetical protein | - |
| CFA70_RS01060 () | 177264..177833 | + | 570 | WP_000210383.1 | hypothetical protein | - |
| CFA70_RS01065 () | 177775..179898 | + | 2124 | WP_072667360.1 | phage terminase large subunit family protein | - |
| CFA70_RS01070 () | 179907..180170 | + | 264 | WP_000483309.1 | hypothetical protein | - |
| CFA70_RS01075 () | 180170..181807 | + | 1638 | WP_001045359.1 | phage portal protein | - |
| CFA70_RS01080 () | 181804..182670 | + | 867 | WP_001052909.1 | S49 family peptidase | - |
| CFA70_RS01085 () | 182672..183262 | + | 591 | WP_072667359.1 | hypothetical protein | - |
| CFA70_RS01090 () | 183262..183666 | + | 405 | WP_001472189.1 | head decoration protein | - |
| CFA70_RS01095 () | 183764..184813 | + | 1050 | WP_001472190.1 | major capsid protein | - |
| CFA70_RS01100 () | 184785..185195 | + | 411 | WP_001515588.1 | hypothetical protein | - |
| CFA70_RS01105 () | 185200..185559 | + | 360 | WP_000537794.1 | hypothetical protein | - |
| CFA70_RS01110 () | 185556..186101 | + | 546 | WP_072667357.1 | ATP-binding protein | - |
| CFA70_RS01115 () | 186105..186302 | + | 198 | WP_000497745.1 | DUF2635 domain-containing protein | - |
| CFA70_RS01120 () | 186299..187801 | + | 1503 | WP_023157310.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CFA70_RS01125 () | 187805..188176 | + | 372 | WP_000896638.1 | phage tail tube protein | - |
| CFA70_RS01130 () | 188178..188456 | + | 279 | WP_000807719.1 | phage tail assembly protein | - |
| CFA70_RS01135 () | 188598..190456 | + | 1859 | Protein_211 | hypothetical protein | - |
| CFA70_RS01140 () | 190800..192203 | + | 1404 | WP_001139208.1 | DNA circularization protein | - |
| CFA70_RS01145 () | 192200..193285 | + | 1086 | WP_001515585.1 | hypothetical protein | - |
| CFA70_RS01150 () | 193282..193866 | + | 585 | WP_023568807.1 | phage baseplate assembly protein | - |
| CFA70_RS01155 () | 193863..194300 | + | 438 | WP_001279799.1 | phage GP46 family protein | - |
| CFA70_RS01160 () | 194302..195444 | + | 1143 | WP_016237005.1 | baseplate J/gp47 family protein | - |
| CFA70_RS01165 () | 195441..196034 | + | 594 | WP_001515583.1 | YmfQ family protein | - |
| CFA70_RS01170 () | 196086..196409 | + | 324 | Protein_218 | hypothetical protein | - |
| CFA70_RS01175 () | 196781..197062 | + | 282 | WP_143759625.1 | hypothetical protein | - |
| CFA70_RS01180 () | 197055..197306 | + | 252 | WP_198314284.1 | tail fiber assembly protein | - |
| CFA70_RS01185 () | 197278..197694 | - | 417 | WP_088902175.1 | tail fiber assembly protein | - |
| CFA70_RS01190 () | 197697..198104 | - | 408 | WP_088902176.1 | hypothetical protein | - |
| CFA70_RS01195 () | 198134..198376 | - | 243 | WP_072667354.1 | DinI family protein | - |
| CFA70_RS01200 () | 198455..198844 | + | 390 | WP_024199385.1 | DNA polymerase V | - |
| CFA70_RS01205 () | 199439..200005 | - | 567 | WP_088902177.1 | hydrolase | - |
| CFA70_RS01210 () | 200294..202066 | + | 1773 | WP_032935372.1 | aspartate--tRNA ligase | - |
| CFA70_RS01215 () | 202068..202511 | + | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| CFA70_RS01220 () | 202540..203283 | + | 744 | WP_003034865.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CFA70_RS01225 () | 203318..203839 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CFA70_RS01230 () | 203920..204531 | + | 612 | WP_003844153.1 | Holliday junction branch migration protein RuvA | - |
| CFA70_RS01235 () | 204540..205550 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CFA70_RS01240 () | 205629..206414 | - | 786 | WP_003034874.1 | zinc ABC transporter permease subunit ZnuB | - |
| CFA70_RS01245 () | 206411..207166 | - | 756 | WP_003034877.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| CFA70_RS01250 () | 207245..208189 | + | 945 | WP_049002353.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CFA70_RS01255 () | 208205..209524 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| CFA70_RS01260 () | 209644..210615 | + | 972 | WP_003841672.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| CFA70_RS01265 () | 210659..212101 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| CFA70_RS01270 () | 212220..213089 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| CFA70_RS01280 () | 213457..214932 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| CFA70_RS01285 () | 215166..216977 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| CFA70_RS01290 () | 217012..217653 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CFA70_RS01295 () | 217720..218898 | - | 1179 | WP_003034904.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CFA70_RS01300 () | 219030..219320 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| CFA70_RS01305 () | 219442..219795 | + | 354 | WP_003034909.1 | protein YebF | - |
| CFA70_RS01310 () | 219890..220549 | + | 660 | WP_054528502.1 | tellurite resistance TerB family protein | - |
| CFA70_RS01315 () | 220636..222690 | + | 2055 | WP_174335232.1 | oligopeptidase B | - |
| CFA70_RS01320 () | 222681..223343 | - | 663 | WP_003841659.1 | exodeoxyribonuclease X | - |
| CFA70_RS01325 () | 223367..224023 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| CFA70_RS01330 () | 224130..224360 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| CFA70_RS01335 () | 224504..224878 | + | 375 | WP_044711069.1 | CopC domain-containing protein YobA | - |
| CFA70_RS01340 () | 224882..225754 | + | 873 | WP_049002332.1 | copper homeostasis membrane protein CopD | - |
| CFA70_RS01345 () | 225775..226113 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - () | 226234..226377 | - | 144 | - | - | Antitoxin Detail |
| - () | 226269..226372 | + | 104 | - | - | Toxin Detail |
| CFA70_RS01350 () | 226526..227167 | + | 642 | WP_058842357.1 | protein-serine/threonine phosphatase | - |
| CFA70_RS01355 () | 227168..227359 | - | 192 | WP_003034941.1 | YebW family protein | - |
| CFA70_RS01360 () | 227462..227698 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| CFA70_RS01365 () | 227799..229187 | - | 1389 | WP_058842375.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CFA70_RS01370 () | 229300..231933 | - | 2634 | WP_003034947.1 | PqiB family protein | - |
| CFA70_RS01375 () | 231902..233185 | - | 1284 | WP_088902180.1 | membrane integrity lipid transport subunit YebS | - |
| CFA70_RS01380 () | 233314..233811 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| CFA70_RS01385 () | 233908..234594 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| CFA70_RS01390 () | 234614..236662 | + | 2049 | WP_088902181.1 | carboxy terminal-processing peptidase | - |
| CFA70_RS01395 () | 236855..237736 | + | 882 | WP_003034964.1 | protease HtpX | - |
| CFA70_RS01400 () | 237783..239156 | - | 1374 | WP_048232221.1 | MFS transporter | - |
| CFA70_RS01405 () | 239331..240122 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| CFA70_RS01410 () | 240237..240476 | - | 240 | WP_088902182.1 | hypothetical protein | - |
| CFA70_RS01415 () | 240641..240817 | + | 177 | WP_088902183.1 | PhoP/PhoQ regulator MgrB | - |
| CFA70_RS01420 () | 240883..241830 | + | 948 | WP_031285326.1 | IS30 family transposase | - |
| CFA70_RS01425 () | 241949..242233 | + | 285 | WP_003841991.1 | YebO family protein | - |
| CFA70_RS01435 () | 242870..243013 | + | 144 | WP_003034983.1 | YobF family protein | - |
| CFA70_RS01440 () | 243026..243235 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CFA70_RS01445 () | 243455..245200 | + | 1746 | WP_088902184.1 | peptidoglycan glycosyltransferase FtsI | - |
| CFA70_RS01450 () | 245264..246073 | + | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CFA70_RS01455 () | 246070..246636 | - | 567 | WP_136345680.1 | manganese efflux pump MntP | - |
| CFA70_RS01465 () | 247069..247527 | - | 459 | WP_048216190.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|