MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 148077 bp
Accession: NZ_CP022264 Location: 1..148077 Organism: Xanthomonas citri pv. vignicola strain CFBP7111 Replicon: plasmid plA
Accession: NZ_CP022264 Location: 1..148077 Organism: Xanthomonas citri pv. vignicola strain CFBP7111 Replicon: plasmid plA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcvCFBP7111P_RS24525 () | 639..1079 | + | 441 | WP_089113656.1 | type IV pilus biogenesis protein PilM | - |
| XcvCFBP7111P_RS24530 () | 1311..1670 | + | 360 | WP_089113657.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24535 () | 1748..2386 | - | 639 | WP_089113658.1 | DotA/TraY family protein | - |
| XcvCFBP7111P_RS24545 () | 2846..4030 | - | 1185 | WP_089113660.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS24550 () | 4430..4933 | + | 504 | WP_089113661.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24555 () | 4923..5423 | + | 501 | WP_089113662.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24560 () | 5423..6559 | + | 1137 | WP_089113663.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24565 () | 6559..7389 | + | 831 | WP_089113664.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24570 () | 7386..8000 | + | 615 | WP_089113665.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24575 () | 7997..9001 | + | 1005 | WP_089113666.1 | M23 family metallopeptidase | - |
| XcvCFBP7111P_RS24580 () | 9085..10323 | + | 1239 | WP_089113667.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24585 () | 10320..10550 | + | 231 | WP_089113668.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24590 () | 10552..12111 | + | 1560 | WP_089113669.1 | DNA topoisomerase | - |
| XcvCFBP7111P_RS24595 () | 12173..12403 | + | 231 | WP_089113670.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24600 () | 12513..12938 | + | 426 | WP_089113671.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24605 () | 12942..14000 | + | 1059 | WP_089113672.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24610 () | 13997..14491 | + | 495 | WP_089113673.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24615 () | 14488..15171 | + | 684 | WP_089113758.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS24620 () | 15168..16319 | + | 1152 | WP_089113674.1 | IcmP-like type IV secretion system protein | - |
| XcvCFBP7111P_RS24625 () | 16300..17079 | + | 780 | WP_089113675.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24630 () | 17088..19619 | + | 2532 | WP_089113676.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS24635 () | 19616..20236 | + | 621 | WP_089113677.1 | YcbK family protein | - |
| XcvCFBP7111P_RS24640 () | 20224..21006 | + | 783 | WP_089113678.1 | thiol:disulfide interchange protein DsbG | - |
| XcvCFBP7111P_RS24645 () | 21052..21495 | + | 444 | WP_089113679.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24650 () | 21703..22788 | + | 1086 | WP_089113680.1 | DUF1738 domain-containing protein | - |
| XcvCFBP7111P_RS24655 () | 22824..23861 | + | 1038 | WP_208617471.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24660 () | 23883..25289 | + | 1407 | WP_167382373.1 | replicative DNA helicase | - |
| XcvCFBP7111P_RS26465 () | 25355..25543 | - | 189 | WP_157768229.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24665 () | 25807..26460 | + | 654 | WP_089113759.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24670 () | 26463..27446 | + | 984 | WP_089113682.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24675 () | 27509..30418 | + | 2910 | WP_089113683.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24680 () | 30418..31350 | + | 933 | WP_089113684.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24685 () | 31352..31891 | - | 540 | WP_089113685.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24690 () | 31888..33393 | - | 1506 | WP_089113760.1 | ATP-dependent helicase | - |
| XcvCFBP7111P_RS24695 () | 33438..33857 | - | 420 | WP_089113686.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24700 () | 33859..34062 | - | 204 | WP_089113687.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24705 () | 34205..34471 | - | 267 | WP_089113688.1 | EexN family lipoprotein | - |
| XcvCFBP7111P_RS24710 () | 34563..35624 | - | 1062 | WP_089113689.1 | DNA-binding protein | - |
| XcvCFBP7111P_RS24715 () | 35634..36497 | - | 864 | WP_089113690.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24720 () | 36509..36880 | - | 372 | WP_089113691.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24725 () | 36946..38619 | - | 1674 | WP_089113692.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24730 () | 38665..38967 | - | 303 | WP_089113693.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24735 () | 39791..40264 | + | 474 | WP_089113761.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24740 () | 40347..40925 | + | 579 | WP_089113694.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24745 () | 40925..41998 | + | 1074 | WP_089113695.1 | tyrosine-type recombinase/integrase | - |
| XcvCFBP7111P_RS24750 () | 42819..43253 | + | 435 | Protein_46 | IS5 family transposase ISXca5 | Transposase |
| XcvCFBP7111P_RS26835 () | 43378..45882 | - | 2505 | WP_208617472.1 | HAD hydrolase-like protein | - |
| XcvCFBP7111P_RS24765 () | 46272..47234 | + | 963 | WP_029996442.1 | IS1595 family transposase IS1595 | Transposase |
| XcvCFBP7111P_RS24770 () | 47410..48465 | - | 1056 | WP_014090219.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| XcvCFBP7111P_RS24775 () | 48649..49581 | + | 933 | Protein_50 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| XcvCFBP7111P_RS24780 () | 49626..52586 | + | 2961 | WP_089113696.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| XcvCFBP7111P_RS24785 () | 52695..54269 | + | 1575 | WP_089113697.1 | type IV secretion system DNA-binding domain-containing protein | - |
| XcvCFBP7111P_RS24790 () | 54283..57261 | + | 2979 | WP_089113698.1 | Multifunctional conjugation protein TraI | Relaxase |
| XcvCFBP7111P_RS24795 () | 57550..57834 | + | 285 | WP_003490829.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24800 () | 58020..59207 | - | 1188 | WP_029220895.1 | zeta toxin family protein | - |
| XcvCFBP7111P_RS24805 () | 59214..59501 | - | 288 | WP_029220894.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24810 () | 59527..59850 | - | 324 | WP_005917856.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XcvCFBP7111P_RS24815 () | 59847..60068 | - | 222 | WP_005917854.1 | antitoxin MazE family protein | Antitoxin Detail |
| XcvCFBP7111P_RS24820 () | 60266..60832 | + | 567 | WP_046932484.1 | Tn3 family transposase ISPsy42 | Transposase |
| XcvCFBP7111P_RS24825 () | 61061..61711 | + | 651 | WP_089113699.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| XcvCFBP7111P_RS24830 () | 61786..62139 | + | 354 | WP_089113700.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24840 () | 63045..64189 | + | 1145 | WP_089111531.1 | IS3 family transposase ISXac3 | Transposase |
| XcvCFBP7111P_RS24855 () | 64731..65042 | - | 312 | WP_089113702.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24860 () | 65063..65761 | - | 699 | WP_011795799.1 | UPF0149 family protein | - |
| XcvCFBP7111P_RS24865 () | 65780..66832 | - | 1053 | Protein_65 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| XcvCFBP7111P_RS26720 () | 67089..67304 | - | 216 | WP_017170293.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24880 () | 68184..68363 | + | 180 | Protein_67 | hypothetical protein | - |
| XcvCFBP7111P_RS24885 () | 68364..68570 | + | 207 | WP_089113763.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24890 () | 68799..68978 | + | 180 | Protein_69 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| XcvCFBP7111P_RS24895 () | 69133..70220 | + | 1088 | WP_089111307.1 | IS3 family transposase ISXac2 | Transposase |
| XcvCFBP7111P_RS24900 () | 70582..71562 | - | 981 | WP_089111250.1 | IS5 family transposase IS1646 | Transposase |
| XcvCFBP7111P_RS26475 () | 71945..72370 | - | 426 | WP_129560231.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24910 () | 72478..73572 | - | 1095 | WP_017116034.1 | BsuBI-PstI family restriction endonuclease | - |
| XcvCFBP7111P_RS24915 () | 73569..75380 | - | 1812 | WP_089113704.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| XcvCFBP7111P_RS24920 () | 75356..75550 | - | 195 | WP_084217975.1 | ribbon-helix-helix domain-containing protein | - |
| XcvCFBP7111P_RS24930 () | 75964..76857 | - | 894 | WP_089113705.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcvCFBP7111P_RS24935 () | 76929..77441 | - | 513 | WP_157768233.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24945 () | 77878..78438 | + | 561 | WP_089113764.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24950 () | 78457..80484 | - | 2028 | WP_089113707.1 | DEAD/DEAH box helicase | - |
| XcvCFBP7111P_RS24955 () | 80487..81113 | - | 627 | WP_089113708.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24960 () | 81110..82120 | - | 1011 | WP_089113709.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24965 () | 82117..82710 | - | 594 | WP_089113710.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24970 () | 82734..84230 | - | 1497 | WP_089113711.1 | DNA cytosine methyltransferase | - |
| XcvCFBP7111P_RS24975 () | 84224..84625 | - | 402 | WP_208617469.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24980 () | 84622..85416 | - | 795 | WP_089113765.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24985 () | 85424..85765 | - | 342 | WP_089113712.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24990 () | 86211..86741 | - | 531 | WP_157768235.1 | hypothetical protein | - |
| XcvCFBP7111P_RS24995 () | 87018..87758 | - | 741 | WP_089113714.1 | EAL domain-containing protein | - |
| XcvCFBP7111P_RS25000 () | 87984..90161 | - | 2178 | WP_089113766.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| XcvCFBP7111P_RS25005 () | 90268..90660 | + | 393 | WP_089113715.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25010 () | 90679..91017 | - | 339 | WP_089113716.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25015 () | 91026..96287 | - | 5262 | WP_089113717.1 | strawberry notch C-terminal domain-containing protein | - |
| XcvCFBP7111P_RS25020 () | 96356..97609 | - | 1254 | WP_089113718.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25025 () | 97779..98165 | - | 387 | WP_089113719.1 | H-NS histone family protein | - |
| XcvCFBP7111P_RS26840 () | 98690..98998 | - | 309 | WP_208617470.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25035 () | 99022..99825 | - | 804 | WP_089113720.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25040 () | 99885..100544 | - | 660 | WP_089113721.1 | hypothetical protein | - |
| XcvCFBP7111P_RS26480 () | 100866..101108 | + | 243 | WP_157768237.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25050 () | 101102..101491 | - | 390 | WP_089113723.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25055 () | 101484..104531 | - | 3048 | WP_089113767.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25060 () | 104541..104804 | - | 264 | WP_089113724.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25065 () | 104794..106038 | - | 1245 | WP_089113725.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25070 () | 106028..106780 | - | 753 | WP_089113726.1 | HNH endonuclease | - |
| XcvCFBP7111P_RS25075 () | 106789..107190 | - | 402 | WP_089113727.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25080 () | 107224..107754 | - | 531 | WP_089113728.1 | IcmC-like type IV secretion system protein | - |
| XcvCFBP7111P_RS25085 () | 107764..108597 | - | 834 | WP_089113768.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25090 () | 108748..110007 | - | 1260 | WP_089113729.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25095 () | 110004..110939 | - | 936 | WP_089113730.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25100 () | 110936..111493 | - | 558 | WP_157768239.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25105 () | 111733..112248 | - | 516 | WP_089113732.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25110 () | 112590..113816 | - | 1227 | WP_089113769.1 | replication initiation protein | - |
| XcvCFBP7111P_RS25115 () | 114507..115850 | + | 1344 | WP_089113733.1 | AAA family ATPase | - |
| XcvCFBP7111P_RS25120 () | 115847..116839 | + | 993 | WP_089113734.1 | ParB/RepB/Spo0J family partition protein | - |
| XcvCFBP7111P_RS25125 () | 117724..118527 | - | 804 | WP_089113735.1 | chromosome partitioning protein | - |
| XcvCFBP7111P_RS25130 () | 119303..120472 | - | 1170 | WP_157768243.1 | site-specific integrase | - |
| XcvCFBP7111P_RS25135 () | 121064..121558 | + | 495 | WP_089113737.1 | DotD/TraH family lipoprotein | - |
| XcvCFBP7111P_RS25140 () | 121545..122324 | + | 780 | WP_089113738.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25145 () | 122321..123514 | + | 1194 | WP_089113739.1 | Twitching mobility protein | VF |
| XcvCFBP7111P_RS25150 () | 123511..123792 | + | 282 | WP_089113740.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25155 () | 123821..124258 | + | 438 | WP_157768245.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25160 () | 124251..125258 | + | 1008 | WP_089113742.1 | ParM/StbA family protein | - |
| XcvCFBP7111P_RS25165 () | 125499..126350 | + | 852 | WP_089113743.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25170 () | 126347..128080 | + | 1734 | WP_089113744.1 | Outer membrane lipoprotein BfpB | VF |
| XcvCFBP7111P_RS25175 () | 128120..129466 | + | 1347 | WP_089113745.1 | type 4b pilus protein PilO2 | - |
| XcvCFBP7111P_RS25180 () | 129456..129956 | + | 501 | WP_157768246.1 | type IV pilus biogenesis protein PilP | - |
| XcvCFBP7111P_RS25185 () | 129970..131577 | + | 1608 | WP_089113770.1 | Type II secretion system protein E | VF |
| XcvCFBP7111P_RS25190 () | 131579..132676 | + | 1098 | WP_089113747.1 | type II secretion system F family protein | - |
| XcvCFBP7111P_RS25195 () | 132747..133235 | + | 489 | WP_157768248.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25200 () | 133256..134224 | + | 969 | WP_089113749.1 | Twitching mobility protein | VF |
| XcvCFBP7111P_RS25205 () | 134221..135744 | + | 1524 | WP_089113750.1 | hypothetical protein | VF |
| XcvCFBP7111P_RS25210 () | 135757..136197 | + | 441 | WP_089113656.1 | type IV pilus biogenesis protein PilM | - |
| XcvCFBP7111P_RS25215 () | 136430..136789 | + | 360 | WP_089113751.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25220 () | 136867..139161 | - | 2295 | Protein_133 | hypothetical protein | VF |
| XcvCFBP7111P_RS25230 () | 139546..140049 | + | 504 | WP_089113661.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25235 () | 140039..140539 | + | 501 | WP_089113662.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25240 () | 140539..141675 | + | 1137 | WP_089113663.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25245 () | 141675..142505 | + | 831 | WP_089113664.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25250 () | 142502..143116 | + | 615 | WP_089113665.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25255 () | 143113..144117 | + | 1005 | WP_089113666.1 | M23 family metallopeptidase | - |
| XcvCFBP7111P_RS25260 () | 144201..145439 | + | 1239 | WP_089113667.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25265 () | 145436..145666 | + | 231 | WP_089113668.1 | hypothetical protein | - |
| XcvCFBP7111P_RS26485 () | 146809..147225 | + | 417 | WP_157768250.1 | hypothetical protein | - |
| XcvCFBP7111P_RS25285 () | 147287..147517 | + | 231 | WP_089113756.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|