MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 60457 bp
Accession: NZ_CP022243 Location: 1966183..2026639 Organism: Vibrio parahaemolyticus strain PB1937 Replicon: chromosome
Accession: NZ_CP022243 Location: 1966183..2026639 Organism: Vibrio parahaemolyticus strain PB1937 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFH89_RS09625 () | 1961577..1961969 | - | 393 | WP_025796295.1 | hypothetical protein | - |
| CFH89_RS09630 () | 1961966..1962388 | - | 423 | WP_114867613.1 | ATP-binding protein | - |
| CFH89_RS09635 () | 1963140..1963619 | + | 480 | WP_015728478.1 | DUF1456 family protein | - |
| CFH89_RS09640 () | 1964224..1965135 | + | 912 | WP_114867614.1 | hypothetical protein | - |
| CFH89_RS09645 () | 1965125..1965595 | + | 471 | WP_086047304.1 | hypothetical protein | - |
| CFH89_RS09650 () | 1966237..1967157 | - | 921 | WP_010446562.1 | IS5 family transposase ISVa2 | Transposase |
| CFH89_RS09655 () | 1967208..1968538 | - | 1331 | Protein_1756 | relaxase/mobilization nuclease domain-containing protein | - |
| CFH89_RS09660 () | 1968528..1969070 | - | 543 | WP_114867615.1 | chromosome partitioning protein ParA | - |
| CFH89_RS09670 () | 1970380..1972278 | - | 1899 | WP_114867970.1 | hypothetical protein ; Integrase | Integrase |
| CFH89_RS09675 () | 1972383..1972640 | + | 258 | Protein_1759 | carboxypeptidase M32 | - |
| CFH89_RS09680 () | 1972727..1973686 | - | 960 | WP_114867616.1 | Lipid A biosynthesis lauroyltransferase | VF |
| CFH89_RS09690 () | 1974373..1975800 | + | 1428 | WP_025550845.1 | Glutamate/gamma-aminobutyrate antiporter | VF |
| CFH89_RS27745 () | 1975913..1976272 | - | 360 | WP_025499161.1 | hypothetical protein | - |
| CFH89_RS09705 () | 1976650..1977591 | + | 942 | WP_005464332.1 | homoserine O-succinyltransferase | - |
| CFH89_RS09710 () | 1977741..1978466 | + | 726 | WP_114867619.1 | Beta-barrel assembly-enhancing protease | VF |
| CFH89_RS09715 () | 1978797..1979726 | + | 930 | WP_021486610.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| CFH89_RS09720 () | 1979726..1981885 | + | 2160 | WP_114867620.1 | putative signaling protein | VF |
| CFH89_RS09725 () | 1982060..1985213 | + | 3154 | Protein_1767 | response regulator | - |
| CFH89_RS09730 () | 1985231..1985704 | + | 474 | WP_021454613.1 | hypothetical protein | - |
| CFH89_RS09735 () | 1985706..1986794 | + | 1089 | WP_162814182.1 | sulfate ABC transporter permease | - |
| CFH89_RS09740 () | 1986870..1987496 | - | 627 | WP_114867622.1 | Galactoside O-acetyltransferase | VF |
| CFH89_RS09745 () | 1987679..1988011 | - | 333 | WP_005464576.1 | hypothetical protein | - |
| CFH89_RS09750 () | 1988195..1988740 | - | 546 | WP_017448894.1 | class IV adenylate cyclase | - |
| CFH89_RS09755 () | 1988828..1989262 | - | 435 | WP_005477866.1 | DUF962 domain-containing protein | - |
| CFH89_RS09760 () | 1989387..1989740 | - | 354 | WP_021449139.1 | MmcQ/YjbR family DNA-binding protein | - |
| CFH89_RS09765 () | 1989773..1990255 | - | 483 | WP_021486608.1 | MarR family transcriptional regulator | - |
| CFH89_RS09770 () | 1990376..1991263 | + | 888 | WP_005464322.1 | DMT family transporter | - |
| CFH89_RS09775 () | 1991330..1992156 | - | 827 | Protein_1777 | helix-turn-helix transcriptional regulator | - |
| CFH89_RS09780 () | 1992291..1992932 | - | 642 | WP_025554377.1 | alanyl-tRNA editing protein | - |
| CFH89_RS09785 () | 1993064..1995160 | - | 2097 | WP_201452315.1 | hypothetical protein | VF |
| CFH89_RS09795 () | 1995787..1997295 | - | 1509 | WP_114867624.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| CFH89_RS09805 () | 1997648..1998664 | - | 1017 | WP_005477846.1 | manganese-dependent inorganic pyrophosphatase | - |
| CFH89_RS09810 () | 1998928..2000199 | - | 1272 | WP_015296864.1 | 4-aminobutyrate aminotransferase PuuE | VF |
| CFH89_RS09815 () | 2000214..2001641 | - | 1428 | WP_162814183.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| CFH89_RS09820 () | 2001696..2002778 | - | 1083 | WP_025522934.1 | agmatine deiminase | - |
| CFH89_RS09825 () | 2002791..2003657 | - | 867 | WP_025522936.1 | N-carbamoylputrescine amidase | - |
| CFH89_RS09830 () | 2003675..2004952 | - | 1278 | WP_031852232.1 | FAD-binding oxidoreductase | - |
| CFH89_RS09835 () | 2004990..2006474 | - | 1485 | WP_025558553.1 | aldehyde dehydrogenase | - |
| CFH89_RS09840 () | 2006510..2007067 | - | 558 | WP_015296870.1 | ISNCY family transposase ISH7A | Transposase |
| CFH89_RS09845 () | 2007086..2007832 | - | 747 | WP_114867627.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| CFH89_RS09855 () | 2008173..2009516 | + | 1344 | WP_005500353.1 | glutamine synthetase family protein | - |
| CFH89_RS09860 () | 2009535..2011010 | + | 1476 | WP_021449153.1 | na+/H+ antiporter family protein | - |
| CFH89_RS09865 () | 2011101..2011562 | - | 462 | WP_025499321.1 | hypothetical protein | - |
| CFH89_RS09870 () | 2011904..2012350 | + | 447 | WP_021449154.1 | DUF3291 domain-containing protein | - |
| CFH89_RS09875 () | 2012466..2012738 | + | 273 | WP_025518832.1 | lactoylglutathione lyase | - |
| CFH89_RS09880 () | 2012880..2013893 | - | 1014 | Protein_1795 | IS481 family transposase | - |
| CFH89_RS09885 () | 2014207..2014653 | - | 447 | Protein_1796 | GNAT family N-acetyltransferase | - |
| CFH89_RS09890 () | 2014832..2015242 | - | 411 | WP_024701711.1 | hypothetical protein | - |
| CFH89_RS09895 () | 2015323..2016213 | - | 891 | WP_005485669.1 | hypothetical protein | - |
| CFH89_RS09900 () | 2016400..2016455 | - | 56 | Protein_1799 | DUF3265 domain-containing protein | - |
| CFH89_RS09915 () | 2016723..2017523 | - | 801 | WP_159408403.1 | IS3 family transposase ISDpr3 | Transposase |
| CFH89_RS09920 () | 2017607..2017828 | - | 222 | Protein_1801 | IS3 family transposase ISNisp1 | Transposase |
| CFH89_RS09925 () | 2018045..2018314 | - | 270 | WP_005464459.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| CFH89_RS09930 () | 2018307..2018561 | - | 255 | WP_005483180.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| CFH89_RS09935 () | 2018664..2018783 | - | 120 | WP_078581129.1 | DUF3265 domain-containing protein | - |
| CFH89_RS09940 () | 2018770..2019144 | - | 375 | WP_025787405.1 | hypothetical protein | - |
| CFH89_RS09950 () | 2019793..2020188 | - | 396 | WP_017449623.1 | ACT domain-containing protein | - |
| CFH89_RS09955 () | 2020342..2020737 | - | 396 | WP_114867630.1 | hypothetical protein | - |
| CFH89_RS09960 () | 2020837..2021757 | + | 921 | WP_010446562.1 | IS5 family transposase ISVa2 | Transposase |
| CFH89_RS09965 () | 2021771..2021995 | - | 225 | WP_114867631.1 | hypothetical protein | - |
| CFH89_RS09970 () | 2022144..2022605 | - | 462 | WP_025787408.1 | RidA family protein | - |
| CFH89_RS09975 () | 2022748..2023698 | - | 951 | WP_031815789.1 | DUF4062 domain-containing protein | - |
| CFH89_RS09980 () | 2023845..2024354 | - | 510 | WP_000100093.1 | hypothetical protein | VF |
| CFH89_RS09985 () | 2024382..2024474 | - | 93 | WP_078581101.1 | DUF3265 domain-containing protein | - |
| CFH89_RS09990 () | 2024500..2025291 | - | 792 | WP_031815790.1 | hypothetical protein | - |
| CFH89_RS09995 () | 2025431..2025784 | - | 354 | WP_025555140.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| CFH89_RS10000 () | 2025922..2026452 | - | 531 | WP_114867632.1 | hypothetical protein | - |
| CFH89_RS10005 () | 2026480..2026572 | - | 93 | WP_114867633.1 | DUF3265 domain-containing protein | - |
| CFH89_RS10010 () | 2026701..2027621 | + | 921 | WP_010446562.1 | IS5 family transposase | - |
| CFH89_RS10015 () | 2027912..2028604 | + | 693 | WP_045588479.1 | hypothetical protein | - |
| CFH89_RS10020 () | 2029345..2029647 | - | 303 | WP_031815793.1 | hypothetical protein | - |
| CFH89_RS10025 () | 2029634..2029795 | - | 162 | WP_078581078.1 | DUF3265 domain-containing protein | - |
| CFH89_RS10030 () | 2029841..2030125 | + | 285 | WP_005398409.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CFH89_RS10035 () | 2030122..2030400 | + | 279 | WP_005398411.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CFH89_RS10045 () | 2030542..2031324 | - | 783 | WP_005462179.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|