MGE detailed information
MGE type: Genomic_island MGE length: 45777 bp
Accession: NZ_CP022229 Location: 2478425..2524201 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Accession: NZ_CP022229 Location: 2478425..2524201 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR04_RS13845 () | 2474830..2475549 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| DBR04_RS13850 () | 2475546..2477177 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| DBR04_RS13855 () | 2477358..2477588 | + | 231 | WP_000373291.1 | (4Fe-4S)-binding protein | - |
| DBR04_RS13860 () | 2477600..2477872 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| DBR04_RS13865 () | 2478101..2478397 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| DBR04_RS13870 () | 2478425..2478598 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| DBR04_RS13875 () | 2478717..2480234 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| DBR04_RS13880 () | 2480471..2481928 | - | 1458 | WP_000856827.1 | dipeptide/tripeptide permease DtpC | - |
| DBR04_RS13885 () | 2481987..2484134 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| DBR04_RS13890 () | 2484214..2485548 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DBR04_RS13900 () | 2485913..2487451 | - | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DBR04_RS13905 () | 2488200..2489042 | - | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| DBR04_RS26860 () | 2489127..2489549 | - | 423 | WP_001564064.1 | DUF957 domain-containing protein | - |
| DBR04_RS13920 () | 2489546..2489923 | - | 378 | WP_029701676.1 | TA system toxin CbtA family protein | Toxin Detail |
| DBR04_RS13925 () | 2490013..2490381 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DBR04_RS13930 () | 2490544..2490765 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| DBR04_RS13935 () | 2490830..2491306 | - | 477 | WP_021553055.1 | RadC family protein | - |
| DBR04_RS13940 () | 2491322..2491801 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| DBR04_RS13945 () | 2492067..2492885 | - | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| DBR04_RS13950 () | 2492975..2493208 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| DBR04_RS13955 () | 2493214..2493891 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| DBR04_RS13960 () | 2494039..2494719 | - | 681 | WP_029702103.1 | WYL domain-containing protein | - |
| DBR04_RS13965 () | 2494922..2495806 | - | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| DBR04_RS13975 () | 2495907..2497129 | + | 1223 | Protein_2296 | hypothetical protein | - |
| DBR04_RS13980 () | 2498292..2498822 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| DBR04_RS13990 () | 2499492..2500223 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| DBR04_RS14000 () | 2500744..2501196 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| DBR04_RS14005 () | 2501732..2502667 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| DBR04_RS14010 () | 2502660..2503595 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| DBR04_RS14015 () | 2503679..2504929 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| DBR04_RS14020 () | 2504948..2506042 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| DBR04_RS26865 () | 2506433..2506576 | - | 144 | WP_157908324.1 | hypothetical protein | - |
| DBR04_RS14030 () | 2507406..2507972 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| DBR04_RS14035 () | 2508230..2508805 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| DBR04_RS14040 () | 2508874..2509107 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| DBR04_RS14045 () | 2509119..2509344 | + | 226 | Protein_2308 | hypothetical protein | - |
| DBR04_RS14050 () | 2509406..2509672 | - | 267 | Protein_2309 | IS3 family transposase IS2 | Transposase |
| DBR04_RS14055 () | 2509763..2510920 | + | 1158 | Protein_2310 | Multidrug resistance protein MexB | VF |
| DBR04_RS14060 () | 2511041..2511691 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| DBR04_RS14065 () | 2511714..2512007 | + | 294 | Protein_2312 | helix-turn-helix domain-containing protein | - |
| DBR04_RS14070 () | 2512364..2512909 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| DBR04_RS14075 () | 2512954..2514105 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| DBR04_RS14080 () | 2514234..2515289 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| DBR04_RS14085 () | 2515306..2516535 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| DBR04_RS14095 () | 2517118..2517639 | - | 522 | WP_000237741.1 | maturase | - |
| DBR04_RS14100 () | 2517667..2518206 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| DBR04_RS14110 () | 2518692..2519597 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| DBR04_RS14115 () | 2519734..2520651 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| DBR04_RS14120 () | 2520760..2523312 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| DBR04_RS14125 () | 2523361..2523936 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| DBR04_RS14130 () | 2523947..2524246 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| DBR04_RS14135 () | 2524270..2525787 | - | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| DBR04_RS14140 () | 2525848..2526633 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| DBR04_RS14145 () | 2526655..2526936 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| DBR04_RS14150 () | 2527221..2528417 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| DBR04_RS14155 () | 2528446..2528943 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|