MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82715 bp
Accession: NZ_CP022141 Location: 1..82715 Organism: Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K Replicon: plasmid unnamed2
Accession: NZ_CP022141 Location: 1..82715 Organism: Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ47_RS24815 () | 1..1383 | + | 1383 | WP_015062265.1 | type 4b pilus protein PilO2 | - |
| LFZ47_RS24820 () | 1358..1789 | + | 432 | WP_015062177.1 | type IV pilus biogenesis protein PilP | - |
| LFZ47_RS24825 () | 1799..3343 | + | 1545 | WP_080224738.1 | Type II secretion system protein E | VF |
| LFZ47_RS24830 () | 3336..4400 | + | 1065 | WP_080224739.1 | conjugal transfer protein | - |
| LFZ47_RS24835 () | 4411..4920 | + | 510 | WP_080224740.1 | hypothetical protein | VF |
| LFZ47_RS24840 () | 4969..5922 | + | 954 | WP_001719579.1 | putative protein YggR | VF |
| LFZ47_RS24845 () | 5919..7226 | + | 1308 | WP_080224741.1 | hypothetical protein | VF |
| LFZ47_RS24850 () | 7312..7731 | + | 420 | WP_080224742.1 | type IV pilus biogenesis protein PilM | - |
| LFZ47_RS24855 () | 7734..8348 | + | 615 | WP_060615721.1 | prepilin peptidase | - |
| LFZ47_RS24860 () | 8324..8806 | + | 483 | WP_080224743.1 | hypothetical protein | VF |
| LFZ47_RS24865 () | 8808..9194 | + | 387 | WP_080224744.1 | exodeoxyribonuclease V subunit beta | - |
| LFZ47_RS24870 () | 9290..9592 | + | 303 | WP_080224745.1 | hypothetical protein | - |
| LFZ47_RS24875 () | 10013..17179 | - | 7167 | WP_080224746.1 | hypothetical protein | VF |
| LFZ47_RS24880 () | 17242..18645 | - | 1404 | WP_088744883.1 | ParB/RepB/Spo0J family partition protein | - |
| LFZ47_RS24885 () | 18638..19702 | - | 1065 | WP_015062161.1 | ParA family protein | - |
| LFZ47_RS24890 () | 20160..20549 | - | 390 | WP_015062159.1 | hypothetical protein | - |
| LFZ47_RS24895 () | 20549..22555 | - | 2007 | WP_080224700.1 | DNA topoisomerase 3 | - |
| LFZ47_RS24900 () | 22633..23769 | + | 1137 | WP_080224701.1 | hypothetical protein | - |
| LFZ47_RS24905 () | 23793..24812 | + | 1020 | WP_080224702.1 | thioredoxin fold domain-containing protein | - |
| LFZ47_RS24910 () | 24812..26074 | + | 1263 | WP_015062153.1 | DNA primase | - |
| LFZ47_RS24915 () | 26067..28199 | + | 2133 | WP_080224703.1 | hypothetical protein | VF |
| LFZ47_RS24920 () | 28221..29582 | + | 1362 | WP_023177082.1 | DUF87 domain-containing protein | - |
| LFZ47_RS24925 () | 29633..30214 | - | 582 | WP_015062252.1 | hypothetical protein | - |
| LFZ47_RS24930 () | 30473..30967 | - | 495 | WP_139761799.1 | hypothetical protein | - |
| LFZ47_RS25595 () | 31091..31507 | + | 417 | WP_015062319.1 | hypothetical protein | - |
| LFZ47_RS24940 () | 31557..32237 | - | 681 | WP_080224705.1 | DotD/TraH family lipoprotein | - |
| LFZ47_RS24950 () | 32713..33879 | - | 1167 | WP_015062244.1 | Twitching mobility protein | VF |
| LFZ47_RS24955 () | 33879..34718 | - | 840 | WP_015062243.1 | hypothetical protein | VF |
| LFZ47_RS24960 () | 35134..35391 | + | 258 | WP_134950290.1 | hypothetical protein | - |
| LFZ47_RS24965 () | 35430..37361 | + | 1932 | WP_080224707.1 | ParB/RepB/Spo0J family partition protein | - |
| LFZ47_RS25600 () | 37552..38028 | + | 477 | WP_141030773.1 | hypothetical protein | - |
| LFZ47_RS24975 () | 38249..38536 | + | 288 | WP_080224709.1 | hypothetical protein | - |
| LFZ47_RS24980 () | 38572..38874 | + | 303 | WP_080224710.1 | type II toxin-antitoxin system HigB family toxin | - |
| LFZ47_RS24985 () | 38880..39239 | + | 360 | WP_080224711.1 | helix-turn-helix domain-containing protein | - |
| LFZ47_RS24990 () | 39268..39648 | + | 381 | WP_080224712.1 | hypothetical protein | - |
| LFZ47_RS25605 () | 39750..40022 | - | 273 | WP_157698318.1 | hypothetical protein | - |
| LFZ47_RS25000 () | 40126..40377 | + | 252 | WP_015062690.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LFZ47_RS25005 () | 40374..40661 | + | 288 | WP_015062691.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LFZ47_RS25610 () | 40667..41032 | + | 366 | WP_139134637.1 | hypothetical protein | - |
| LFZ47_RS25015 () | 41029..41310 | + | 282 | WP_080224713.1 | hypothetical protein | - |
| LFZ47_RS25020 () | 41495..42886 | + | 1392 | WP_015062301.1 | cysteine--tRNA ligase | - |
| LFZ47_RS25615 () | 43411..43806 | - | 396 | WP_015062300.1 | hypothetical protein | - |
| LFZ47_RS25620 () | 44041..44229 | - | 189 | WP_015062299.1 | hypothetical protein | - |
| LFZ47_RS25025 () | 44302..47016 | - | 2715 | WP_015062298.1 | DotA/TraY family protein | - |
| LFZ47_RS25030 () | 47019..48233 | - | 1215 | WP_080224714.1 | conjugal transfer protein TraW | - |
| LFZ47_RS25035 () | 48220..51282 | - | 3063 | WP_015062297.1 | hypothetical protein | VF |
| LFZ47_RS25040 () | 51284..51718 | - | 435 | WP_069721912.1 | hypothetical protein | - |
| LFZ47_RS25045 () | 51770..52126 | - | 357 | WP_080224715.1 | hypothetical protein | - |
| LFZ47_RS25050 () | 52136..52651 | - | 516 | WP_015062218.1 | conjugal transfer protein TraQ | - |
| LFZ47_RS25055 () | 52651..53373 | - | 723 | WP_080224716.1 | hypothetical protein | - |
| LFZ47_RS25060 () | 53417..54709 | - | 1293 | WP_080224717.1 | DotG/IcmE/VirB10 family protein | - |
| LFZ47_RS25065 () | 54710..55849 | - | 1140 | WP_080224718.1 | hypothetical protein | VF |
| LFZ47_RS25070 () | 55863..56543 | - | 681 | WP_080224719.1 | DotI/IcmL family type IV secretion protein | - |
| LFZ47_RS25075 () | 56883..57251 | - | 369 | WP_141030774.1 | hypothetical protein | - |
| LFZ47_RS25080 () | 57367..57612 | + | 246 | WP_080224721.1 | hypothetical protein | - |
| LFZ47_RS25085 () | 57900..59114 | + | 1215 | WP_080224722.1 | replication initiation protein | - |
| LFZ47_RS25090 () | 59201..59830 | + | 630 | WP_080224723.1 | hypothetical protein | - |
| LFZ47_RS25095 () | 60360..60551 | + | 192 | WP_015062208.1 | hypothetical protein | - |
| LFZ47_RS25100 () | 60553..60804 | + | 252 | WP_015062207.1 | helix-turn-helix transcriptional regulator | - |
| LFZ47_RS25105 () | 60872..61162 | - | 291 | WP_080224724.1 | helix-turn-helix domain-containing protein | - |
| LFZ47_RS25110 () | 61162..61491 | - | 330 | WP_015062286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LFZ47_RS25115 () | 61942..62673 | - | 732 | WP_065304912.1 | tyrosine-type recombinase/integrase | - |
| LFZ47_RS25125 () | 63165..63437 | - | 273 | WP_015062202.1 | hypothetical protein | - |
| LFZ47_RS25130 () | 63460..63672 | - | 213 | WP_015062201.1 | hypothetical protein | - |
| LFZ47_RS25135 () | 64026..65675 | + | 1650 | WP_080224726.1 | hypothetical protein | - |
| LFZ47_RS25140 () | 66086..66535 | + | 450 | WP_080224727.1 | hypothetical protein | - |
| LFZ47_RS25145 () | 66591..67676 | + | 1086 | WP_080224728.1 | DGQHR domain-containing protein | - |
| LFZ47_RS25150 () | 67722..69602 | + | 1881 | WP_080224729.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LFZ47_RS25155 () | 69681..69935 | + | 255 | WP_015062195.1 | hypothetical protein | - |
| LFZ47_RS25160 () | 69984..70247 | - | 264 | WP_015062194.1 | hypothetical protein | - |
| LFZ47_RS25165 () | 70419..71573 | - | 1155 | WP_080224730.1 | hypothetical protein | - |
| LFZ47_RS25170 () | 71690..72208 | - | 519 | WP_141030775.1 | hypothetical protein | - |
| LFZ47_RS25175 () | 72258..72641 | - | 384 | WP_015062191.1 | hypothetical protein | - |
| LFZ47_RS25180 () | 72654..73010 | - | 357 | WP_080224732.1 | hypothetical protein | - |
| LFZ47_RS25185 () | 73083..74072 | - | 990 | WP_080224733.1 | hypothetical protein | - |
| LFZ47_RS25190 () | 74090..74575 | - | 486 | WP_080224734.1 | hypothetical protein | VF |
| LFZ47_RS25195 () | 74584..75243 | - | 660 | WP_080224735.1 | hypothetical protein | - |
| LFZ47_RS25200 () | 75248..76015 | - | 768 | WP_080224736.1 | hypothetical protein | - |
| LFZ47_RS25625 () | 76017..76415 | - | 399 | WP_141030776.1 | hypothetical protein | - |
| LFZ47_RS25205 () | 76675..77217 | + | 543 | WP_157698319.1 | hypothetical protein | Relaxase |
| LFZ47_RS25210 () | 77214..79775 | + | 2562 | WP_080224737.1 | hypothetical protein | - |
| LFZ47_RS25215 () | 80230..81030 | + | 801 | WP_080224747.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|