MGE detailed information
MGE type: Genomic_island MGE length: 72792 bp
Accession: NZ_CP022110 Location: 1009343..1082134 Organism: Nitrospirillum amazonense CBAmc Replicon: chromosome
Accession: NZ_CP022110 Location: 1009343..1082134 Organism: Nitrospirillum amazonense CBAmc Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y958_RS04635 () | 1005815..1007068 | + | 1254 | WP_088872475.1 | tyrosine-type recombinase/integrase | - |
| Y958_RS04640 () | 1007088..1007729 | + | 642 | WP_088871080.1 | GNAT family N-acetyltransferase | - |
| Y958_RS04645 () | 1007798..1008187 | + | 390 | WP_088872476.1 | GNAT family N-acetyltransferase | - |
| Y958_RS04650 () | 1008835..1009269 | + | 435 | WP_088871081.1 | hypothetical protein | - |
| Y958_RS04655 () | 1009343..1009726 | - | 384 | WP_088872477.1 | AlpA family phage regulatory protein | - |
| Y958_RS31205 () | 1009752..1010006 | + | 255 | WP_145727941.1 | hypothetical protein | - |
| Y958_RS04660 () | 1010087..1010440 | + | 354 | WP_088872478.1 | DUF2958 domain-containing protein | - |
| Y958_RS31210 () | 1010503..1010634 | - | 132 | Protein_915 | IS5/IS1182 family transposase | - |
| Y958_RS04665 () | 1010742..1011434 | + | 693 | WP_088871082.1 | alpha/beta fold hydrolase | - |
| Y958_RS04670 () | 1011739..1013754 | + | 2016 | WP_088871083.1 | ParB/RepB/Spo0J family partition protein | - |
| Y958_RS04675 () | 1014011..1014640 | + | 630 | WP_088871084.1 | hypothetical protein | - |
| Y958_RS04680 () | 1014633..1015319 | + | 687 | WP_088871085.1 | class I SAM-dependent methyltransferase | - |
| Y958_RS04685 () | 1015384..1015914 | - | 531 | WP_088872479.1 | AAA family ATPase | - |
| Y958_RS04690 () | 1016002..1016553 | - | 552 | WP_088871086.1 | DUF2867 domain-containing protein | - |
| Y958_RS04700 () | 1017125..1017439 | + | 315 | WP_088871088.1 | DUF736 domain-containing protein | - |
| Y958_RS04705 () | 1017466..1018116 | - | 651 | WP_088871089.1 | NAD(P)H-dependent oxidoreductase | - |
| Y958_RS04710 () | 1018199..1018819 | + | 621 | WP_088872480.1 | TetR/AcrR family transcriptional regulator | - |
| Y958_RS04715 () | 1019141..1019983 | + | 843 | WP_088871090.1 | DUF945 domain-containing protein | - |
| Y958_RS04725 () | 1020515..1021066 | + | 552 | WP_088871092.1 | DUF2285 domain-containing protein | - |
| Y958_RS04730 () | 1021230..1021499 | + | 270 | WP_088871093.1 | helix-turn-helix domain-containing protein | - |
| Y958_RS04735 () | 1021500..1022570 | + | 1071 | WP_088871094.1 | replication initiator protein A | - |
| Y958_RS04740 () | 1022567..1023220 | + | 654 | WP_088871095.1 | AAA family ATPase | - |
| Y958_RS04745 () | 1023217..1023468 | + | 252 | WP_088871096.1 | hypothetical protein | - |
| Y958_RS04750 () | 1023465..1023986 | + | 522 | WP_088871097.1 | DUF2840 domain-containing protein | - |
| Y958_RS04755 () | 1023983..1024528 | + | 546 | WP_088871098.1 | S26 family signal peptidase | - |
| Y958_RS04760 () | 1024574..1024906 | + | 333 | WP_088871099.1 | DUF736 domain-containing protein | - |
| Y958_RS04765 () | 1024911..1025840 | + | 930 | WP_088872481.1 | lytic transglycosylase domain-containing protein | - |
| Y958_RS04770 () | 1026130..1028184 | + | 2055 | WP_088871100.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| Y958_RS04775 () | 1028215..1029138 | - | 924 | WP_088871101.1 | LysR family transcriptional regulator | - |
| Y958_RS04780 () | 1029261..1030481 | + | 1221 | WP_088871102.1 | MFS transporter | - |
| Y958_RS04785 () | 1030481..1031404 | + | 924 | WP_088871103.1 | EthD domain-containing protein | - |
| Y958_RS04790 () | 1031464..1032324 | - | 861 | WP_186291262.1 | LysR family transcriptional regulator | - |
| Y958_RS04795 () | 1032514..1034031 | + | 1518 | WP_088871105.1 | MFS transporter | - |
| Y958_RS04800 () | 1034161..1035123 | + | 963 | WP_088871106.1 | LysR family transcriptional regulator | - |
| Y958_RS31215 () | 1035368..1036099 | + | 732 | WP_145727940.1 | hypothetical protein | - |
| Y958_RS04810 () | 1036257..1036478 | - | 222 | WP_088871108.1 | helix-turn-helix transcriptional regulator | - |
| Y958_RS04815 () | 1036688..1036984 | + | 297 | WP_088871109.1 | DUF2285 domain-containing protein | - |
| Y958_RS04820 () | 1036996..1037961 | - | 966 | WP_186291263.1 | AraC family transcriptional regulator | - |
| Y958_RS04825 () | 1038066..1039073 | + | 1008 | WP_088871111.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| Y958_RS04830 () | 1039220..1040761 | + | 1542 | Protein_947 | conjugal transfer protein TraG | - |
| Y958_RS04835 () | 1040837..1041271 | + | 435 | WP_088870543.1 | IS66 family insertion sequence hypothetical protein | - |
| Y958_RS04840 () | 1041268..1041615 | + | 348 | WP_088870542.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| Y958_RS04845 () | 1041712..1043307 | + | 1596 | WP_145960797.1 | IS66 family transposase | - |
| Y958_RS04850 () | 1043304..1043909 | + | 606 | WP_088870540.1 | plasmid pRiA4b ORF-3 family protein | - |
| Y958_RS04855 () | 1043959..1044396 | + | 438 | WP_145960790.1 | type IV secretory system conjugative DNA transfer family protein | - |
| Y958_RS04860 () | 1044405..1044842 | + | 438 | WP_088872482.1 | ribbon-helix-helix domain-containing protein | - |
| Y958_RS04865 () | 1044903..1045799 | - | 897 | WP_088871112.1 | phosphotransferase | - |
| Y958_RS04870 () | 1045915..1047102 | - | 1188 | WP_088871113.1 | MFS transporter | - |
| Y958_RS04875 () | 1047026..1047484 | - | 459 | WP_088871114.1 | MerR family transcriptional regulator | - |
| Y958_RS04880 () | 1047734..1048741 | + | 1008 | WP_088871115.1 | P-type conjugative transfer ATPase TrbB | - |
| Y958_RS04885 () | 1048738..1049070 | + | 333 | WP_073625733.1 | TrbC/VirB2 family protein | - |
| Y958_RS04890 () | 1049070..1049351 | + | 282 | WP_088871116.1 | VirB3 family type IV secretion system protein | - |
| Y958_RS04895 () | 1049364..1051802 | + | 2439 | WP_088871117.1 | conjugal transfer protein TrbE | - |
| Y958_RS04900 () | 1051799..1052557 | + | 759 | WP_088871118.1 | P-type conjugative transfer protein TrbJ | - |
| Y958_RS04905 () | 1052568..1052837 | + | 270 | WP_088871119.1 | putative entry exclusion protein TrbK-alt | - |
| Y958_RS04910 () | 1052840..1054165 | + | 1326 | WP_088871120.1 | P-type conjugative transfer protein TrbL | - |
| Y958_RS04915 () | 1054165..1054848 | + | 684 | WP_088871121.1 | conjugal transfer protein TrbF | - |
| Y958_RS04920 () | 1054845..1055912 | + | 1068 | WP_088871122.1 | P-type conjugative transfer protein TrbG | - |
| Y958_RS04925 () | 1055990..1057132 | + | 1143 | WP_211098569.1 | TrbI/VirB10 family protein | - |
| Y958_RS04930 () | 1057134..1057373 | + | 240 | WP_088871124.1 | DUF2274 domain-containing protein | - |
| Y958_RS04935 () | 1058106..1060361 | + | 2256 | WP_211098530.1 | hypothetical protein | - |
| Y958_RS04940 () | 1060354..1064571 | + | 4218 | WP_088871126.1 | helicase | - |
| Y958_RS04945 () | 1064574..1066814 | + | 2241 | WP_186291264.1 | hypothetical protein | - |
| Y958_RS04950 () | 1066811..1067662 | + | 852 | WP_088871127.1 | hypothetical protein | - |
| Y958_RS31220 () | 1067681..1069363 | + | 1683 | WP_211098531.1 | N-6 DNA methylase | - |
| Y958_RS31225 () | 1069360..1069986 | + | 627 | WP_145727996.1 | hypothetical protein | - |
| Y958_RS04955 () | 1070093..1071028 | + | 936 | WP_186291265.1 | DUF4365 domain-containing protein | - |
| Y958_RS04960 () | 1071190..1071750 | + | 561 | WP_211098532.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| Y958_RS04965 () | 1071740..1072651 | + | 912 | WP_088871130.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| Y958_RS04970 () | 1073091..1074686 | - | 1596 | WP_088872484.1 | IS66 family transposase | - |
| Y958_RS04975 () | 1074794..1075141 | - | 348 | WP_088871131.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| Y958_RS04980 () | 1075138..1075551 | - | 414 | WP_186291266.1 | transposase | - |
| Y958_RS04985 () | 1075857..1076498 | - | 642 | WP_088872485.1 | DsbA family protein | - |
| Y958_RS04990 () | 1076583..1077509 | - | 927 | WP_088871133.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| Y958_RS04995 () | 1077574..1078218 | - | 645 | WP_088871134.1 | SDR family oxidoreductase | - |
| Y958_RS05000 () | 1078304..1078924 | - | 621 | WP_088871135.1 | NAD(P)H-dependent oxidoreductase | - |
| Y958_RS05005 () | 1079011..1079388 | + | 378 | WP_088871136.1 | helix-turn-helix transcriptional regulator | - |
| Y958_RS05010 () | 1080012..1080800 | - | 789 | WP_088871137.1 | SDR family oxidoreductase | - |
| Y958_RS05015 () | 1080797..1081156 | - | 360 | WP_211098533.1 | nuclear transport factor 2 family protein | - |
| Y958_RS05020 () | 1081223..1082134 | + | 912 | WP_088871138.1 | LysR family transcriptional regulator | - |
| Y958_RS05025 () | 1082534..1083592 | - | 1059 | WP_040843665.1 | L-rhamnose/proton symporter RhaT | - |
| Y958_RS05030 () | 1083624..1084568 | - | 945 | WP_088871139.1 | amidohydrolase family protein | - |
| Y958_RS05035 () | 1084615..1085394 | - | 780 | WP_088871140.1 | SDR family oxidoreductase | - |
| Y958_RS05040 () | 1085367..1086233 | - | 867 | WP_088871141.1 | fumarylacetoacetate hydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|