MGE detailed information
MGE type: IScluster/Tn MGE length: 4109 bp
Accession: NZ_CP022089 Location: 142887..146995 Organism: Shewanella sp. FDAARGOS_354 Replicon: chromosome
Accession: NZ_CP022089 Location: 142887..146995 Organism: Shewanella sp. FDAARGOS_354 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ32_RS00715 () | 138465..138710 | + | 246 | WP_014610893.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| CEQ32_RS00720 () | 138729..139823 | - | 1095 | WP_088585325.1 | transposase | - |
| CEQ32_RS00725 () | 139870..140274 | + | 405 | WP_069453179.1 | IS200/IS605 family transposase | - |
| CEQ32_RS00730 () | 140381..140653 | + | 273 | WP_069453183.1 | CcdB family protein | - |
| CEQ32_RS00735 () | 141008..142375 | + | 1368 | WP_014610930.1 | HipA domain-containing protein | - |
| CEQ32_RS00740 () | 142372..142752 | + | 381 | WP_086904820.1 | helix-turn-helix domain-containing protein | - |
| CEQ32_RS00745 () | 142887..144095 | + | 1209 | WP_001206290.1 | IS4 family transposase IS10A | Transposase |
| CEQ32_RS00750 () | 144253..144594 | - | 342 | WP_014610929.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CEQ32_RS00755 () | 144591..144845 | - | 255 | WP_088585326.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CEQ32_RS00760 () | 145078..145977 | + | 900 | WP_088585327.1 | IS982 family transposase ISSde7 | Transposase |
| CEQ32_RS00765 () | 146074..147223 | + | 1150 | Protein_147 | IS3 family transposase | - |
| CEQ32_RS00770 () | 147254..147805 | + | 552 | Protein_148 | GDP-mannose 4,6-dehydratase | - |
| CEQ32_RS00775 () | 147904..148053 | + | 150 | WP_088586927.1 | tyrosine-type recombinase/integrase | - |
| CEQ32_RS22900 () | 148131..148295 | - | 165 | WP_014610884.1 | hypothetical protein | - |
| CEQ32_RS00780 () | 148317..149042 | - | 726 | WP_088585328.1 | zeta toxin family protein | - |
| CEQ32_RS00785 () | 149116..150282 | - | 1167 | WP_088585329.1 | DUF3596 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|