MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93862 bp
Accession: NZ_CP022071 Location: 1..93862 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 Replicon: plasmid unnamed1
Accession: NZ_CP022071 Location: 1..93862 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP99_RS25155 () | 1043..1462 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| CEP99_RS25160 () | 1499..2137 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CEP99_RS25165 () | 2122..2430 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| CEP99_RS25170 () | 2449..3441 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| CEP99_RS25175 () | 3438..4070 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| CEP99_RS25180 () | 4067..4453 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| CEP99_RS25185 () | 4428..7076 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| CEP99_RS25190 () | 7092..7355 | - | 264 | WP_001239255.1 | hypothetical protein | - |
| CEP99_RS25195 () | 7472..7939 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| CEP99_RS25200 () | 7932..8153 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| CEP99_RS25205 () | 8288..8803 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CEP99_RS25210 () | 8800..9045 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| CEP99_RS25215 () | 9023..9619 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| CEP99_RS25220 () | 9609..11030 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| CEP99_RS25225 () | 11030..11770 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| CEP99_RS25230 () | 11757..12323 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| CEP99_RS25235 () | 12345..12656 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| CEP99_RS25240 () | 12671..13033 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| CEP99_RS25245 () | 13075..13302 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| CEP99_RS25250 () | 13396..14082 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| CEP99_RS25255 () | 14275..14655 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| CEP99_RS25265 () | 15070..15540 | + | 471 | WP_014344446.1 | transglycosylase SLT domain-containing protein | - |
| CEP99_RS26305 () | 15851..16669 | - | 819 | Protein_23 | DUF945 domain-containing protein | - |
| CEP99_RS26310 () | 16772..16930 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| CEP99_RS25275 () | 17179..17916 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| CEP99_RS25280 () | 17913..18347 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| CEP99_RS25285 () | 18387..20384 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| CEP99_RS25290 () | 20453..20695 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| CEP99_RS25295 () | 20750..21268 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| CEP99_RS26315 () | 21862..22035 | - | 174 | WP_155522194.1 | hypothetical protein | - |
| CEP99_RS25315 () | 21999..22322 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| CEP99_RS25320 () | 22558..22992 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| CEP99_RS25325 () | 23059..23493 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| CEP99_RS25335 () | 23989..24753 | - | 765 | WP_001246548.1 | membrane protein | - |
| CEP99_RS25340 () | 24825..25238 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| CEP99_RS25345 () | 25294..25515 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| CEP99_RS25350 () | 25515..26195 | - | 681 | WP_000088645.1 | DNA methylase | - |
| CEP99_RS25360 () | 26577..26933 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| CEP99_RS25365 () | 26926..27396 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| CEP99_RS25370 () | 27907..28329 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CEP99_RS25375 () | 28329..29603 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| CEP99_RS25380 () | 29685..30659 | - | 975 | WP_000064272.1 | ParB/RepB/Spo0J family partition protein | - |
| CEP99_RS25385 () | 30659..31864 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| CEP99_RS25390 () | 32279..33220 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CEP99_RS25395 () | 33252..33818 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| CEP99_RS25400 () | 33875..34210 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| CEP99_RS25405 () | 34394..34810 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| CEP99_RS25410 () | 34896..36011 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| CEP99_RS25415 () | 36270..36758 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| CEP99_RS25425 () | 37413..38153 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| CEP99_RS25430 () | 38360..38920 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| CEP99_RS25435 () | 38904..40568 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| CEP99_RS25440 () | 40501..41526 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| CEP99_RS25445 () | 41715..42752 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| CEP99_RS25450 () | 43362..44255 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| CEP99_RS25455 () | 44429..44593 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| CEP99_RS25460 () | 44767..45534 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| CEP99_RS26320 () | 45497..45664 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| CEP99_RS25465 () | 45716..47491 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| CEP99_RS25470 () | 47772..48497 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| CEP99_RS25475 () | 48758..49408 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| CEP99_RS25480 () | 49535..49959 | - | 425 | Protein_62 | IS200/IS605 family transposase | - |
| CEP99_RS25485 () | 50016..50366 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| CEP99_RS25490 () | 50433..50993 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| CEP99_RS26325 () | 51149..51436 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| CEP99_RS25495 () | 51713..52198 | - | 486 | WP_000905606.1 | membrane protein | - |
| CEP99_RS25500 () | 52192..52701 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| CEP99_RS25510 () | 52705..53418 | - | 714 | Protein_68 | EAL domain-containing protein | - |
| CEP99_RS25515 () | 53427..54209 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| CEP99_RS25520 () | 54244..54765 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| CEP99_RS25525 () | 54762..55052 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| CEP99_RS25530 () | 55054..55359 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CEP99_RS25535 () | 55361..55579 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CEP99_RS25540 () | 56255..56776 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| CEP99_RS25550 () | 57260..57556 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| CEP99_RS25555 () | 58050..59039 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| CEP99_RS25560 () | 59298..59742 | - | 445 | Protein_77 | site-specific integrase | - |
| CEP99_RS25565 () | 59911..60292 | - | 382 | Protein_78 | YgiW/YdeI family stress tolerance OB fold protein | - |
| CEP99_RS25575 () | 61011..61313 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| CEP99_RS25580 () | 61588..62106 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| CEP99_RS25585 () | 62333..64741 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| CEP99_RS25590 () | 64734..65426 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| CEP99_RS25595 () | 65441..65998 | + | 558 | WP_010999940.1 | membrane protein | - |
| CEP99_RS25600 () | 66251..67126 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| CEP99_RS25605 () | 67558..67770 | + | 213 | WP_058678170.1 | transcriptional regulator PefI | - |
| CEP99_RS25610 () | 67755..68105 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| CEP99_RS25615 () | 68350..69003 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| CEP99_RS26330 () | 68993..69139 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| CEP99_RS25620 () | 69136..70035 | + | 900 | WP_000990048.1 | YjiK family protein | - |
| CEP99_RS25625 () | 70125..70682 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| CEP99_RS25630 () | 70949..71707 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| CEP99_RS25635 () | 71804..72025 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| CEP99_RS25645 () | 72885..73766 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| CEP99_RS25650 () | 73747..73824 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| CEP99_RS25655 () | 74074..74340 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| CEP99_RS25665 () | 74519..74961 | - | 443 | Protein_96 | phospholipase | - |
| CEP99_RS25670 () | 75127..75282 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| CEP99_RS25675 () | 75295..75579 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| CEP99_RS25680 () | 75694..76257 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| CEP99_RS25685 () | 76312..77052 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| CEP99_RS25690 () | 77072..82330 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| CEP99_RS25695 () | 82412..82639 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| CEP99_RS25700 () | 82639..83037 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CEP99_RS25705 () | 83046..85208 | - | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| CEP99_RS25710 () | 85585..86316 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| CEP99_RS25715 () | 86352..86846 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| CEP99_RS25720 () | 86862..89684 | - | 2823 | WP_001007087.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CEP99_RS25725 () | 89681..91063 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| CEP99_RS25730 () | 91053..91601 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CEP99_RS25735 () | 91588..91881 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CEP99_RS25740 () | 92095..92844 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CEP99_RS25745 () | 92856..93071 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|