MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 173817 bp
Accession: NZ_CP022063 Location: 1..173817 Organism: Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain FDAARGOS_312 Replicon: plasmid unnamed3
Accession: NZ_CP022063 Location: 1..173817 Organism: Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain FDAARGOS_312 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP90_RS25370 () | 259..732 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| CEP90_RS25375 () | 829..1350 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| CEP90_RS25380 () | 1353..1874 | - | 522 | WP_020833599.1 | hypothetical protein | - |
| CEP90_RS25385 () | 1879..2487 | - | 609 | WP_020833598.1 | hypothetical protein | - |
| CEP90_RS25390 () | 2756..3871 | + | 1116 | WP_020833597.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| CEP90_RS25395 () | 3889..4338 | + | 450 | WP_020833596.1 | hypothetical protein | - |
| CEP90_RS25410 () | 5375..6475 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| CEP90_RS25415 () | 6460..6747 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| CEP90_RS25420 () | 6752..7291 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| CEP90_RS25425 () | 7790..8773 | + | 984 | WP_052713385.1 | ParM/StbA family protein | - |
| CEP90_RS25430 () | 8790..9083 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| CEP90_RS25435 () | 9085..9504 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| CEP90_RS25440 () | 9564..10115 | - | 552 | WP_001020646.1 | hypothetical protein | - |
| CEP90_RS25445 () | 10112..10720 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| CEP90_RS25450 () | 10731..11264 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| CEP90_RS25455 () | 11264..11536 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| CEP90_RS25460 () | 12252..12614 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| CEP90_RS25465 () | 12652..16266 | - | 3615 | WP_020833673.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CEP90_RS25470 () | 16279..17712 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| CEP90_RS25475 () | 17714..18754 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| CEP90_RS25480 () | 18865..20376 | - | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| CEP90_RS25490 () | 20663..21703 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| CEP90_RS25495 () | 21865..22740 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| CEP90_RS25500 () | 23067..23558 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| CEP90_RS25505 () | 23555..24424 | - | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| CEP90_RS25510 () | 24429..25439 | - | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| CEP90_RS25515 () | 25442..25978 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| CEP90_RS25525 () | 26277..26558 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| CEP90_RS25530 () | 26819..26908 | + | 90 | Protein_29 | NAD(P)-dependent oxidoreductase | - |
| CEP90_RS25540 () | 27493..28353 | - | 861 | WP_020833670.1 | alpha/beta hydrolase | - |
| CEP90_RS25545 () | 28438..29925 | - | 1488 | WP_020833669.1 | PhoPQ-regulated protein | - |
| CEP90_RS25550 () | 30160..30459 | - | 300 | WP_020833668.1 | hypothetical protein | - |
| CEP90_RS25555 () | 31117..32448 | - | 1332 | WP_020833667.1 | yersiniabactin biosynthesis salicylate synthase YbtS | - |
| CEP90_RS25560 () | 32476..33756 | - | 1281 | WP_020833666.1 | yersiniabactin-associated zinc MFS transporter YbtX | - |
| CEP90_RS25565 () | 33749..35551 | - | 1803 | WP_023994191.1 | yersiniabactin ABC transporter ATP-binding/permease protein YbtQ | - |
| CEP90_RS25570 () | 35538..37250 | - | 1713 | WP_020833664.1 | yersiniabactin ABC transporter ATP-binding/permease protein YbtP | - |
| CEP90_RS25580 () | 37708..38667 | + | 960 | WP_020833663.1 | yersiniabactin transcriptional regulator YbtA | - |
| CEP90_RS25585 () | 38858..44965 | + | 6108 | WP_020833662.1 | yersiniabactin non-ribosomal peptide synthetase HMWP2 | - |
| CEP90_RS25590 () | 45053..54550 | + | 9498 | WP_020833661.1 | yersiniabactin polyketide synthase HMWP1 | - |
| CEP90_RS25595 () | 54547..55647 | + | 1101 | WP_020833660.1 | yersiniabactin biosynthesis oxidoreductase YbtU | - |
| CEP90_RS25600 () | 55644..56447 | + | 804 | WP_023994194.1 | yersiniabactin biosynthesis thioesterase YbtT | - |
| CEP90_RS25605 () | 56451..58028 | + | 1578 | WP_020833658.1 | yersiniabactin biosynthesis salycil-AMP ligase YbtE | - |
| CEP90_RS25610 () | 58159..60180 | + | 2022 | WP_020833657.1 | siderophore yersiniabactin receptor FyuA | - |
| CEP90_RS25615 () | 60516..61304 | - | 789 | WP_020833656.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CEP90_RS25620 () | 61803..62060 | - | 258 | WP_024143068.1 | hypothetical protein | - |
| CEP90_RS25625 () | 62484..62750 | + | 267 | Protein_46 | transposase | - |
| CEP90_RS25630 () | 62945..64141 | + | 1197 | WP_020833654.1 | methionine gamma-lyase | - |
| CEP90_RS25635 () | 64255..65553 | + | 1299 | WP_020833653.1 | amino acid permease | - |
| CEP90_RS25640 () | 65582..66796 | - | 1215 | WP_020833652.1 | sigma 54-interacting transcriptional regulator | - |
| CEP90_RS27300 () | 66733..67032 | - | 300 | WP_110613438.1 | helix-turn-helix domain-containing protein | - |
| CEP90_RS25650 () | 67306..67742 | + | 437 | Protein_51 | IS200/IS605 family transposase | - |
| CEP90_RS27465 () | 68032..68217 | - | 186 | WP_020833651.1 | hypothetical protein | - |
| CEP90_RS25660 () | 68354..69181 | + | 828 | WP_020833650.1 | streptomycin 3''-kinase | - |
| CEP90_RS25665 () | 69262..69558 | - | 297 | Protein_54 | transposase | - |
| CEP90_RS25670 () | 69654..71156 | + | 1503 | Protein_55 | IS21 family transposase | - |
| CEP90_RS27470 () | 71153..71906 | + | 754 | Protein_56 | ATP-binding protein | - |
| CEP90_RS25685 () | 71966..72873 | - | 908 | Protein_57 | IS256 family transposase | - |
| CEP90_RS25690 () | 73461..74576 | + | 1116 | WP_020833646.1 | DNA-binding protein | - |
| CEP90_RS27305 () | 75147..75278 | + | 132 | Protein_59 | reverse transcriptase N-terminal domain-containing protein | - |
| CEP90_RS25700 () | 75582..76259 | + | 678 | WP_001682408.1 | IS66-like element accessory protein TnpA | - |
| CEP90_RS25705 () | 76259..76606 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CEP90_RS25710 () | 76626..78197 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| CEP90_RS25715 () | 78232..79184 | - | 953 | Protein_63 | IS3 family transposase | - |
| CEP90_RS25720 () | 79498..80256 | - | 759 | WP_020833643.1 | EAL domain-containing protein | - |
| CEP90_RS25725 () | 80373..85052 | - | 4680 | WP_143182492.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| CEP90_RS25735 () | 85132..85530 | - | 399 | WP_038406196.1 | hypothetical protein | - |
| CEP90_RS25740 () | 86109..86546 | - | 438 | WP_000744305.1 | CaiF/GrlA family transcriptional regulator | - |
| CEP90_RS25745 () | 86675..87037 | - | 363 | WP_020833636.1 | hypothetical protein | - |
| CEP90_RS27475 () | 88461..88622 | - | 162 | WP_153247048.1 | hypothetical protein | - |
| CEP90_RS25760 () | 88981..89975 | + | 995 | Protein_70 | IS4 family transposase | - |
| CEP90_RS25765 () | 90029..90733 | - | 705 | WP_001067834.1 | IS6-like element IS26 family transposase | - |
| CEP90_RS25770 () | 90798..93572 | + | 2775 | Protein_72 | Tn3 family transposase | - |
| CEP90_RS25775 () | 93596..96448 | - | 2853 | Protein_73 | RHS repeat protein | - |
| CEP90_RS25780 () | 96689..97414 | - | 726 | WP_000988732.1 | hypothetical protein | - |
| CEP90_RS25785 () | 97528..97902 | - | 375 | WP_000868821.1 | hypothetical protein | - |
| CEP90_RS27480 () | 98023..98139 | - | 117 | WP_000338626.1 | hypothetical protein | - |
| CEP90_RS25790 () | 98149..98388 | - | 240 | WP_000714162.1 | permease | - |
| CEP90_RS25795 () | 98461..98739 | - | 279 | WP_000268337.1 | hypothetical protein | - |
| CEP90_RS25800 () | 98726..100453 | - | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| CEP90_RS25805 () | 100748..101860 | - | 1113 | WP_001300563.1 | IS4-like element IS421 family transposase | - |
| CEP90_RS25810 () | 101919..102296 | - | 378 | WP_001337696.1 | hypothetical protein | - |
| CEP90_RS25815 () | 102341..102532 | - | 192 | WP_000651508.1 | hypothetical protein | - |
| CEP90_RS25825 () | 102870..103322 | - | 453 | WP_001176699.1 | hypothetical protein | - |
| CEP90_RS25830 () | 103312..103701 | - | 390 | WP_000026577.1 | hypothetical protein | - |
| CEP90_RS25835 () | 103763..103987 | - | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| CEP90_RS25840 () | 104053..104937 | - | 885 | WP_000477209.1 | hypothetical protein | - |
| CEP90_RS25845 () | 105011..105511 | - | 501 | WP_000793769.1 | hypothetical protein | - |
| CEP90_RS25850 () | 105602..106141 | - | 540 | WP_000018872.1 | hypothetical protein | - |
| CEP90_RS25855 () | 106406..106741 | - | 336 | WP_001071288.1 | hypothetical protein | - |
| CEP90_RS25860 () | 106803..107219 | - | 417 | Protein_90 | VWA domain-containing protein | - |
| CEP90_RS25865 () | 107252..108865 | - | 1614 | WP_020833632.1 | IS66 family transposase | - |
| CEP90_RS25870 () | 108896..109246 | - | 351 | WP_001405209.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CEP90_RS25875 () | 109243..109662 | - | 420 | WP_004018134.1 | IS66 family insertion sequence hypothetical protein | - |
| CEP90_RS27485 () | 109713..109868 | - | 156 | WP_194887586.1 | hypothetical protein | - |
| CEP90_RS25880 () | 109865..110782 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| CEP90_RS25885 () | 110766..111392 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| CEP90_RS25890 () | 111389..111670 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| CEP90_RS25895 () | 111815..112192 | - | 378 | WP_000509509.1 | hypothetical protein | - |
| CEP90_RS25900 () | 112516..113178 | - | 663 | WP_058804901.1 | hypothetical protein | - |
| CEP90_RS25905 () | 113178..113555 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| CEP90_RS25910 () | 113565..114011 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| CEP90_RS25915 () | 114021..114650 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| CEP90_RS25920 () | 114607..115191 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| CEP90_RS25925 () | 115202..117067 | - | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| CEP90_RS25930 () | 117064..120036 | - | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| CEP90_RS25935 () | 120204..120821 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| CEP90_RS25940 () | 120803..121036 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| CEP90_RS25945 () | 121036..123228 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| CEP90_RS25950 () | 123243..123731 | + | 489 | WP_000467110.1 | hypothetical protein | - |
| CEP90_RS25955 () | 123822..124121 | - | 300 | WP_001326171.1 | hypothetical protein | - |
| CEP90_RS25965 () | 124333..124950 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| CEP90_RS25970 () | 125006..125662 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| CEP90_RS25975 () | 125662..127089 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| CEP90_RS25980 () | 127093..127593 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| CEP90_RS25985 () | 127602..127913 | - | 312 | WP_002210541.1 | hypothetical protein | - |
| CEP90_RS25990 () | 127919..128350 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| CEP90_RS25995 () | 128418..129092 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| CEP90_RS26000 () | 129067..129348 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| CEP90_RS26005 () | 129341..129718 | - | 378 | WP_020833627.1 | hypothetical protein | - |
| CEP90_RS27490 () | 130045..130188 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| CEP90_RS26010 () | 130280..130915 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| CEP90_RS26015 () | 130968..131240 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| CEP90_RS26020 () | 131289..132470 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| CEP90_RS26025 () | 132474..133259 | - | 786 | WP_001151305.1 | ParA family protein | - |
| CEP90_RS26030 () | 133433..133744 | - | 312 | WP_000380893.1 | hypothetical protein | - |
| CEP90_RS26040 () | 134051..134866 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| CEP90_RS26045 () | 134953..135195 | + | 243 | Protein_127 | phosphoglucosamine mutase | - |
| CEP90_RS26050 () | 135149..135400 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| CEP90_RS26055 () | 135431..135817 | - | 387 | Protein_129 | IS91 family transposase | - |
| CEP90_RS26060 () | 135803..135955 | + | 153 | Protein_130 | Tn3 family transposase | - |
| CEP90_RS26065 () | 136013..136255 | + | 243 | WP_000844627.1 | transposase | - |
| CEP90_RS26070 () | 136287..136937 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CEP90_RS26075 () | 137043..138242 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| CEP90_RS26080 () | 138274..139158 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| CEP90_RS26085 () | 139296..139703 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CEP90_RS26090 () | 139692..141449 | + | 1758 | Protein_136 | Tn3 family transposase | - |
| CEP90_RS26095 () | 141554..141988 | - | 435 | WP_011711644.1 | MerR family transcriptional regulator | - |
| CEP90_RS26100 () | 142008..142808 | - | 801 | WP_020833625.1 | EAL domain-containing protein | - |
| CEP90_RS26105 () | 142820..144487 | - | 1668 | WP_020833624.1 | mercury(II) reductase | - |
| CEP90_RS26110 () | 144525..144644 | - | 120 | Protein_140 | mercury transporter MerC | - |
| CEP90_RS26115 () | 144687..144962 | - | 276 | WP_020833622.1 | mercury resistance system periplasmic binding protein MerP | - |
| CEP90_RS26120 () | 145018..145365 | - | 348 | WP_007642845.1 | mercury transporter | - |
| CEP90_RS26125 () | 145460..145666 | - | 207 | Protein_143 | MerC family mercury resistance protein | - |
| CEP90_RS26130 () | 145675..146253 | - | 579 | WP_005413395.1 | sel1 repeat family protein | - |
| CEP90_RS26135 () | 146303..146608 | - | 306 | WP_020833619.1 | mercury resistance system periplasmic binding protein MerP | - |
| CEP90_RS26140 () | 146622..147017 | - | 396 | WP_020833618.1 | mercuric ion transporter MerT | - |
| CEP90_RS26145 () | 147089..147544 | + | 456 | WP_001166628.1 | Hg(II)-responsive transcriptional regulator | - |
| CEP90_RS26150 () | 147553..149457 | + | 1905 | WP_046072973.1 | ATP-dependent RecD-like DNA helicase | - |
| CEP90_RS26155 () | 149733..149939 | + | 207 | WP_020833616.1 | hypothetical protein | - |
| CEP90_RS26160 () | 149943..150731 | + | 789 | WP_020833615.1 | hypothetical protein | - |
| CEP90_RS26165 () | 151318..151749 | - | 432 | WP_024143060.1 | hypothetical protein | - |
| CEP90_RS26170 () | 151763..153007 | - | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| CEP90_RS26175 () | 153000..153362 | - | 363 | WP_001258026.1 | hypothetical protein | - |
| CEP90_RS26180 () | 153365..153607 | - | 243 | WP_001096360.1 | hypothetical protein | - |
| CEP90_RS26190 () | 153845..154042 | - | 198 | WP_000532167.1 | hypothetical protein | - |
| CEP90_RS26195 () | 154042..154980 | - | 939 | WP_020833613.1 | chromosome partitioning protein ParB | - |
| CEP90_RS26200 () | 155097..155642 | - | 546 | WP_000435225.1 | hypothetical protein | - |
| CEP90_RS26205 () | 155645..156214 | - | 570 | WP_001256126.1 | hypothetical protein | - |
| CEP90_RS26210 () | 156226..156789 | - | 564 | WP_020833612.1 | hypothetical protein | - |
| CEP90_RS26215 () | 156782..157210 | - | 429 | WP_000988988.1 | hypothetical protein | - |
| CEP90_RS26220 () | 157207..157554 | - | 348 | WP_000039129.1 | hypothetical protein | - |
| CEP90_RS26225 () | 157566..158750 | - | 1185 | WP_020833611.1 | hypothetical protein | - |
| CEP90_RS26230 () | 158744..158938 | - | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| CEP90_RS26235 () | 158987..159379 | - | 393 | WP_000018404.1 | hypothetical protein | - |
| CEP90_RS26240 () | 159441..160904 | - | 1464 | WP_001280522.1 | AAA family ATPase | - |
| CEP90_RS26245 () | 160978..161910 | - | 933 | WP_020833610.1 | hypothetical protein | - |
| CEP90_RS26255 () | 162472..162969 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| CEP90_RS26260 () | 162972..163460 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| CEP90_RS26265 () | 163557..163913 | + | 357 | WP_020833609.1 | hypothetical protein | - |
| CEP90_RS26270 () | 163922..164392 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| CEP90_RS26275 () | 164385..164756 | - | 372 | WP_020833608.1 | hypothetical protein | - |
| CEP90_RS26280 () | 164764..164958 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| CEP90_RS26290 () | 165299..165847 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| CEP90_RS26295 () | 166010..166360 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CEP90_RS26300 () | 166365..166667 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CEP90_RS26305 () | 166695..166988 | - | 294 | WP_020833606.1 | chromosome segregation protein ParM | - |
| CEP90_RS26310 () | 167077..167349 | - | 273 | WP_020833605.1 | HU family DNA-binding protein | - |
| CEP90_RS26315 () | 167407..167934 | - | 528 | WP_020833604.1 | thermonuclease family protein | - |
| CEP90_RS26325 () | 168165..169022 | - | 858 | WP_020833602.1 | hypothetical protein | - |
| CEP90_RS26330 () | 169009..169239 | - | 231 | WP_020833601.1 | hypothetical protein | - |
| CEP90_RS26335 () | 169239..169757 | - | 519 | WP_020833600.1 | hypothetical protein | - |
| CEP90_RS26340 () | 169754..170200 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| CEP90_RS26345 () | 170200..170559 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| CEP90_RS26350 () | 170616..171044 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| CEP90_RS26355 () | 171078..171938 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| CEP90_RS26360 () | 171954..172913 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| CEP90_RS26365 () | 172913..173767 | - | 855 | WP_000539393.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|