MGE detailed information
MGE type: Prophage MGE length: 119808 bp
Accession: NZ_CP022015 Location: 2577341..2697148 Organism: Salmonella enterica subsp. enterica serovar India str. SA20085604 Replicon: chromosome
Accession: NZ_CP022015 Location: 2577341..2697148 Organism: Salmonella enterica subsp. enterica serovar India str. SA20085604 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ16_RS13060 (2572568) | 2572568..2573782 | - | 1215 | WP_223353542.1 | diaminopropionate ammonia-lyase | - |
| LFZ16_RS13065 (2574148) | 2574148..2575914 | + | 1767 | WP_223353544.1 | sigma 54-interacting transcriptional regulator | - |
| LFZ16_RS13070 (2575949) | 2575949..2576750 | - | 802 | Protein_2570 | IS5 family transposase | - |
| LFZ16_RS13075 (2576879) | 2576879..2577250 | + | 372 | WP_223353546.1 | FaeA/PapI family transcriptional regulator | - |
| LFZ16_RS13080 (2577326) | 2577326..2579769 | + | 2444 | Protein_2572 | DEAD/DEAH box helicase family protein | - |
| LFZ16_RS13085 (2579833) | 2579833..2581296 | + | 1464 | WP_223353548.1 | N-6 DNA methylase | - |
| LFZ16_RS13090 (2581299) | 2581299..2581997 | + | 699 | WP_223353710.1 | restriction endonuclease subunit S | - |
| LFZ16_RS13095 (2581934) | 2581934..2582739 | - | 806 | Protein_2575 | IS5 family transposase | - |
| LFZ16_RS13100 (2582904) | 2582904..2583926 | + | 1023 | Protein_2576 | restriction endonuclease subunit S | - |
| LFZ16_RS13105 (2584636) | 2584636..2585172 | - | 537 | WP_223353550.1 | hypothetical protein | - |
| LFZ16_RS29630 (2585533) | 2585533..2585664 | - | 132 | Protein_2578 | antitermination protein | - |
| LFZ16_RS13115 (2586199) | 2586199..2587104 | + | 906 | Protein_2579 | fatty acid desaturase family protein | - |
| LFZ16_RS13120 (2587157) | 2587157..2588077 | + | 921 | WP_223353554.1 | DMT family transporter | - |
| LFZ16_RS13125 (2588156) | 2588156..2588293 | - | 138 | Protein_2581 | single-stranded DNA-binding protein | - |
| LFZ16_RS13130 (2589260) | 2589260..2590630 | + | 1371 | WP_223353556.1 | glycerol-3-phosphate transporter | - |
| LFZ16_RS13135 (2590671) | 2590671..2590912 | + | 242 | Protein_2583 | IS630 family transposase ISPlu19 | Transposase |
| LFZ16_RS13140 (2590919) | 2590919..2591350 | + | 432 | Protein_2584 | IS3 family transposase ISSde6 | Transposase |
| LFZ16_RS13145 (2592205) | 2592205..2592375 | - | 171 | WP_223353558.1 | hypothetical protein | - |
| LFZ16_RS13150 (2592843) | 2592843..2593187 | - | 345 | WP_223353560.1 | TonB family protein | - |
| LFZ16_RS13155 (2593210) | 2593210..2593482 | - | 273 | Protein_2587 | cell envelope integrity protein TolA | - |
| LFZ16_RS13160 (2594124) | 2594124..2595077 | - | 954 | WP_223353562.1 | hypothetical protein | VF |
| LFZ16_RS13165 (2595163) | 2595163..2595348 | - | 186 | WP_223353711.1 | AlpA family phage regulatory protein | - |
| LFZ16_RS13170 (2595474) | 2595474..2596736 | - | 1263 | WP_223353564.1 | hypothetical protein ; Integrase | Integrase |
| LFZ16_RS13175 (2596814) | 2596814..2597167 | - | 354 | WP_223353566.1 | hypothetical protein | - |
| LFZ16_RS13180 (2597324) | 2597324..2599471 | - | 2148 | WP_223353568.1 | portal protein | - |
| LFZ16_RS13185 (2599471) | 2599471..2601183 | - | 1713 | WP_223353570.1 | terminase | - |
| LFZ16_RS13190 (2601164) | 2601164..2601997 | - | 834 | WP_223353571.1 | terminase | - |
| LFZ16_RS29635 (2602255) | 2602255..2602719 | - | 465 | WP_263283793.1 | lysis protein | - |
| LFZ16_RS13205 (2602716) | 2602716..2603264 | - | 549 | WP_223353577.1 | lysozyme | - |
| LFZ16_RS13210 (2603242) | 2603242..2603475 | - | 234 | WP_223353578.1 | phage holin | - |
| LFZ16_RS13215 (2603734) | 2603734..2604231 | - | 498 | WP_223353579.1 | hypothetical protein | - |
| LFZ16_RS13220 (2604646) | 2604646..2604945 | - | 300 | WP_223353580.1 | STAS-like domain-containing protein | - |
| LFZ16_RS13225 (2604942) | 2604942..2605916 | - | 975 | WP_223353581.1 | hypothetical protein | - |
| LFZ16_RS13230 (2606055) | 2606055..2606816 | - | 762 | WP_223353582.1 | Bro-N domain-containing protein | - |
| LFZ16_RS13235 (2607072) | 2607072..2607413 | - | 342 | WP_223353583.1 | hypothetical protein | - |
| LFZ16_RS13240 (2607629) | 2607629..2607895 | - | 267 | WP_223353584.1 | hypothetical protein | - |
| LFZ16_RS13245 (2608072) | 2608072..2608350 | + | 279 | WP_223353586.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LFZ16_RS13250 (2608350) | 2608350..2608634 | + | 285 | WP_223353588.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LFZ16_RS13255 (2608645) | 2608645..2609049 | - | 405 | WP_223353590.1 | antiterminator Q family protein | - |
| LFZ16_RS13260 (2609066) | 2609066..2609344 | - | 279 | WP_223353712.1 | hypothetical protein | - |
| LFZ16_RS13265 (2609352) | 2609352..2609549 | - | 198 | WP_223353592.1 | hypothetical protein | - |
| LFZ16_RS13270 (2609554) | 2609554..2610123 | - | 570 | WP_223353594.1 | DUF1367 family protein | - |
| LFZ16_RS13275 (2610128) | 2610128..2610283 | - | 156 | WP_223353596.1 | hypothetical protein | - |
| LFZ16_RS13280 (2610295) | 2610295..2610546 | - | 252 | WP_223353598.1 | hypothetical protein | - |
| LFZ16_RS13285 (2610543) | 2610543..2611907 | - | 1365 | WP_223353600.1 | replicative DNA helicase | - |
| LFZ16_RS13290 (2611904) | 2611904..2612860 | - | 957 | WP_223353602.1 | hypothetical protein | - |
| LFZ16_RS13295 (2612860) | 2612860..2613168 | - | 309 | WP_223353604.1 | hypothetical protein | - |
| LFZ16_RS13300 (2613338) | 2613338..2613745 | - | 408 | WP_223353606.1 | hypothetical protein | - |
| LFZ16_RS13305 (2613738) | 2613738..2614361 | - | 624 | WP_223353608.1 | Rha family transcriptional regulator | - |
| LFZ16_RS13310 (2614358) | 2614358..2614666 | - | 309 | WP_223353610.1 | hypothetical protein | - |
| LFZ16_RS13315 (2614748) | 2614748..2615032 | + | 285 | WP_223353611.1 | hypothetical protein | - |
| LFZ16_RS13320 (2614989) | 2614989..2615489 | - | 501 | WP_223353613.1 | hypothetical protein | - |
| LFZ16_RS13325 (2615486) | 2615486..2615824 | - | 339 | WP_223353615.1 | hypothetical protein | - |
| LFZ16_RS13330 (2615821) | 2615821..2616063 | - | 243 | WP_223353617.1 | YdaS family helix-turn-helix protein | - |
| LFZ16_RS13335 (2616188) | 2616188..2616877 | + | 690 | WP_223353632.1 | helix-turn-helix transcriptional regulator | - |
| LFZ16_RS13340 (2617068) | 2617068..2617517 | + | 450 | WP_223353634.1 | helix-turn-helix domain-containing protein | - |
| LFZ16_RS13345 (2617514) | 2617514..2618218 | + | 705 | WP_223353636.1 | hypothetical protein | VF |
| LFZ16_RS13350 (2618226) | 2618226..2618471 | + | 246 | WP_223353638.1 | hypothetical protein | - |
| LFZ16_RS13355 (2618690) | 2618690..2618905 | - | 216 | WP_223353640.1 | hypothetical protein | - |
| LFZ16_RS13360 (2619026) | 2619026..2619223 | + | 198 | WP_223353642.1 | hypothetical protein | - |
| LFZ16_RS13365 (2619204) | 2619204..2619443 | + | 240 | WP_223353643.1 | hypothetical protein | - |
| LFZ16_RS13370 (2619563) | 2619563..2619895 | + | 333 | WP_223353644.1 | hypothetical protein | - |
| LFZ16_RS13375 (2620027) | 2620027..2620374 | + | 348 | WP_223353645.1 | hypothetical protein | - |
| LFZ16_RS13380 (2620374) | 2620374..2620961 | + | 588 | WP_223353757.1 | hypothetical protein | - |
| LFZ16_RS13385 (2620973) | 2620973..2621836 | + | 864 | WP_223353646.1 | ORF6N domain-containing protein | - |
| LFZ16_RS13390 (2621836) | 2621836..2622090 | + | 255 | WP_223353647.1 | hypothetical protein | - |
| LFZ16_RS13395 (2622087) | 2622087..2622312 | + | 226 | Protein_2634 | hypothetical protein | - |
| LFZ16_RS13400 (2622309) | 2622309..2622815 | + | 507 | WP_223353648.1 | hypothetical protein | - |
| LFZ16_RS13405 (2622812) | 2622812..2623228 | + | 417 | WP_223353199.1 | hypothetical protein | - |
| LFZ16_RS13410 (2623221) | 2623221..2623454 | + | 234 | WP_223353198.1 | hypothetical protein | - |
| LFZ16_RS13415 (2623457) | 2623457..2623762 | + | 306 | WP_223353649.1 | hypothetical protein | - |
| LFZ16_RS13420 (2623759) | 2623759..2623974 | + | 216 | WP_223353650.1 | hypothetical protein | - |
| LFZ16_RS13425 (2623977) | 2623977..2624156 | + | 180 | WP_223353652.1 | hypothetical protein | - |
| LFZ16_RS13430 (2624319) | 2624319..2624531 | + | 213 | WP_223353654.1 | excisionase | - |
| LFZ16_RS13435 (2624486) | 2624486..2625682 | + | 1197 | WP_223353656.1 | hypothetical protein ; Integrase | Integrase |
| LFZ16_RS13440 (2626071) | 2626071..2626292 | - | 222 | Protein_2643 | helix-turn-helix domain-containing protein | - |
| LFZ16_RS13445 (2626320) | 2626320..2626859 | - | 540 | WP_000388872.1 | phase 1 flagellin gene repressor FljA | - |
| LFZ16_RS13450 (2626927) | 2626927..2628447 | - | 1521 | WP_000079796.1 | hypothetical protein | VF |
| LFZ16_RS13455 (2628539) | 2628539..2629111 | + | 573 | WP_000190917.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| LFZ16_RS13460 (2630074) | 2630074..2631189 | + | 1116 | WP_001221110.1 | hypothetical protein | VF |
| LFZ16_RS13465 (2631270) | 2631270..2634926 | + | 3657 | WP_023212149.1 | hypothetical protein | VF |
| LFZ16_RS13470 (2635036) | 2635036..2636280 | + | 1245 | WP_001239927.1 | hypothetical protein | VF |
| LFZ16_RS13475 (2636312) | 2636312..2637247 | + | 936 | WP_023212490.1 | hypothetical protein | VF |
| LFZ16_RS13480 (2637289) | 2637289..2639469 | - | 2181 | WP_049883884.1 | hypothetical protein | VF |
| LFZ16_RS13485 (2640506) | 2640506..2641558 | - | 1053 | WP_023212488.1 | hypothetical protein | VF |
| LFZ16_RS13490 (2642076) | 2642076..2643005 | + | 930 | WP_000178742.1 | VirK family antimicrobial peptide resistance protein | - |
| LFZ16_RS13495 (2643299) | 2643299..2644195 | + | 897 | WP_000701508.1 | hypothetical protein | VF |
| LFZ16_RS13500 (2644917) | 2644917..2645930 | - | 1014 | WP_001059351.1 | HoxN/HupN/NixA family nickel/cobalt transporter | - |
| LFZ16_RS13505 (2646063) | 2646063..2647478 | - | 1416 | WP_000872340.1 | sensor histidine kinase | - |
| LFZ16_RS13510 (2647465) | 2647465..2648139 | - | 675 | WP_001237934.1 | hypothetical protein | VF |
| LFZ16_RS13515 (2648294) | 2648294..2649271 | + | 978 | WP_000744413.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| LFZ16_RS13520 (2649283) | 2649283..2649717 | + | 435 | WP_077905333.1 | tripartite tricarboxylate transporter TctB family protein | - |
| LFZ16_RS13525 (2649728) | 2649728..2651242 | + | 1515 | WP_000382034.1 | tripartite tricarboxylate transporter permease | - |
| LFZ16_RS13530 (2651545) | 2651545..2652522 | + | 978 | WP_023212486.1 | glutarate dioxygenase GlaH | - |
| LFZ16_RS13535 (2652548) | 2652548..2653816 | + | 1269 | WP_023212485.1 | L-2-hydroxyglutarate oxidase | - |
| LFZ16_RS13540 (2653838) | 2653838..2655286 | + | 1449 | WP_001176532.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| LFZ16_RS13545 (2655301) | 2655301..2656584 | + | 1284 | WP_001095565.1 | hypothetical protein | VF |
| LFZ16_RS13550 (2656715) | 2656715..2658115 | + | 1401 | WP_000531288.1 | GABA permease | - |
| LFZ16_RS13555 (2658157) | 2658157..2658834 | + | 678 | WP_000126152.1 | DNA-binding transcriptional regulator CsiR | - |
| LFZ16_RS13560 (2658856) | 2658856..2659305 | - | 450 | WP_000522406.1 | peptidoglycan-binding protein LysM | - |
| LFZ16_RS13565 (2659405) | 2659405..2659563 | - | 159 | WP_000508175.1 | YqaE/Pmp3 family membrane protein | - |
| LFZ16_RS13570 (2659746) | 2659746..2660045 | + | 300 | WP_001749413.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LFZ16_RS13575 (2660055) | 2660055..2660582 | + | 528 | WP_000022015.1 | rhodanese family protein | - |
| LFZ16_RS13580 (2660661) | 2660661..2660840 | + | 180 | WP_000494935.1 | hypothetical protein | - |
| LFZ16_RS13585 (2660930) | 2660930..2661331 | - | 402 | WP_001051100.1 | DNA-binding protein StpA | - |
| LFZ16_RS13590 (2662231) | 2662231..2662680 | + | 450 | WP_000492669.1 | L-alanine exporter AlaE | - |
| LFZ16_RS13595 (2662715) | 2662715..2663065 | - | 351 | WP_000281304.1 | DUF2002 family protein | - |
| LFZ16_RS13600 (2663227) | 2663227..2663553 | + | 327 | WP_001519557.1 | DUF883 domain-containing protein | - |
| LFZ16_RS13605 (2663637) | 2663637..2664971 | - | 1335 | WP_001528710.1 | PLP-dependent aminotransferase family protein | - |
| LFZ16_RS13610 (2665060) | 2665060..2665491 | + | 432 | WP_000209807.1 | carboxymuconolactone decarboxylase family protein | - |
| LFZ16_RS13615 (2665762) | 2665762..2666007 | + | 246 | WP_000028870.1 | glutaredoxin-like protein NrdH | - |
| LFZ16_RS13620 (2666004) | 2666004..2666414 | + | 411 | WP_001275401.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| LFZ16_RS13625 (2666387) | 2666387..2668531 | + | 2145 | WP_024138323.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| LFZ16_RS13630 (2668542) | 2668542..2669501 | + | 960 | WP_023212484.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| LFZ16_RS13635 (2669856) | 2669856..2671058 | + | 1203 | WP_000985534.1 | hypothetical protein | VF |
| LFZ16_RS13640 (2671051) | 2671051..2672115 | + | 1065 | WP_023212483.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| LFZ16_RS13645 (2672185) | 2672185..2673180 | + | 996 | WP_001216613.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| LFZ16_RS13650 (2673345) | 2673345..2674529 | + | 1185 | WP_023212482.1 | MFS transporter | - |
| LFZ16_RS13655 (2675026) | 2675026..2675556 | + | 531 | WP_000378431.1 | hypothetical protein | VF |
| LFZ16_RS13660 (2675683) | 2675683..2676855 | + | 1173 | WP_001275603.1 | hypothetical protein | VF |
| LFZ16_RS13665 (2676872) | 2676872..2678404 | + | 1533 | WP_079812986.1 | hypothetical protein | VF |
| LFZ16_RS13670 (2678453) | 2678453..2679823 | - | 1371 | WP_023212481.1 | carbohydrate porin | - |
| LFZ16_RS13675 (2680169) | 2680169..2680684 | - | 516 | WP_023212480.1 | hypothetical protein | VF |
| LFZ16_RS13680 (2680834) | 2680834..2682390 | - | 1557 | WP_000611821.1 | glutamate--cysteine ligase | - |
| LFZ16_RS13685 (2682467) | 2682467..2682892 | - | 426 | WP_023212479.1 | YqaA family protein | - |
| LFZ16_RS13690 (2682889) | 2682889..2683455 | - | 567 | WP_000271296.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| LFZ16_RS13720 (2684731) | 2684731..2684916 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| LFZ16_RS13725 (2685151) | 2685151..2687781 | - | 2631 | WP_223353658.1 | alanine--tRNA ligase | - |
| LFZ16_RS13730 (2688017) | 2688017..2688517 | - | 501 | WP_001294867.1 | recombination regulator RecX | - |
| LFZ16_RS13735 (2688634) | 2688634..2689695 | - | 1062 | WP_000963150.1 | recombinase RecA | - |
| LFZ16_RS13740 (2689780) | 2689780..2690277 | - | 498 | WP_000132239.1 | nicotinamide-nucleotide amidase | - |
| LFZ16_RS13745 (2690472) | 2690472..2690717 | + | 246 | WP_000053775.1 | hypothetical protein | - |
| LFZ16_RS13750 (2690755) | 2690755..2691834 | - | 1080 | WP_000476811.1 | lytic murein transglycosylase B | - |
| LFZ16_RS13755 (2692087) | 2692087..2692650 | + | 564 | WP_000573333.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| LFZ16_RS13760 (2692647) | 2692647..2693618 | + | 972 | WP_000199042.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| LFZ16_RS13765 (2693630) | 2693630..2693992 | + | 363 | WP_000111553.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| LFZ16_RS13770 (2694004) | 2694004..2694783 | + | 780 | WP_001077372.1 | sorbitol-6-phosphate dehydrogenase | - |
| LFZ16_RS13775 (2694860) | 2694860..2695219 | + | 360 | WP_000255198.1 | transcriptional regulator GutM | - |
| LFZ16_RS13780 (2695417) | 2695417..2696190 | + | 774 | WP_000804536.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| LFZ16_RS13785 (2696183) | 2696183..2697148 | + | 966 | WP_001278204.1 | hypothetical protein | VF |
| LFZ16_RS13790 (2697145) | 2697145..2698665 | - | 1521 | WP_223353659.1 | nitric oxide reductase transcriptional regulator NorR | - |
| LFZ16_RS13795 (2698851) | 2698851..2700290 | + | 1440 | WP_023212167.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| LFZ16_RS13800 (2700287) | 2700287..2701420 | + | 1134 | WP_023212168.1 | NADH:flavorubredoxin reductase NorW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|