MGE detailed information
MGE type: Prophage MGE length: 69708 bp
Accession: NZ_CP021911 Location: 2375277..2444984 Organism: Bacillus sp. MD-5 Replicon: chromosome
Accession: NZ_CP021911 Location: 2375277..2444984 Organism: Bacillus sp. MD-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO84_RS11860 () | 2370365..2370721 | - | 357 | WP_014664671.1 | ribosome silencing factor | - |
| CDO84_RS11865 () | 2370739..2371299 | - | 561 | WP_014664672.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| CDO84_RS11870 () | 2371289..2371858 | - | 570 | WP_014664673.1 | nicotinate-nucleotide adenylyltransferase | - |
| CDO84_RS11875 () | 2371870..2372160 | - | 291 | WP_014664674.1 | ribosome assembly RNA-binding protein YhbY | - |
| CDO84_RS11880 () | 2372154..2372996 | - | 843 | WP_014664675.1 | shikimate dehydrogenase | - |
| CDO84_RS11885 () | 2373014..2374114 | - | 1101 | WP_040082573.1 | ribosome biogenesis GTPase YqeH | - |
| CDO84_RS11890 () | 2374118..2374636 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| CDO84_RS11895 () | 2374998..2375138 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| CDO84_RS11900 () | 2375444..2376175 | - | 732 | WP_014664678.1 | SGNH/GDSL hydrolase family protein | - |
| CDO84_RS11905 () | 2376608..2377234 | + | 627 | WP_040082572.1 | TVP38/TMEM64 family protein | - |
| CDO84_RS11910 () | 2377253..2377688 | - | 436 | Protein_2322 | hypothetical protein | - |
| CDO84_RS11915 () | 2377925..2378647 | + | 723 | WP_040083764.1 | hypothetical protein | - |
| CDO84_RS11920 () | 2378680..2379090 | - | 411 | WP_014664682.1 | sporulation-specific Dnase NucB | - |
| CDO84_RS11925 () | 2379287..2379634 | + | 348 | Protein_2325 | sigma-70 family RNA polymerase sigma factor | - |
| CDO84_RS11930 () | 2379665..2381167 | - | 1503 | WP_010886573.1 | hypothetical protein ; Integrase | Integrase |
| CDO84_RS11940 () | 2381919..2382512 | - | 594 | WP_080528950.1 | TetR/AcrR family transcriptional regulator | - |
| CDO84_RS11945 () | 2382671..2383666 | + | 996 | WP_088299191.1 | L-threonine 3-dehydrogenase | VF |
| CDO84_RS11950 () | 2383906..2384072 | + | 167 | Protein_2329 | DUF255 domain-containing protein | - |
| CDO84_RS11955 () | 2384315..2385079 | - | 765 | WP_088299192.1 | YqcI/YcgG family protein | - |
| CDO84_RS11960 () | 2385577..2386449 | - | 873 | WP_088299193.1 | collagen-like protein | - |
| CDO84_RS11965 () | 2386500..2386847 | - | 348 | WP_040082472.1 | DUF3992 domain-containing protein | - |
| CDO84_RS11970 () | 2386923..2387606 | - | 684 | WP_052438148.1 | hypothetical protein | - |
| CDO84_RS11975 () | 2388089..2389465 | + | 1377 | WP_088299194.1 | hypothetical protein | VF |
| CDO84_RS11980 () | 2389462..2390568 | + | 1107 | WP_040082470.1 | hypothetical protein | VF |
| CDO84_RS11985 () | 2390555..2391262 | + | 708 | WP_052438147.1 | class I SAM-dependent methyltransferase | - |
| CDO84_RS11990 () | 2391259..2391930 | + | 672 | WP_040082469.1 | glycosyltransferase family protein | - |
| CDO84_RS11995 () | 2392163..2393191 | + | 1029 | WP_198297993.1 | collagen-like protein | - |
| CDO84_RS21410 () | 2393227..2393571 | + | 345 | WP_156122884.1 | hypothetical protein | - |
| CDO84_RS12000 () | 2393794..2394366 | - | 573 | WP_040082467.1 | cupin domain-containing protein | - |
| CDO84_RS12010 () | 2394559..2394744 | - | 186 | Protein_2341 | hypothetical protein | - |
| CDO84_RS12015 () | 2395143..2396270 | + | 1128 | WP_040082465.1 | response regulator aspartate phosphatase RapE | - |
| CDO84_RS12020 () | 2396260..2396394 | + | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| CDO84_RS12025 () | 2396618..2398510 | + | 1893 | WP_040082464.1 | EndoU domain-containing protein | - |
| CDO84_RS12030 () | 2398532..2398891 | + | 360 | WP_040082462.1 | hypothetical protein | - |
| CDO84_RS12035 () | 2398943..2399266 | + | 324 | Protein_2346 | tRNA-Val4 | - |
| CDO84_RS12040 () | 2399327..2399716 | + | 390 | WP_052438144.1 | SMI1/KNR4 family protein | - |
| CDO84_RS21585 () | 2399724..2399938 | + | 215 | Protein_2348 | hypothetical protein | - |
| CDO84_RS12050 () | 2399984..2400307 | - | 324 | WP_039076474.1 | hypothetical protein | - |
| CDO84_RS12055 () | 2400467..2401114 | + | 648 | Protein_2350 | hypothetical protein | - |
| CDO84_RS12060 () | 2401189..2402163 | - | 975 | WP_040082461.1 | hypothetical protein | VF |
| CDO84_RS12065 () | 2402208..2402630 | - | 423 | WP_040082459.1 | holin family protein | - |
| CDO84_RS12070 () | 2402676..2403569 | - | 894 | WP_040082458.1 | hypothetical protein | - |
| CDO84_RS12075 () | 2403657..2403821 | - | 165 | WP_040082457.1 | XkdX family protein | - |
| CDO84_RS12080 () | 2403818..2404153 | - | 336 | WP_040082456.1 | XkdW family protein | - |
| CDO84_RS12085 () | 2404163..2405257 | - | 1095 | WP_040082454.1 | hypothetical protein | - |
| CDO84_RS12090 () | 2405261..2405533 | - | 273 | WP_040082452.1 | hypothetical protein | - |
| CDO84_RS12095 () | 2405530..2406108 | - | 579 | WP_040082450.1 | DUF2313 domain-containing protein | - |
| CDO84_RS12100 () | 2406092..2407138 | - | 1047 | WP_040082448.1 | baseplate J/gp47 family protein | - |
| CDO84_RS12105 () | 2407131..2407556 | - | 426 | WP_040082447.1 | DUF2634 domain-containing protein | - |
| CDO84_RS12110 () | 2407569..2407835 | - | 267 | WP_040082446.1 | DUF2577 domain-containing protein | - |
| CDO84_RS12115 () | 2407832..2408812 | - | 981 | WP_040082444.1 | hypothetical protein | - |
| CDO84_RS12120 () | 2408826..2409485 | - | 660 | WP_019715086.1 | LysM peptidoglycan-binding domain-containing protein | - |
| CDO84_RS12125 () | 2409478..2414235 | - | 4758 | WP_040082442.1 | transglycosylase SLT domain-containing protein | - |
| CDO84_RS12130 () | 2414238..2414375 | - | 138 | WP_021480099.1 | hypothetical protein | - |
| CDO84_RS12135 () | 2414417..2414866 | - | 450 | WP_024122156.1 | phage portal protein | - |
| CDO84_RS12140 () | 2415012..2415191 | + | 180 | WP_024122157.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - () | 2415115..2415335 | - | 221 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2415115..2415335 | - | 221 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2415115..2415335 | - | 221 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2415115..2415335 | - | 221 | NuclAT_0 | - | Antitoxin Detail |
| CDO84_RS21415 () | 2415571..2415660 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| CDO84_RS12150 () | 2415953..2416396 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| CDO84_RS12155 () | 2416399..2417799 | - | 1401 | WP_040082441.1 | phage tail sheath family protein | - |
| CDO84_RS12160 () | 2417800..2417991 | - | 192 | WP_082032961.1 | hypothetical protein | - |
| CDO84_RS12165 () | 2417988..2418425 | - | 438 | WP_040082440.1 | hypothetical protein | - |
| CDO84_RS12170 () | 2418438..2418941 | - | 504 | WP_040082439.1 | HK97 gp10 family phage protein | - |
| CDO84_RS12175 () | 2418938..2419300 | - | 363 | WP_040082438.1 | YqbH/XkdH family protein | - |
| CDO84_RS12180 () | 2419297..2419692 | - | 396 | WP_015714318.1 | DUF3199 family protein | - |
| CDO84_RS12185 () | 2419697..2420008 | - | 312 | WP_040082437.1 | YqbF domain-containing protein | - |
| CDO84_RS12190 () | 2420019..2420954 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| CDO84_RS12195 () | 2420973..2421944 | - | 972 | WP_040082429.1 | phage portal protein | - |
| CDO84_RS12200 () | 2422101..2423006 | - | 906 | WP_040082428.1 | hypothetical protein | - |
| CDO84_RS12205 () | 2423051..2423968 | - | 918 | WP_040082427.1 | phage head morphogenesis protein | - |
| CDO84_RS12210 () | 2423965..2425497 | - | 1533 | WP_040082426.1 | phage portal protein | - |
| CDO84_RS12215 () | 2425501..2426796 | - | 1296 | WP_082032960.1 | PBSX family phage terminase large subunit | - |
| CDO84_RS12220 () | 2426789..2427508 | - | 720 | WP_040082425.1 | hypothetical protein | - |
| CDO84_RS12225 () | 2427576..2428040 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| CDO84_RS12230 () | 2428184..2428639 | - | 456 | WP_040082424.1 | hypothetical protein | - |
| CDO84_RS12235 () | 2428732..2429184 | - | 453 | WP_040082422.1 | hypothetical protein | - |
| CDO84_RS12240 () | 2429253..2429921 | - | 669 | WP_040082421.1 | hypothetical protein | - |
| CDO84_RS12245 () | 2430184..2430543 | + | 360 | WP_040082420.1 | hypothetical protein | - |
| CDO84_RS12250 () | 2430691..2430900 | - | 210 | WP_040082419.1 | XtrA/YqaO family protein | - |
| CDO84_RS12255 () | 2430982..2431410 | - | 429 | WP_040082418.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CDO84_RS12260 () | 2431506..2431655 | - | 150 | WP_080332533.1 | hypothetical protein | - |
| CDO84_RS12265 () | 2431646..2432587 | - | 942 | WP_082032959.1 | ATP-binding protein | - |
| CDO84_RS12270 () | 2432469..2433146 | - | 678 | WP_156122886.1 | DnaD domain protein | - |
| CDO84_RS12275 () | 2433223..2434077 | - | 855 | WP_040082413.1 | recombinase RecT | - |
| CDO84_RS12280 () | 2434080..2435039 | - | 960 | WP_021480130.1 | YqaJ viral recombinase family protein | - |
| CDO84_RS12285 () | 2435146..2435340 | - | 195 | WP_021480131.1 | hypothetical protein | - |
| CDO84_RS21420 () | 2435300..2435473 | - | 174 | WP_156122885.1 | hypothetical protein | - |
| CDO84_RS12290 () | 2435470..2435727 | - | 258 | WP_021480132.1 | hypothetical protein | - |
| CDO84_RS12295 () | 2435724..2436293 | - | 570 | WP_015714341.1 | helix-turn-helix transcriptional regulator | - |
| CDO84_RS12300 () | 2436367..2436507 | - | 141 | WP_032725213.1 | hypothetical protein | - |
| CDO84_RS12305 () | 2436510..2436749 | - | 240 | WP_032722187.1 | hypothetical protein | VF |
| CDO84_RS12310 () | 2436905..2437258 | + | 354 | WP_021480133.1 | helix-turn-helix domain-containing protein | - |
| CDO84_RS12315 () | 2437524..2437691 | - | 168 | WP_052438142.1 | hypothetical protein | - |
| CDO84_RS12320 () | 2437948..2438466 | + | 519 | WP_040082410.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CDO84_RS12325 () | 2438472..2438864 | + | 393 | Protein_2405 | sigma-70 family RNA polymerase sigma factor | - |
| CDO84_RS12330 () | 2438967..2439113 | - | 147 | Protein_2406 | recombinase family protein | - |
| CDO84_RS12340 () | 2439393..2440826 | + | 1434 | WP_014664691.1 | hypothetical protein | - |
| CDO84_RS12345 () | 2440925..2442892 | - | 1968 | WP_040082406.1 | hypothetical protein | - |
| CDO84_RS12350 () | 2443208..2444335 | + | 1128 | WP_040082405.1 | response regulator aspartate phosphatase RapE | - |
| CDO84_RS12355 () | 2444325..2444459 | + | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| CDO84_RS12360 () | 2444571..2444730 | + | 160 | Protein_2411 | hypothetical protein | - |
| CDO84_RS12365 () | 2445214..2446230 | - | 1017 | WP_040082403.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CDO84_RS12370 () | 2446359..2446940 | - | 582 | WP_040082402.1 | Crp/Fnr family transcriptional regulator | - |
| CDO84_RS12375 () | 2447345..2449270 | + | 1926 | WP_040082537.1 | DNA-binding protein | - |
| CDO84_RS12380 () | 2449284..2449571 | + | 288 | WP_040082400.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|