MGE detailed information
MGE type: Conjugative plasmid MGE length: 67973 bp
Accession: NZ_CP021882 Location: 1..67973 Organism: Escherichia coli strain AR_0137 Replicon: plasmid tig00001287_pilon
Accession: NZ_CP021882 Location: 1..67973 Organism: Escherichia coli strain AR_0137 Replicon: plasmid tig00001287_pilon
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM384_RS26055 () | 819..1516 | + | 698 | Protein_1 | IS1 family transposase | - |
| AM384_RS26060 () | 1530..1835 | - | 306 | Protein_2 | transcription termination factor NusG | - |
| AM384_RS26070 () | 2277..2564 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| AM384_RS26075 () | 2482..2745 | - | 264 | WP_032180564.1 | ash family protein | - |
| AM384_RS26090 () | 3717..4748 | + | 1032 | WP_023518831.1 | RepZ | - |
| AM384_RS27180 () | 5444..5584 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| AM384_RS26110 () | 5817..6326 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| AM384_RS26115 () | 6382..6984 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| AM384_RS26125 () | 7338..8684 | + | 1347 | WP_039052405.1 | hypothetical protein | - |
| AM384_RS27185 () | 9183..9485 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| AM384_RS26135 () | 9482..10108 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| AM384_RS26140 () | 10296..11567 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| AM384_RS26145 () | 11567..12004 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM384_RS26150 () | 12001..12249 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| AM384_RS26160 () | 12667..13569 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| AM384_RS26165 () | 13664..13999 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| AM384_RS26170 () | 14337..15317 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| AM384_RS26175 () | 15320..15742 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| AM384_RS26180 () | 15746..16056 | + | 311 | Protein_19 | hypothetical protein | - |
| AM384_RS26185 () | 16132..16815 | + | 684 | WP_000086127.1 | DNA methylase | - |
| AM384_RS26190 () | 16816..17037 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| AM384_RS26195 () | 17051..17485 | + | 435 | WP_011264065.1 | DUF1380 family protein | - |
| AM384_RS26960 () | 17530..18300 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| AM384_RS26210 () | 18841..19143 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| AM384_RS26215 () | 19190..19612 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| AM384_RS26220 () | 19609..19800 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AM384_RS26230 () | 19871..20185 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| AM384_RS26965 () | 20569..20643 | + | 75 | Protein_28 | single-stranded DNA-binding protein | - |
| AM384_RS26240 () | 20644..21933 | + | 1290 | Protein_29 | hypothetical protein | - |
| AM384_RS26245 () | 21986..22420 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| AM384_RS26250 () | 22417..23136 | + | 720 | WP_047149313.1 | plasmid SOS inhibition protein A | - |
| AM384_RS26255 () | 23133..23729 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| AM384_RS26265 () | 24191..24691 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| AM384_RS26280 () | 25420..25854 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| AM384_RS26285 () | 25948..26214 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| AM384_RS26290 () | 26391..26780 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| AM384_RS26295 () | 26777..27679 | + | 903 | WP_011264057.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| AM384_RS26300 () | 27741..27947 | + | 207 | WP_000150314.1 | hypothetical protein | - |
| AM384_RS26305 () | 27978..28229 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AM384_RS27190 () | 28263..28460 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| AM384_RS26320 () | 28809..29657 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| AM384_RS26325 () | 29744..30079 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| AM384_RS26330 () | 30313..30645 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| AM384_RS26335 () | 30656..33355 | + | 2700 | WP_011264053.1 | IncI1-type relaxase NikB | - |
| AM384_RS26340 () | 33393..35684 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| AM384_RS26345 () | 35677..36747 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| AM384_RS26350 () | 36766..37974 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 38154..38211 | - | 58 | NuclAT_1 | - | - |
| - () | 38154..38211 | - | 58 | NuclAT_1 | - | - |
| - () | 38154..38211 | - | 58 | NuclAT_1 | - | - |
| - () | 38154..38211 | - | 58 | NuclAT_1 | - | - |
| AM384_RS26355 () | 38281..39030 | - | 750 | Protein_48 | protein finQ | - |
| AM384_RS26360 () | 39259..39576 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AM384_RS26365 () | 39573..40106 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| AM384_RS26370 () | 40200..41345 | - | 1146 | WP_039023136.1 | class C extended-spectrum beta-lactamase CMY-42 | - |
| AM384_RS26375 () | 41798..42495 | - | 698 | Protein_52 | IS1 family transposase | - |
| AM384_RS26395 () | 43043..43726 | + | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| AM384_RS26400 () | 43898..44152 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| AM384_RS26415 () | 45199..46266 | + | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| AM384_RS26420 () | 46266..46703 | + | 438 | WP_000539806.1 | type IV pilus biogenesis protein PilM | - |
| AM384_RS26425 () | 46717..48399 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| AM384_RS26430 () | 48392..49687 | + | 1296 | Protein_58 | type 4b pilus protein PilO2 | - |
| AM384_RS26435 () | 49674..50126 | + | 453 | WP_001247337.1 | type IV pilus biogenesis protein PilP | - |
| AM384_RS26440 () | 50137..51690 | + | 1554 | WP_023518854.1 | Flp pilus assembly complex ATPase component TadA | - |
| AM384_RS26445 () | 51703..52788 | + | 1086 | WP_001208802.1 | type II secretion system F family protein | - |
| AM384_RS26450 () | 52805..53419 | + | 615 | WP_000908227.1 | type IV prepilin | - |
| AM384_RS26455 () | 53429..53989 | + | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| AM384_RS26460 () | 53974..54630 | + | 657 | WP_001401940.1 | prepilin peptidase | - |
| AM384_RS26465 () | 54630..55922 | + | 1293 | WP_001619585.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| AM384_RS26970 () | 55919..56167 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| AM384_RS26495 () | 57405..57560 | - | 156 | WP_001302705.1 | hypothetical protein | - |
| AM384_RS26500 () | 57688..58842 | + | 1155 | WP_001139955.1 | integrase | - |
| AM384_RS26505 () | 58993..59817 | + | 825 | WP_023518851.1 | hypothetical protein | - |
| AM384_RS26510 () | 59903..61105 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| AM384_RS26515 () | 61165..61749 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AM384_RS26975 () | 62144..62260 | + | 117 | Protein_72 | IncI1-type conjugal transfer lipoprotein TraH | - |
| AM384_RS26520 () | 62259..64013 | + | 1755 | Protein_73 | DotA/TraY family protein | - |
| AM384_RS26525 () | 64084..64746 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM384_RS26530 () | 64818..65027 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AM384_RS27195 () | 65419..65595 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| AM384_RS26535 () | 65660..65956 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| AM384_RS26540 () | 66256..66507 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| AM384_RS26545 () | 66579..66731 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 66783..66843 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66783..66843 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66783..66843 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66783..66843 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| AM384_RS26550 () | 67046..67393 | + | 348 | Protein_80 | protein finQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|