MGE detailed information
MGE type: Mobilizable plasmid MGE length: 92350 bp
Accession: NZ_CP021846 Location: 1..92350 Organism: Escherichia coli strain EC1515 Replicon: plasmid pEC1515-2
Accession: NZ_CP021846 Location: 1..92350 Organism: Escherichia coli strain EC1515 Replicon: plasmid pEC1515-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH89_RS26890 () | 158..799 | + | 642 | WP_001351995.1 | hypothetical protein | - |
| CDH89_RS26895 () | 902..2029 | + | 1128 | WP_071447930.1 | RelA/SpoT domain-containing protein | - |
| CDH89_RS26900 () | 2066..2314 | - | 249 | WP_000747845.1 | hypothetical protein | - |
| CDH89_RS26905 () | 2311..2751 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| CDH89_RS26910 () | 2871..4033 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| CDH89_RS26915 () | 4081..4485 | + | 405 | Protein_6 | IS1-like element IS1B family transposase | - |
| CDH89_RS26920 () | 4502..5374 | + | 873 | Protein_7 | IS3 family transposase ISEc31 | Transposase |
| CDH89_RS26925 () | 5385..6085 | + | 701 | Protein_8 | IS3 family transposase ISKpn38 | Transposase |
| CDH89_RS26930 () | 6147..6392 | + | 246 | Protein_9 | IS91 family transposase | - |
| CDH89_RS26935 () | 6976..10491 | + | 3516 | WP_072778934.1 | Outer membrane protein IcsA autotransporter | VF |
| CDH89_RS26940 () | 10666..10871 | - | 206 | Protein_11 | transposase | - |
| CDH89_RS26945 () | 10861..11061 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| CDH89_RS26950 () | 11351..11638 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDH89_RS26955 () | 11635..11886 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CDH89_RS26965 () | 12499..15357 | + | 2859 | WP_076751473.1 | helicase | - |
| CDH89_RS26970 () | 15368..16065 | - | 698 | Protein_16 | IS1 family transposase | - |
| CDH89_RS26980 () | 16229..17980 | - | 1752 | Protein_17 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CDH89_RS26990 () | 18145..18849 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH89_RS27000 () | 18961..19665 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH89_RS28400 () | 19716..19907 | - | 192 | Protein_20 | dihydropteroate synthase | - |
| CDH89_RS27010 () | 19901..20248 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CDH89_RS27015 () | 20412..21203 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CDH89_RS28405 () | 21209..21499 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| CDH89_RS27020 () | 21611..22108 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| CDH89_RS27025 () | 22256..23269 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CDH89_RS28615 () | 23472..23669 | + | 198 | Protein_26 | EAL domain-containing protein | - |
| CDH89_RS27035 () | 23737..24441 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CDH89_RS27040 () | 24584..25306 | - | 723 | WP_000133024.1 | hypothetical protein | - |
| CDH89_RS27045 () | 25303..25788 | - | 486 | WP_000071636.1 | hypothetical protein | - |
| CDH89_RS27050 () | 26545..27343 | + | 799 | Protein_30 | trhR | - |
| CDH89_RS27055 () | 27346..27857 | + | 512 | Protein_31 | hypothetical protein | - |
| CDH89_RS27060 () | 28470..29517 | + | 1048 | Protein_32 | thioredoxin family protein | - |
| CDH89_RS27065 () | 29507..29938 | + | 432 | Protein_33 | IncHI-type conjugal transfer protein TrhH | - |
| CDH89_RS27070 () | 29953..30420 | - | 468 | Protein_34 | IS3 family transposase | - |
| CDH89_RS27075 () | 30501..32009 | - | 1509 | WP_001352025.1 | group II intron reverse transcriptase/maturase | - |
| CDH89_RS27090 () | 32682..33107 | - | 426 | Protein_36 | IS3 family transposase | - |
| CDH89_RS27100 () | 33172..34323 | + | 1152 | WP_001254943.1 | IS30 family transposase IS30D | Transposase |
| CDH89_RS27110 () | 34429..35126 | + | 698 | Protein_38 | IS1 family transposase | - |
| CDH89_RS27115 () | 35141..35722 | - | 582 | Protein_39 | IS21 family transposase IS100kyp | Transposase |
| CDH89_RS27120 () | 35736..36108 | - | 373 | Protein_40 | IS1 family transposase | - |
| CDH89_RS27125 () | 36285..36989 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CDH89_RS27135 () | 37101..37805 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH89_RS27145 () | 37858..38160 | + | 303 | Protein_43 | cysteine hydrolase | - |
| CDH89_RS27150 () | 38298..39182 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CDH89_RS27155 () | 39214..40413 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CDH89_RS27160 () | 40519..41154 | + | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CDH89_RS27165 () | 41186..41428 | - | 243 | WP_000844627.1 | transposase | - |
| CDH89_RS27170 () | 41486..44452 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CDH89_RS27175 () | 44526..45230 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH89_RS27180 () | 45405..45620 | - | 216 | Protein_50 | transposase | - |
| CDH89_RS27195 () | 47364..47519 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| CDH89_RS27200 () | 47713..48824 | - | 1112 | Protein_53 | IS4 family transposase IS186B | Transposase |
| CDH89_RS27205 () | 48984..49493 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| CDH89_RS27210 () | 49505..50086 | - | 582 | WP_000035250.1 | hypothetical protein | - |
| CDH89_RS27215 () | 50122..50937 | - | 816 | WP_072779020.1 | hypothetical protein | - |
| CDH89_RS27220 () | 50947..52218 | - | 1272 | WP_000459149.1 | hypothetical protein | - |
| CDH89_RS27230 () | 53564..53872 | - | 309 | Protein_59 | hypothetical protein | - |
| CDH89_RS27235 () | 53932..55638 | - | 1707 | WP_000067707.1 | hypothetical protein | - |
| CDH89_RS27240 () | 55864..56865 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| CDH89_RS27245 () | 56882..58078 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| CDH89_RS27250 () | 58247..59056 | - | 810 | WP_001154682.1 | GIY-YIG nuclease family protein | - |
| CDH89_RS27255 () | 59349..60233 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| CDH89_RS27260 () | 60569..60961 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| CDH89_RS27265 () | 61137..61559 | - | 423 | WP_000007763.1 | hypothetical protein | - |
| CDH89_RS27270 () | 61599..62387 | - | 789 | WP_000890209.1 | hypothetical protein | - |
| CDH89_RS27275 () | 62562..63259 | + | 698 | Protein_68 | IS1 family transposase | - |
| CDH89_RS27280 () | 63266..63721 | + | 456 | Protein_69 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| CDH89_RS28620 () | 64465..65109 | + | 645 | WP_000973210.1 | hypothetical protein | - |
| CDH89_RS28625 () | 65116..65811 | + | 696 | WP_001135530.1 | maturase | - |
| CDH89_RS27305 () | 66171..67384 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| CDH89_RS27310 () | 67428..67718 | + | 291 | Protein_73 | IS200/IS605 family transposase | - |
| CDH89_RS27320 () | 68185..71658 | + | 3474 | WP_076751476.1 | cellulose biosynthesis protein BcsC | - |
| CDH89_RS27325 () | 71849..72547 | - | 699 | Protein_75 | IS3 family transposase IS2 | Transposase |
| CDH89_RS27330 () | 72666..73400 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| CDH89_RS27335 () | 73509..74206 | + | 698 | Protein_77 | IS1 family transposase | - |
| CDH89_RS27340 () | 74222..74770 | + | 549 | Protein_78 | metallophosphoesterase | - |
| CDH89_RS27345 () | 74767..75030 | + | 264 | Protein_79 | hypothetical protein | - |
| CDH89_RS27350 () | 75054..78041 | - | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CDH89_RS27355 () | 78209..78613 | + | 405 | Protein_81 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CDH89_RS27360 () | 78741..79874 | - | 1134 | WP_001089729.1 | permease | - |
| CDH89_RS27365 () | 79980..80303 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| CDH89_RS27375 () | 80405..81102 | + | 698 | Protein_84 | IS1 family transposase | - |
| CDH89_RS27395 () | 82169..83431 | + | 1263 | WP_069067570.1 | hypothetical protein | - |
| CDH89_RS27400 () | 83504..83830 | + | 327 | Protein_86 | hypothetical protein | - |
| CDH89_RS27405 () | 83847..84544 | - | 698 | Protein_87 | IS1 family transposase | - |
| CDH89_RS27415 () | 84809..85030 | + | 222 | WP_001190711.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CDH89_RS27420 () | 85030..85410 | + | 381 | WP_001216039.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CDH89_RS27425 () | 85415..85594 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| CDH89_RS27430 () | 85622..86665 | + | 1044 | WP_069067567.1 | DUF968 domain-containing protein | - |
| CDH89_RS27440 () | 86968..87279 | + | 312 | WP_001351993.1 | phage antirepressor Ant | - |
| CDH89_RS27445 () | 87312..88163 | - | 852 | WP_000611661.1 | hypothetical protein | - |
| CDH89_RS27450 () | 88274..88483 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| CDH89_RS27465 () | 89088..89309 | + | 222 | WP_000542338.1 | hypothetical protein | - |
| CDH89_RS27470 () | 89317..90348 | + | 1032 | WP_000067537.1 | site-specific integrase | - |
| CDH89_RS27475 () | 90399..90710 | + | 312 | WP_001224232.1 | hypothetical protein | - |
| CDH89_RS27480 () | 90956..91516 | + | 561 | WP_000848370.1 | Ref family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|