MGE detailed information
MGE type: Mobilizable plasmid MGE length: 92385 bp
Accession: NZ_CP021842 Location: 1..92385 Organism: Escherichia coli strain EC974 Replicon: plasmid pEC974-2
Accession: NZ_CP021842 Location: 1..92385 Organism: Escherichia coli strain EC974 Replicon: plasmid pEC974-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH88_RS26865 () | 712..1293 | - | 582 | Protein_1 | IS21 family transposase IS100kyp | Transposase |
| CDH88_RS26870 () | 1304..1680 | - | 377 | Protein_2 | IS1 family transposase | - |
| CDH88_RS26875 () | 1857..2561 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH88_RS26885 () | 2673..3377 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH88_RS26895 () | 3430..3732 | + | 303 | Protein_5 | cysteine hydrolase | - |
| CDH88_RS26900 () | 3870..4754 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CDH88_RS26905 () | 4786..5985 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CDH88_RS26910 () | 6091..6726 | + | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CDH88_RS26915 () | 6758..7000 | - | 243 | WP_000844627.1 | transposase | - |
| CDH88_RS26920 () | 7058..10024 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CDH88_RS26925 () | 10098..10802 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH88_RS26930 () | 10977..11192 | - | 216 | Protein_12 | transposase | - |
| CDH88_RS26945 () | 12936..13091 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| CDH88_RS26950 () | 13285..14396 | - | 1112 | Protein_15 | IS4 family transposase IS421 | Transposase |
| CDH88_RS26955 () | 14556..15065 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| CDH88_RS26960 () | 15077..15658 | - | 582 | WP_000035250.1 | hypothetical protein | - |
| CDH88_RS26965 () | 15694..16509 | - | 816 | WP_072779020.1 | hypothetical protein | - |
| CDH88_RS26970 () | 16519..17790 | - | 1272 | WP_000459149.1 | hypothetical protein | - |
| CDH88_RS26980 () | 19136..19444 | - | 309 | Protein_21 | hypothetical protein | - |
| CDH88_RS26985 () | 19504..21210 | - | 1707 | WP_000067707.1 | hypothetical protein | - |
| CDH88_RS26990 () | 21437..22438 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| CDH88_RS26995 () | 22455..23651 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| CDH88_RS27000 () | 23820..24629 | - | 810 | WP_001154682.1 | GIY-YIG nuclease family protein | - |
| CDH88_RS27005 () | 24922..25806 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| CDH88_RS27010 () | 26142..26534 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| CDH88_RS28360 () | 26544..26684 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| CDH88_RS27015 () | 26710..27132 | - | 423 | WP_000007763.1 | hypothetical protein | - |
| CDH88_RS27020 () | 27172..27958 | - | 787 | Protein_30 | hypothetical protein | - |
| CDH88_RS27025 () | 28133..28830 | + | 698 | Protein_31 | IS1 family transposase | - |
| CDH88_RS27030 () | 28837..29292 | + | 456 | Protein_32 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| CDH88_RS28570 () | 30036..30680 | + | 645 | WP_000973210.1 | hypothetical protein | - |
| CDH88_RS28575 () | 30687..31382 | + | 696 | WP_001135530.1 | maturase | - |
| CDH88_RS27055 () | 31742..32955 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| CDH88_RS27060 () | 32999..33289 | + | 291 | Protein_36 | IS200/IS605 family transposase | - |
| CDH88_RS27070 () | 33756..37229 | + | 3474 | WP_076751476.1 | cellulose biosynthesis protein BcsC | - |
| CDH88_RS27075 () | 37420..38118 | - | 699 | Protein_38 | IS3 family transposase IS2 | Transposase |
| CDH88_RS27080 () | 38237..38971 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| CDH88_RS27085 () | 39080..39777 | + | 698 | Protein_40 | IS1 family transposase | - |
| CDH88_RS27090 () | 39793..40341 | + | 549 | Protein_41 | metallophosphoesterase | - |
| CDH88_RS27095 () | 40338..40601 | + | 264 | Protein_42 | hypothetical protein | - |
| CDH88_RS27100 () | 40625..43612 | - | 2988 | Protein_43 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CDH88_RS27105 () | 43780..44184 | + | 405 | Protein_44 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CDH88_RS27110 () | 44312..45445 | - | 1134 | WP_001089729.1 | permease | - |
| CDH88_RS27115 () | 45551..45874 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| CDH88_RS27125 () | 45976..46672 | + | 697 | Protein_47 | IS1 family transposase | - |
| CDH88_RS27145 () | 47739..49001 | + | 1263 | WP_069067570.1 | hypothetical protein | - |
| CDH88_RS27150 () | 49074..49400 | + | 327 | Protein_49 | hypothetical protein | - |
| CDH88_RS27155 () | 49417..50114 | - | 698 | Protein_50 | IS1 family transposase | - |
| CDH88_RS27165 () | 50379..50600 | + | 222 | WP_001190711.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CDH88_RS27170 () | 50600..50980 | + | 381 | WP_001216039.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CDH88_RS27175 () | 50985..51164 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| CDH88_RS27180 () | 51192..52235 | + | 1044 | WP_069067567.1 | DUF968 domain-containing protein | - |
| CDH88_RS27190 () | 52538..52849 | + | 312 | WP_001351993.1 | phage antirepressor Ant | - |
| CDH88_RS27195 () | 52882..53733 | - | 852 | WP_000611661.1 | hypothetical protein | - |
| CDH88_RS27200 () | 53844..54053 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| CDH88_RS27215 () | 54658..54879 | + | 222 | WP_000542338.1 | hypothetical protein | - |
| CDH88_RS27220 () | 54887..55918 | + | 1032 | WP_000067537.1 | site-specific integrase | - |
| CDH88_RS27225 () | 55969..56280 | + | 312 | WP_001224232.1 | hypothetical protein | - |
| CDH88_RS27230 () | 56526..57086 | + | 561 | WP_000848370.1 | Ref family protein | - |
| CDH88_RS27235 () | 57173..57922 | + | 750 | WP_000207077.1 | DUF4145 domain-containing protein | - |
| CDH88_RS27240 () | 58078..58719 | + | 642 | WP_001351995.1 | hypothetical protein | - |
| CDH88_RS27245 () | 58822..59949 | + | 1128 | WP_071447930.1 | RelA/SpoT domain-containing protein | - |
| CDH88_RS27250 () | 59986..60234 | - | 249 | WP_000747845.1 | hypothetical protein | - |
| CDH88_RS27255 () | 60231..60671 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| CDH88_RS27260 () | 60791..61953 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| CDH88_RS27265 () | 62001..62405 | + | 405 | Protein_68 | IS1-like element IS1B family transposase | - |
| CDH88_RS27270 () | 62422..63294 | + | 873 | Protein_69 | IS3 family transposase ISEc31 | Transposase |
| CDH88_RS27275 () | 63296..64006 | + | 711 | Protein_70 | IS3 family transposase ISKpn38 | Transposase |
| CDH88_RS27280 () | 64068..64313 | + | 246 | Protein_71 | IS91 family transposase | - |
| CDH88_RS27285 () | 64897..68412 | + | 3516 | WP_072778934.1 | Outer membrane protein IcsA autotransporter | VF |
| CDH88_RS27290 () | 68587..68792 | - | 206 | Protein_73 | transposase | - |
| CDH88_RS27295 () | 68782..68982 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| CDH88_RS27300 () | 69272..69559 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDH88_RS27305 () | 69556..69807 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CDH88_RS27315 () | 70420..73278 | + | 2859 | WP_076751473.1 | helicase | - |
| CDH88_RS27320 () | 73289..73986 | - | 698 | Protein_78 | IS1 family transposase | - |
| CDH88_RS27330 () | 74150..75901 | - | 1752 | Protein_79 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CDH88_RS27340 () | 76066..76770 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH88_RS27350 () | 76882..77586 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH88_RS28370 () | 77637..77828 | - | 192 | Protein_82 | dihydropteroate synthase | - |
| CDH88_RS27360 () | 77822..78169 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CDH88_RS27365 () | 78333..79124 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CDH88_RS28375 () | 79130..79420 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| CDH88_RS27370 () | 79532..80029 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| CDH88_RS27375 () | 80177..81190 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CDH88_RS28580 () | 81393..81698 | + | 306 | WP_198320071.1 | DUF3330 domain-containing protein | - |
| CDH88_RS27385 () | 81710..82414 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CDH88_RS27395 () | 82548..83265 | - | 718 | Protein_90 | hypothetical protein | - |
| CDH88_RS27405 () | 83262..83748 | - | 487 | Protein_91 | plasmid transfer protein | - |
| CDH88_RS27410 () | 84500..85298 | + | 799 | Protein_92 | trhR | - |
| CDH88_RS27415 () | 85301..85812 | + | 512 | Protein_93 | hypothetical protein | - |
| CDH88_RS27420 () | 86424..87472 | + | 1049 | Protein_94 | thioredoxin family protein | - |
| CDH88_RS27425 () | 87462..87893 | + | 432 | Protein_95 | IncHI-type conjugal transfer protein TrhH | - |
| CDH88_RS27430 () | 87908..88375 | - | 468 | Protein_96 | IS3 family transposase | - |
| CDH88_RS27435 () | 88456..89964 | - | 1509 | WP_001352025.1 | group II intron reverse transcriptase/maturase | - |
| CDH88_RS27450 () | 90637..91062 | - | 426 | Protein_98 | IS3 family transposase | - |
| CDH88_RS27460 () | 91127..92279 | + | 1153 | Protein_99 | IS30 family transposase IS30D | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|