MGE detailed information
MGE type: Genomic_island MGE length: 24818 bp
Accession: NZ_CP021840 Location: 1116730..1141547 Organism: Escherichia coli strain EC974 Replicon: chromosome
Accession: NZ_CP021840 Location: 1116730..1141547 Organism: Escherichia coli strain EC974 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH88_RS05790 () | 1112783..1113727 | + | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| CDH88_RS05795 () | 1113724..1114557 | + | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| CDH88_RS05800 () | 1114557..1115321 | + | 765 | WP_088172237.1 | nickel import ATP-binding protein NikD | - |
| CDH88_RS05805 () | 1115318..1116124 | + | 807 | WP_032288306.1 | nickel import ATP-binding protein NikE | - |
| CDH88_RS05810 () | 1116130..1116531 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| CDH88_RS05815 () | 1116730..1117476 | + | 747 | WP_001308115.1 | GntR family transcriptional regulator | - |
| CDH88_RS05820 () | 1117501..1117974 | + | 474 | WP_047669097.1 | PTS sugar transporter subunit IIA | - |
| CDH88_RS05825 () | 1117971..1118252 | + | 282 | WP_000084022.1 | PTS sugar transporter subunit IIB | - |
| CDH88_RS05830 () | 1118329..1119687 | + | 1359 | WP_001302220.1 | PTS galactitol transporter subunit IIC | - |
| CDH88_RS05835 () | 1119680..1121188 | + | 1509 | WP_088172238.1 | carbohydrate kinase | - |
| CDH88_RS05840 () | 1121178..1121447 | + | 270 | WP_000933060.1 | HPr family phosphocarrier protein | - |
| CDH88_RS05845 () | 1121479..1122339 | + | 861 | WP_001131788.1 | class II aldolase | - |
| CDH88_RS05850 () | 1122389..1122748 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CDH88_RS05855 () | 1122745..1123020 | - | 276 | WP_088172239.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CDH88_RS05860 () | 1123093..1124217 | - | 1125 | WP_001314210.1 | ABC transporter permease | - |
| CDH88_RS05865 () | 1124217..1126952 | - | 2736 | WP_000149132.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CDH88_RS05870 () | 1126949..1128016 | - | 1068 | WP_000361517.1 | HlyD family secretion protein | - |
| CDH88_RS28630 () | 1128079..1128192 | - | 114 | WP_212736213.1 | hypothetical protein | - |
| CDH88_RS05875 () | 1128382..1130004 | - | 1623 | WP_088172240.1 | DUF4049 domain-containing protein | - |
| CDH88_RS05880 () | 1130266..1131876 | - | 1611 | WP_088172241.1 | DUF4049 domain-containing protein | - |
| CDH88_RS05885 () | 1132259..1133311 | + | 1053 | WP_033815652.1 | DUF2776 domain-containing protein | - |
| CDH88_RS05890 () | 1133973..1134407 | - | 435 | WP_000723069.1 | copper resistance system metallochaperone PcoE | - |
| CDH88_RS28435 () | 1134625..1134768 | - | 144 | Protein_1090 | two-component sensor histidine kinase | - |
| CDH88_RS05900 () | 1134854..1135279 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CDH88_RS05905 () | 1135276..1135626 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| CDH88_RS05910 () | 1135657..1137270 | + | 1614 | WP_000080193.1 | IS66 family transposase ISEc23 | Transposase |
| CDH88_RS05915 () | 1137297..1138565 | - | 1269 | WP_088172242.1 | copper resistance membrane spanning protein PcoS | - |
| CDH88_RS05920 () | 1138562..1139242 | - | 681 | WP_001188930.1 | Regulator of RpoS | VF |
| CDH88_RS05925 () | 1139297..1140226 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| CDH88_RS05930 () | 1140231..1140611 | - | 381 | WP_020219105.1 | copper resistance system metallochaperone PcoC | - |
| CDH88_RS05935 () | 1140651..1141541 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| CDH88_RS05940 () | 1141547..1143364 | - | 1818 | WP_000925240.1 | multicopper oxidase PcoA | - |
| CDH88_RS05945 () | 1143599..1144048 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| CDH88_RS05950 () | 1144337..1145074 | + | 738 | WP_000287501.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| CDH88_RS05955 () | 1145108..1145305 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|