MGE detailed information
MGE type: Prophage MGE length: 85370 bp
Accession: NZ_CP021825 Location: 1331494..1416863 Organism: Sinorhizobium meliloti strain KH35c Replicon: chromosome
Accession: NZ_CP021825 Location: 1331494..1416863 Organism: Sinorhizobium meliloti strain KH35c Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO23_RS06365 () | 1327656..1328099 | + | 444 | WP_003529999.1 | TIGR02594 family protein | - |
| CDO23_RS06370 () | 1328250..1329356 | + | 1107 | WP_003530001.1 | endonuclease | - |
| CDO23_RS06375 () | 1329359..1330108 | + | 750 | WP_027989370.1 | NUDIX hydrolase | - |
| CDO23_RS06380 () | 1330285..1331202 | + | 918 | WP_003530005.1 | PhzF family phenazine biosynthesis protein | - |
| CDO23_RS06390 () | 1331494..1332678 | - | 1185 | WP_041169328.1 | hypothetical protein | - |
| CDO23_RS06395 () | 1332665..1332898 | - | 234 | WP_017277269.1 | hypothetical protein | - |
| CDO23_RS06400 () | 1332946..1333137 | - | 192 | WP_088217662.1 | hypothetical protein | - |
| CDO23_RS06405 () | 1333134..1333610 | - | 477 | WP_088217858.1 | DUF1643 domain-containing protein | - |
| CDO23_RS06410 () | 1333867..1334241 | - | 375 | WP_088217663.1 | HNH endonuclease | - |
| CDO23_RS06415 () | 1334238..1334603 | - | 366 | WP_088217664.1 | hypothetical protein | - |
| CDO23_RS06420 () | 1334600..1335280 | - | 681 | WP_088217665.1 | hypothetical protein | - |
| CDO23_RS06425 () | 1335277..1335741 | - | 465 | WP_088217666.1 | hypothetical protein | - |
| CDO23_RS06430 () | 1335738..1335956 | - | 219 | WP_088217667.1 | hypothetical protein | - |
| CDO23_RS06435 () | 1335953..1336375 | - | 423 | WP_088217668.1 | hypothetical protein | - |
| CDO23_RS06440 () | 1336372..1336803 | - | 432 | WP_088217669.1 | hypothetical protein | - |
| CDO23_RS06445 () | 1336806..1337468 | - | 663 | WP_088217670.1 | YqaJ viral recombinase family protein | - |
| CDO23_RS06450 () | 1337461..1338279 | - | 819 | WP_088217671.1 | ERF family protein | - |
| CDO23_RS06455 () | 1338291..1339319 | - | 1029 | WP_088217672.1 | hypothetical protein | - |
| CDO23_RS06460 () | 1339321..1339536 | - | 216 | WP_017271904.1 | hypothetical protein | - |
| CDO23_RS06465 () | 1339533..1339754 | - | 222 | WP_017267216.1 | hypothetical protein | - |
| CDO23_RS06470 () | 1339751..1339984 | - | 234 | WP_088217673.1 | hypothetical protein | - |
| CDO23_RS06475 () | 1340442..1340801 | + | 360 | WP_088217674.1 | hypothetical protein | - |
| CDO23_RS06480 () | 1340791..1341471 | - | 681 | WP_088217675.1 | S24 family peptidase | - |
| CDO23_RS06485 () | 1341558..1341755 | + | 198 | WP_127666715.1 | hypothetical protein | - |
| CDO23_RS06490 () | 1341764..1342012 | - | 249 | WP_088217677.1 | hypothetical protein | - |
| CDO23_RS06495 () | 1342099..1342386 | + | 288 | WP_088217678.1 | hypothetical protein | - |
| CDO23_RS06500 () | 1342387..1343190 | + | 804 | WP_088217679.1 | DUF2312 domain-containing protein | - |
| CDO23_RS06510 () | 1343769..1344146 | + | 378 | WP_088217681.1 | hypothetical protein | - |
| CDO23_RS06515 () | 1344143..1344346 | + | 204 | WP_088217682.1 | hypothetical protein | - |
| CDO23_RS06520 () | 1344343..1345725 | + | 1383 | WP_088217683.1 | DUF4942 domain-containing protein | - |
| CDO23_RS06525 () | 1345722..1346291 | + | 570 | WP_088217684.1 | hypothetical protein | - |
| CDO23_RS06530 () | 1346288..1346641 | + | 354 | WP_088217685.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CDO23_RS06535 () | 1346770..1347012 | - | 243 | WP_017276977.1 | DUF378 domain-containing protein | - |
| CDO23_RS06540 () | 1347495..1347890 | + | 396 | WP_038439144.1 | hypothetical protein | - |
| CDO23_RS06545 () | 1347832..1348608 | + | 777 | WP_088217686.1 | hypothetical protein | - |
| CDO23_RS06550 () | 1348605..1349033 | + | 429 | WP_088217687.1 | GcrA cell cycle regulator | - |
| CDO23_RS06555 () | 1349030..1349647 | + | 618 | WP_088217688.1 | hypothetical protein | - |
| CDO23_RS06560 () | 1350066..1350380 | + | 315 | WP_088217689.1 | EthD family reductase | - |
| CDO23_RS06565 () | 1350531..1351349 | - | 819 | WP_088217690.1 | hypothetical protein | - |
| CDO23_RS33740 () | 1351491..1352093 | - | 603 | WP_153517963.1 | hypothetical protein | - |
| CDO23_RS33505 () | 1352162..1352782 | + | 621 | WP_094123228.1 | hypothetical protein | - |
| CDO23_RS06590 () | 1353024..1353488 | + | 465 | WP_088217693.1 | DUF2280 domain-containing protein | - |
| CDO23_RS06595 () | 1353475..1354872 | + | 1398 | WP_088217694.1 | phage terminase large subunit | - |
| CDO23_RS06600 () | 1354881..1356260 | + | 1380 | WP_088217695.1 | DUF1073 domain-containing protein | - |
| CDO23_RS33745 () | 1356250..1357281 | - | 1032 | WP_153517962.1 | hypothetical protein | - |
| CDO23_RS06610 () | 1357350..1358495 | + | 1146 | WP_088217697.1 | DUF2213 domain-containing protein | - |
| CDO23_RS06615 () | 1358508..1358990 | + | 483 | WP_088217698.1 | hypothetical protein | - |
| CDO23_RS06620 () | 1359011..1359979 | + | 969 | WP_088195469.1 | DUF2184 domain-containing protein | - |
| CDO23_RS06625 () | 1359994..1360335 | + | 342 | WP_088217699.1 | hypothetical protein | - |
| CDO23_RS06630 () | 1360387..1360881 | + | 495 | WP_088217700.1 | hypothetical protein | - |
| CDO23_RS06635 () | 1360881..1361246 | + | 366 | WP_088217701.1 | hypothetical protein | - |
| CDO23_RS06645 () | 1361599..1361811 | + | 213 | WP_088217703.1 | hypothetical protein | - |
| CDO23_RS06650 () | 1361811..1362848 | + | 1038 | WP_088217704.1 | head morphogenesis protein | - |
| CDO23_RS06655 () | 1362848..1363294 | + | 447 | WP_088217705.1 | hypothetical protein | - |
| CDO23_RS06660 () | 1363272..1363508 | - | 237 | WP_088217706.1 | hypothetical protein | - |
| CDO23_RS06665 () | 1363495..1363911 | + | 417 | WP_088217707.1 | hypothetical protein | - |
| CDO23_RS06670 () | 1363927..1364415 | + | 489 | WP_088217708.1 | hypothetical protein | - |
| CDO23_RS06675 () | 1364424..1364798 | + | 375 | WP_088217709.1 | hypothetical protein | - |
| CDO23_RS33750 () | 1364867..1365187 | + | 321 | WP_153517961.1 | hypothetical protein | - |
| CDO23_RS06680 () | 1365199..1367175 | + | 1977 | WP_153517960.1 | phage tail length tape measure family protein | - |
| CDO23_RS06685 () | 1367179..1367913 | + | 735 | WP_088217711.1 | hypothetical protein | - |
| CDO23_RS06690 () | 1367913..1368512 | + | 600 | WP_088217712.1 | hypothetical protein | - |
| CDO23_RS06695 () | 1368521..1368940 | + | 420 | WP_088217713.1 | hypothetical protein | - |
| CDO23_RS06700 () | 1368937..1371534 | + | 2598 | WP_088217714.1 | hypothetical protein | - |
| CDO23_RS06705 () | 1371603..1373375 | + | 1773 | WP_088217715.1 | SGNH/GDSL hydrolase family protein | - |
| CDO23_RS06710 () | 1373404..1374162 | + | 759 | WP_088217716.1 | hypothetical protein | - |
| CDO23_RS06715 () | 1374178..1374363 | - | 186 | WP_088217717.1 | hypothetical protein | - |
| CDO23_RS06720 () | 1374408..1375247 | - | 840 | WP_088217718.1 | FkbM family methyltransferase | - |
| CDO23_RS06725 () | 1375505..1376776 | + | 1272 | WP_088217859.1 | protease | - |
| CDO23_RS06730 () | 1377117..1378085 | + | 969 | WP_088217719.1 | chitinase | - |
| CDO23_RS06735 () | 1378085..1378402 | + | 318 | WP_088217720.1 | ammonia monooxygenase | - |
| CDO23_RS06740 () | 1378402..1378686 | + | 285 | WP_088217721.1 | hypothetical protein | - |
| CDO23_RS06750 () | 1378870..1379316 | + | 447 | WP_088217723.1 | hypothetical protein | - |
| CDO23_RS06755 () | 1379396..1381000 | - | 1605 | WP_192923658.1 | calcium-binding protein | - |
| CDO23_RS06760 () | 1381209..1381598 | + | 390 | WP_088217725.1 | helix-turn-helix domain-containing protein | - |
| CDO23_RS06765 () | 1381749..1382117 | - | 369 | WP_088217726.1 | hypothetical protein | - |
| CDO23_RS34175 () | 1382110..1382280 | - | 171 | WP_088217860.1 | hypothetical protein | - |
| CDO23_RS06775 () | 1382373..1383347 | + | 975 | WP_088217727.1 | non-homologous end-joining DNA ligase | - |
| CDO23_RS06780 () | 1383363..1384274 | - | 912 | WP_088217728.1 | hypothetical protein | - |
| CDO23_RS06785 () | 1384724..1385161 | - | 438 | WP_003530007.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CDO23_RS06790 () | 1385166..1385354 | - | 189 | WP_028011798.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CDO23_RS06795 () | 1385531..1386301 | + | 771 | WP_028011797.1 | LpsS | - |
| CDO23_RS06800 () | 1386752..1387723 | + | 972 | WP_028011858.1 | glycosyltransferase family 2 protein | - |
| CDO23_RS06805 () | 1387748..1389058 | - | 1311 | WP_028011859.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| CDO23_RS06810 () | 1389045..1390898 | - | 1854 | WP_028011860.1 | type I secretion system permease/ATPase | - |
| CDO23_RS06815 () | 1390920..1391732 | - | 813 | WP_028011861.1 | hypothetical protein | - |
| CDO23_RS06820 () | 1392107..1394764 | - | 2658 | WP_028011862.1 | TonB-dependent receptor | - |
| CDO23_RS06825 () | 1394880..1395941 | - | 1062 | WP_028011863.1 | FecR family protein | - |
| CDO23_RS06830 () | 1395931..1396443 | - | 513 | WP_028011864.1 | sigma-70 family RNA polymerase sigma factor | - |
| CDO23_RS06835 () | 1396755..1397768 | + | 1014 | WP_094123229.1 | Tim44 domain-containing protein | - |
| CDO23_RS06840 () | 1397993..1398718 | + | 726 | WP_003530025.1 | pentapeptide repeat-containing protein | - |
| CDO23_RS06845 () | 1398734..1399021 | - | 288 | WP_028011865.1 | hypothetical protein | - |
| CDO23_RS06850 () | 1399018..1399347 | - | 330 | WP_003530030.1 | hypothetical protein | - |
| CDO23_RS06855 () | 1399533..1400222 | - | 690 | WP_028011866.1 | helix-turn-helix transcriptional regulator | - |
| CDO23_RS06860 () | 1400357..1400875 | + | 519 | WP_028011867.1 | chromosomal replication initiator protein DnaA | - |
| CDO23_RS06865 () | 1401017..1401634 | + | 618 | WP_028011868.1 | hypothetical protein | - |
| CDO23_RS06870 () | 1401851..1402216 | + | 366 | WP_027989360.1 | BA14K family protein | - |
| CDO23_RS06875 () | 1402248..1402427 | - | 180 | WP_003530036.1 | hypothetical protein | - |
| CDO23_RS06880 () | 1402569..1402766 | - | 198 | WP_027989359.1 | hypothetical protein | - |
| CDO23_RS06895 () | 1404141..1404581 | - | 441 | WP_028011870.1 | hypothetical protein | - |
| CDO23_RS06900 () | 1404757..1405119 | + | 363 | WP_028011871.1 | hypothetical protein | - |
| CDO23_RS06905 () | 1405321..1405725 | - | 405 | WP_010969643.1 | hypothetical protein | - |
| CDO23_RS06910 () | 1406064..1406219 | + | 156 | WP_010969642.1 | DUF3309 domain-containing protein | - |
| CDO23_RS06915 () | 1406245..1406586 | - | 342 | WP_003530046.1 | GFA family protein | - |
| CDO23_RS06920 () | 1406726..1408159 | + | 1434 | WP_028011872.1 | terminase large subunit | - |
| CDO23_RS06925 () | 1408341..1409006 | + | 666 | WP_033052287.1 | hypothetical protein | - |
| CDO23_RS06930 () | 1409008..1409400 | + | 393 | WP_028011874.1 | hypothetical protein | - |
| CDO23_RS06935 () | 1409674..1410459 | + | 786 | Protein_1325 | phage portal protein | - |
| CDO23_RS06940 () | 1410456..1411118 | + | 663 | WP_033052288.1 | hypothetical protein | - |
| CDO23_RS06945 () | 1411313..1411708 | + | 396 | WP_027989352.1 | hypothetical protein | - |
| CDO23_RS06950 () | 1411920..1412825 | + | 906 | Protein_1328 | hypothetical protein | - |
| CDO23_RS06955 () | 1412897..1413892 | + | 996 | WP_027989343.1 | DUF5309 domain-containing protein | - |
| CDO23_RS06960 () | 1414037..1414402 | + | 366 | WP_050592617.1 | hypothetical protein | - |
| CDO23_RS06965 () | 1414954..1415274 | + | 321 | WP_028011877.1 | hypothetical protein | - |
| CDO23_RS06970 () | 1415271..1415633 | + | 363 | WP_050592618.1 | hypothetical protein | - |
| CDO23_RS06975 () | 1416051..1416878 | - | 828 | WP_028011878.1 | NAD(P)-dependent oxidoreductase | - |
| CDO23_RS06980 () | 1416901..1417743 | - | 843 | WP_028011879.1 | glycosyltransferase | - |
| CDO23_RS06985 () | 1417965..1419026 | - | 1062 | WP_088217729.1 | glycosyltransferase family 2 protein | - |
| CDO23_RS33755 () | 1419334..1419636 | - | 303 | WP_153324215.1 | hypothetical protein | - |
| CDO23_RS06995 () | 1419885..1420697 | + | 813 | WP_028011881.1 | membrane protein | - |
| CDO23_RS07000 () | 1420818..1421069 | + | 252 | WP_028011882.1 | hypothetical protein | - |
| CDO23_RS07005 () | 1421062..1421400 | + | 339 | WP_028011883.1 | DUF1515 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|