MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 127177 bp
Accession: NZ_CP021817 Location: 1..127177 Organism: Sinorhizobium meliloti strain M270 Replicon: plasmid accessoryC
Accession: NZ_CP021817 Location: 1..127177 Organism: Sinorhizobium meliloti strain M270 Replicon: plasmid accessoryC
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO26_RS36680 (CDO26_36680) | 704..1759 | - | 1056 | WP_088199150.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| CDO26_RS36685 (CDO26_36685) | 1845..2747 | - | 903 | WP_088199151.1 | hypothetical protein | - |
| CDO26_RS36690 (CDO26_36690) | 2744..4294 | - | 1551 | WP_088199152.1 | hypothetical protein | - |
| CDO26_RS36695 (CDO26_36695) | 4385..5392 | - | 1008 | WP_207953792.1 | polyprenyl synthetase family protein | - |
| CDO26_RS36700 (CDO26_36700) | 5523..6860 | - | 1338 | WP_088199216.1 | cytochrome P450 | - |
| CDO26_RS36705 (CDO26_36705) | 6875..7720 | - | 846 | WP_088199153.1 | putative oxidoreductase | VF |
| CDO26_RS36710 (CDO26_36710) | 7707..9308 | - | 1602 | WP_088199154.1 | cytochrome P450 | - |
| CDO26_RS36715 (CDO26_36715) | 9403..10605 | - | 1203 | WP_088199155.1 | cytochrome P450 | - |
| CDO26_RS38705 | 11139..11304 | + | 166 | Protein_9 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| CDO26_RS36720 (CDO26_36720) | 12273..12721 | - | 449 | Protein_10 | MucR family transcriptional regulator | - |
| CDO26_RS36725 (CDO26_36725) | 13394..13664 | + | 271 | Protein_11 | cytochrome | - |
| CDO26_RS36730 (CDO26_36730) | 13803..14891 | + | 1089 | WP_088198005.1 | IS630 family transposase ISBj5 | Transposase |
| CDO26_RS36735 (CDO26_36735) | 15482..16504 | + | 1023 | WP_088199156.1 | LacI family DNA-binding transcriptional regulator | - |
| CDO26_RS38710 | 16690..16906 | + | 217 | Protein_14 | IS630 family transposase ISMex41 | Transposase |
| CDO26_RS36745 (CDO26_36745) | 17095..17359 | + | 265 | Protein_15 | hypothetical protein | - |
| CDO26_RS40645 | 17441..17695 | + | 255 | WP_280641142.1 | hypothetical protein | - |
| CDO26_RS36755 (CDO26_36755) | 17926..18976 | + | 1051 | Protein_17 | group II intron reverse transcriptase/maturase | - |
| CDO26_RS36765 (CDO26_36765) | 19025..20228 | + | 1204 | Protein_18 | IS256 family transposase ISRm3G | Transposase |
| CDO26_RS40650 | 20908..21072 | - | 165 | WP_280641148.1 | hypothetical protein | - |
| CDO26_RS36780 (CDO26_36780) | 21250..22275 | + | 1026 | Protein_20 | tyrosine-type recombinase/integrase | - |
| CDO26_RS36785 (CDO26_36785) | 22423..22671 | + | 249 | WP_088199159.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| CDO26_RS36790 (CDO26_36790) | 22668..23054 | + | 387 | WP_088199160.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CDO26_RS36795 (CDO26_36795) | 23057..23372 | + | 316 | Protein_23 | integrase | - |
| CDO26_RS36800 (CDO26_36800) | 23415..24337 | - | 923 | Protein_24 | IS5 family transposase ISHph1 | Transposase |
| CDO26_RS36805 (CDO26_36805) | 24468..25829 | - | 1362 | Protein_25 | conjugal transfer protein TrbE | - |
| CDO26_RS36810 (CDO26_36810) | 25838..26136 | - | 299 | Protein_26 | conjugal transfer protein TrbD | - |
| CDO26_RS36815 (CDO26_36815) | 26129..26533 | - | 405 | WP_088199161.1 | conjugal transfer pilin TrbC | - |
| CDO26_RS36820 (CDO26_36820) | 26523..27488 | - | 966 | WP_088199162.1 | Type IV secretion system protein VirB11 | VF |
| CDO26_RS36825 (CDO26_36825) | 27485..28115 | - | 631 | Protein_29 | Acyl-homoserine-lactone synthase | VF |
| CDO26_RS36830 (CDO26_36830) | 28514..29689 | + | 1176 | WP_088199218.1 | Sporulation initiation inhibitor protein Soj | VF |
| CDO26_RS36835 (CDO26_36835) | 29747..30757 | + | 1011 | WP_234843352.1 | plasmid partitioning protein RepB | - |
| CDO26_RS36840 (CDO26_36840) | 30925..32244 | + | 1320 | WP_088199163.1 | plasmid replication protein RepC | - |
| CDO26_RS36845 (CDO26_36845) | 32347..32728 | - | 382 | Protein_33 | recombinase family protein | - |
| CDO26_RS36850 (CDO26_36850) | 33393..34505 | - | 1113 | WP_088199164.1 | site-specific integrase | - |
| CDO26_RS36855 (CDO26_36855) | 34631..35584 | + | 954 | WP_088199165.1 | DUF1403 family protein | - |
| CDO26_RS36860 (CDO26_36860) | 35704..36279 | + | 576 | WP_234896265.1 | SMC-Scp complex subunit ScpB | - |
| CDO26_RS36870 (CDO26_36870) | 36337..37631 | - | 1295 | Protein_37 | DEAD/DEAH box helicase family protein | - |
| CDO26_RS36875 (CDO26_36875) | 37745..38440 | - | 696 | WP_088199221.1 | GntR family transcriptional regulator | - |
| CDO26_RS36880 (CDO26_36880) | 39605..40348 | + | 744 | WP_088199167.1 | IclR family transcriptional regulator | - |
| CDO26_RS36885 (CDO26_36885) | 40447..40905 | - | 459 | Protein_40 | IS256 family transposase ISRhru4 | Transposase |
| CDO26_RS36890 (CDO26_36890) | 40937..42335 | - | 1399 | Protein_41 | IS1182 family transposase ISMno17 | Transposase |
| CDO26_RS36900 (CDO26_36900) | 42519..43720 | + | 1202 | Protein_42 | IS256 family transposase ISRm3G | Transposase |
| CDO26_RS36905 (CDO26_36905) | 43756..44454 | - | 699 | Protein_43 | IS256 family transposase | - |
| CDO26_RS40655 | 45105..45884 | + | 780 | WP_280641144.1 | reverse transcriptase domain-containing protein | - |
| CDO26_RS40660 | 45814..46413 | + | 600 | WP_280641145.1 | reverse transcriptase domain-containing protein | - |
| CDO26_RS40665 | 46308..46685 | - | 378 | Protein_46 | IS3 family transposase | - |
| CDO26_RS36925 (CDO26_36925) | 46780..47055 | + | 276 | WP_088199169.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CDO26_RS36930 (CDO26_36930) | 47052..47386 | + | 335 | Protein_48 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CDO26_RS36940 (CDO26_36940) | 47797..48114 | + | 318 | Protein_49 | DNA-binding transcriptional regulator | - |
| CDO26_RS36945 (CDO26_36945) | 48232..48726 | - | 495 | WP_088199171.1 | C-factor | VF |
| CDO26_RS36950 (CDO26_36950) | 49035..49293 | - | 259 | Protein_51 | hypothetical protein | - |
| CDO26_RS36960 (CDO26_36960) | 49297..50926 | - | 1630 | Protein_52 | type IV secretory system conjugative DNA transfer family protein | - |
| CDO26_RS36965 (CDO26_36965) | 50923..51222 | - | 300 | WP_088199172.1 | mobilization protein | - |
| CDO26_RS40670 | 51276..51465 | - | 190 | Protein_54 | OST-HTH/LOTUS domain-containing protein | - |
| CDO26_RS40675 | 51799..52029 | + | 231 | WP_207953843.1 | hypothetical protein | - |
| CDO26_RS36975 (CDO26_36975) | 52203..55847 | + | 3645 | WP_088199173.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| CDO26_RS36980 (CDO26_36980) | 55857..56630 | + | 774 | WP_088199174.1 | DUF6118 family protein | - |
| CDO26_RS36985 (CDO26_36985) | 56872..57123 | - | 252 | WP_280641147.1 | hypothetical protein | - |
| CDO26_RS36990 (CDO26_36990) | 57400..58482 | + | 1083 | WP_167693621.1 | class I SAM-dependent methyltransferase | - |
| CDO26_RS36995 (CDO26_36995) | 59268..59996 | + | 729 | WP_088199176.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| CDO26_RS37000 (CDO26_37000) | 60525..61289 | - | 765 | WP_088199177.1 | Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL | VF |
| CDO26_RS37005 (CDO26_37005) | 61334..62539 | - | 1206 | WP_234896335.1 | phosphonate metabolism protein PhnM | - |
| CDO26_RS37010 (CDO26_37010) | 62539..63339 | - | 801 | WP_088199178.1 | Putative phosphonates utilization ATP-binding protein PhnK | VF |
| CDO26_RS37015 (CDO26_37015) | 63336..64277 | - | 942 | WP_088199179.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| CDO26_RS37020 (CDO26_37020) | 64274..65377 | - | 1104 | WP_088199180.1 | carbon-phosphorus lyase complex subunit PhnI | - |
| CDO26_RS37025 (CDO26_37025) | 65378..65983 | - | 606 | WP_088199181.1 | phosphonate C-P lyase system protein PhnH | - |
| CDO26_RS37030 (CDO26_37030) | 65980..66402 | - | 423 | WP_088199182.1 | phosphonate C-P lyase system protein PhnG | - |
| CDO26_RS37035 (CDO26_37035) | 66561..67262 | - | 702 | WP_088199183.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| CDO26_RS37040 (CDO26_37040) | 67323..68564 | - | 1242 | WP_088199184.1 | alkaline phosphatase family protein | - |
| CDO26_RS37045 (CDO26_37045) | 68590..69618 | - | 1029 | WP_088199185.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| CDO26_RS37050 (CDO26_37050) | 69615..70631 | - | 1017 | WP_088199186.1 | Dipeptide transport ATP-binding protein DppD | VF |
| CDO26_RS37055 (CDO26_37055) | 70666..72180 | - | 1515 | WP_153491752.1 | ABC transporter substrate-binding protein | - |
| CDO26_RS37060 (CDO26_37060) | 72245..73144 | - | 900 | WP_234896334.1 | ABC transporter permease | - |
| CDO26_RS37065 (CDO26_37065) | 73147..74058 | - | 912 | WP_088199188.1 | ABC transporter permease | - |
| CDO26_RS37070 (CDO26_37070) | 75176..76351 | + | 1176 | WP_088199189.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| CDO26_RS37075 (CDO26_37075) | 76404..78014 | - | 1611 | WP_088199190.1 | asparagine synthase-related protein | - |
| CDO26_RS37080 (CDO26_37080) | 78326..78940 | - | 615 | WP_088199191.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| CDO26_RS37085 (CDO26_37085) | 79534..80532 | + | 999 | WP_088199192.1 | phosphoenolpyruvate mutase | - |
| CDO26_RS37090 (CDO26_37090) | 80589..81830 | + | 1242 | WP_088199193.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CDO26_RS37095 (CDO26_37095) | 81827..82606 | + | 780 | WP_088199194.1 | N-acetylmuramate alpha-1-phosphate uridylyltransferase | VF |
| CDO26_RS37100 (CDO26_37100) | 82630..82917 | + | 288 | WP_088199195.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| CDO26_RS37105 (CDO26_37105) | 83288..84364 | + | 1077 | WP_088199196.1 | DUF418 domain-containing protein | - |
| CDO26_RS37115 (CDO26_37115) | 84781..85367 | + | 587 | Protein_83 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| CDO26_RS40680 | 86078..86785 | - | 708 | WP_280641138.1 | hypothetical protein | - |
| CDO26_RS37135 (CDO26_37135) | 86969..87520 | - | 552 | WP_088199199.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| CDO26_RS40685 | 87635..88546 | - | 912 | WP_234896434.1 | hypothetical protein | - |
| CDO26_RS40690 | 88524..89054 | - | 531 | WP_234896435.1 | hypothetical protein | - |
| CDO26_RS37145 (CDO26_37145) | 89216..90455 | - | 1240 | Protein_88 | transposase | - |
| CDO26_RS37150 (CDO26_37150) | 90613..91446 | + | 834 | Protein_89 | IS5 family transposase ISRm4-1 | Transposase |
| CDO26_RS37160 (CDO26_37160) | 92305..93003 | - | 699 | WP_088199200.1 | GntR family transcriptional regulator | - |
| CDO26_RS37165 (CDO26_37165) | 93147..93353 | - | 207 | WP_134952563.1 | hypothetical protein | - |
| CDO26_RS37170 (CDO26_37170) | 93519..94541 | + | 1023 | WP_088199156.1 | LacI family DNA-binding transcriptional regulator | - |
| CDO26_RS37175 (CDO26_37175) | 94912..96070 | + | 1159 | Protein_93 | IS110 family transposase ISRel9 | Transposase |
| CDO26_RS37185 (CDO26_37185) | 96376..97314 | + | 939 | Protein_94 | IS701 family transposase ISMmg4 | Transposase |
| CDO26_RS37190 (CDO26_37195) | 98095..99426 | + | 1332 | WP_280641139.1 | pitrilysin family protein | - |
| CDO26_RS37195 (CDO26_37200) | 99446..100729 | + | 1284 | WP_088199202.1 | pitrilysin family protein | - |
| CDO26_RS37200 (CDO26_37205) | 100902..101111 | + | 210 | WP_088199203.1 | hypothetical protein | - |
| CDO26_RS37210 (CDO26_37215) | 101538..102888 | + | 1351 | Protein_98 | IS5 family transposase ISRm12 | Transposase |
| CDO26_RS37215 (CDO26_37220) | 103054..103488 | + | 435 | Protein_99 | IS5-like element ISRm33 family transposase | - |
| CDO26_RS37220 (CDO26_37225) | 103578..104087 | + | 510 | Protein_100 | IS21 family transposase ISAzs30 | Transposase |
| CDO26_RS37225 (CDO26_37230) | 104118..105320 | - | 1203 | WP_010967204.1 | IS256 family transposase ISRm3 | Transposase |
| CDO26_RS37235 (CDO26_37240) | 105380..106146 | + | 767 | Protein_102 | IS21 family transposase ISMtsp8 | Transposase |
| CDO26_RS37240 (CDO26_37245) | 106143..107024 | + | 882 | WP_088199205.1 | IS21 family transposase ISRel3 | Transposase |
| CDO26_RS37245 (CDO26_37250) | 107608..108810 | + | 1203 | WP_088199206.1 | cytochrome P450 | - |
| CDO26_RS37250 (CDO26_37255) | 108909..109199 | + | 291 | Protein_105 | cytochrome P450 | - |
| CDO26_RS37260 (CDO26_37265) | 109457..110284 | - | 828 | WP_088199208.1 | carbohydrate ABC transporter permease | - |
| CDO26_RS37265 (CDO26_37270) | 110284..111243 | - | 960 | WP_234896350.1 | sugar ABC transporter permease | - |
| CDO26_RS37270 (CDO26_37275) | 111310..112617 | - | 1308 | WP_088199210.1 | extracellular solute-binding protein | - |
| CDO26_RS37275 (CDO26_37280) | 112676..114283 | - | 1608 | WP_088199211.1 | sulfatase | - |
| CDO26_RS37280 (CDO26_37285) | 114493..115404 | + | 912 | WP_012881198.1 | LysR family transcriptional regulator | - |
| CDO26_RS40695 | 115703..116182 | - | 480 | WP_234896267.1 | hypothetical protein | - |
| CDO26_RS37290 (CDO26_37295) | 117118..117828 | - | 711 | WP_088199212.1 | sulfotransferase family 2 domain-containing protein | - |
| CDO26_RS37295 (CDO26_37300) | 117944..119854 | - | 1911 | WP_088199213.1 | Bifunctional enzyme CysN/CysC | VF |
| CDO26_RS37300 (CDO26_37305) | 119854..120747 | - | 894 | WP_012881192.1 | sulfate adenylyltransferase subunit CysD | - |
| CDO26_RS37305 (CDO26_37310) | 120933..121027 | - | 95 | Protein_115 | IS66 family insertion sequence element accessory protein TnpB | - |
| CDO26_RS39485 | 121089..121256 | - | 168 | WP_164835305.1 | antitoxin VbhA family protein | - |
| CDO26_RS37310 (CDO26_37315) | 121574..122504 | + | 931 | Protein_117 | TauD/TfdA family dioxygenase | - |
| CDO26_RS37315 (CDO26_37320) | 122532..123617 | + | 1086 | WP_234896374.1 | ABC transporter substrate-binding protein | - |
| CDO26_RS40700 | 123679..124137 | + | 459 | WP_234896375.1 | hypothetical protein | - |
| CDO26_RS40705 | 124134..124403 | + | 270 | WP_280641141.1 | ABC transporter permease subunit | - |
| CDO26_RS37325 (CDO26_37330) | 124491..125279 | + | 789 | WP_088199214.1 | ABC transporter permease | - |
| CDO26_RS37330 (CDO26_37335) | 125276..126115 | + | 840 | WP_167693623.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|