MGE detailed information
MGE type: Prophage MGE length: 68040 bp
Accession: NZ_CP021808 Location: 3552156..3620195 Organism: Sinorhizobium meliloti strain Rm41 Replicon: chromosome
Accession: NZ_CP021808 Location: 3552156..3620195 Organism: Sinorhizobium meliloti strain Rm41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO27_RS17530 () | 3548080..3549093 | - | 1014 | WP_010969001.1 | zinc-binding alcohol dehydrogenase family protein | - |
| CDO27_RS17535 () | 3549194..3549595 | + | 402 | WP_015007347.1 | helix-turn-helix transcriptional regulator | - |
| CDO27_RS17540 () | 3549734..3550660 | + | 927 | WP_010969003.1 | diacylglycerol kinase family lipid kinase | - |
| CDO27_RS17545 () | 3550676..3552163 | - | 1488 | WP_010969004.1 | glycosyltransferase family 39 protein | - |
| CDO27_RS17550 () | 3552156..3553175 | - | 1020 | WP_015007348.1 | glycosyltransferase family 2 protein | - |
| CDO27_RS17555 () | 3553271..3554227 | + | 957 | WP_003527322.1 | flippase-like domain-containing protein | - |
| CDO27_RS17560 () | 3554256..3555758 | - | 1503 | WP_003527321.1 | AMP nucleosidase | - |
| CDO27_RS17565 () | 3555838..3556158 | - | 321 | WP_003527320.1 | YnfA family protein | - |
| CDO27_RS17570 () | 3556233..3556406 | - | 174 | WP_010969006.1 | hypothetical protein | - |
| CDO27_RS17575 () | 3556420..3556593 | - | 174 | WP_003527318.1 | hypothetical protein | - |
| CDO27_RS17580 () | 3556829..3557530 | + | 702 | WP_014529127.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| CDO27_RS17585 () | 3557754..3558095 | - | 342 | WP_010969008.1 | DUF2147 domain-containing protein | - |
| CDO27_RS17590 () | 3558680..3558946 | + | 267 | WP_003527312.1 | sel1 repeat family protein | - |
| CDO27_RS17595 () | 3558968..3560089 | - | 1122 | WP_010969009.1 | pyridoxal phosphate-dependent aminotransferase | - |
| CDO27_RS17600 () | 3560496..3561584 | - | 1089 | WP_015007349.1 | hypothetical protein ; Integrase | Integrase |
| CDO27_RS17605 () | 3561769..3562134 | - | 366 | WP_015007350.1 | phage protein | - |
| CDO27_RS36675 () | 3562131..3562892 | - | 762 | WP_015007351.1 | hypothetical protein | - |
| CDO27_RS17615 () | 3562889..3563152 | - | 264 | WP_015007352.1 | hypothetical protein | - |
| CDO27_RS17620 () | 3563149..3563583 | - | 435 | WP_015007353.1 | DUF968 domain-containing protein | - |
| CDO27_RS36200 () | 3563580..3563741 | - | 162 | WP_015007354.1 | hypothetical protein | - |
| CDO27_RS17625 () | 3563738..3564136 | - | 399 | WP_015007355.1 | DUF4326 domain-containing protein | - |
| CDO27_RS17630 () | 3564133..3564375 | - | 243 | WP_080599734.1 | hypothetical protein | - |
| CDO27_RS17635 () | 3564372..3564644 | - | 273 | WP_015007356.1 | hypothetical protein | - |
| CDO27_RS17640 () | 3564641..3565105 | - | 465 | WP_015007357.1 | hypothetical protein | - |
| CDO27_RS17645 () | 3565102..3565458 | - | 357 | WP_015007358.1 | hypothetical protein | - |
| CDO27_RS17650 () | 3565455..3565886 | - | 432 | WP_015007359.1 | hypothetical protein | - |
| CDO27_RS17655 () | 3565889..3566839 | - | 951 | WP_015007360.1 | hypothetical protein | - |
| CDO27_RS17660 () | 3566836..3567078 | - | 243 | WP_015007361.1 | hypothetical protein | - |
| CDO27_RS17665 () | 3567078..3568052 | - | 975 | WP_041169364.1 | hypothetical protein | - |
| CDO27_RS17670 () | 3568049..3568285 | - | 237 | WP_015007363.1 | hypothetical protein | - |
| CDO27_RS17675 () | 3568285..3568605 | - | 321 | WP_015007364.1 | Arc family DNA-binding protein | - |
| CDO27_RS17680 () | 3568605..3568859 | - | 255 | WP_015007365.1 | Arc family DNA-binding protein | - |
| CDO27_RS17685 () | 3568856..3569170 | - | 315 | WP_015007366.1 | hypothetical protein | - |
| CDO27_RS17695 () | 3569763..3570044 | + | 282 | WP_015007367.1 | hypothetical protein | - |
| CDO27_RS17700 () | 3570054..3570806 | - | 753 | WP_015007368.1 | helix-turn-helix domain-containing protein | - |
| CDO27_RS17705 () | 3570901..3571098 | + | 198 | WP_015007369.1 | helix-turn-helix domain-containing protein | - |
| CDO27_RS17710 () | 3571101..3571349 | - | 249 | WP_015007370.1 | hypothetical protein | - |
| CDO27_RS17715 () | 3571436..3571723 | + | 288 | WP_015007371.1 | hypothetical protein | - |
| CDO27_RS17720 () | 3571724..3571966 | + | 243 | Protein_3356 | DUF2312 domain-containing protein | - |
| CDO27_RS17725 () | 3572108..3572344 | + | 237 | Protein_3357 | hypothetical protein | - |
| CDO27_RS17735 () | 3573584..3573937 | + | 354 | WP_015007376.1 | hypothetical protein | - |
| CDO27_RS17740 () | 3573934..3576483 | + | 2550 | WP_015007377.1 | DNA methylase N-4 | - |
| CDO27_RS17745 () | 3576480..3576833 | + | 354 | WP_015007378.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CDO27_RS17750 () | 3576830..3577711 | + | 882 | WP_015007379.1 | hypothetical protein | - |
| CDO27_RS17755 () | 3577708..3578532 | + | 825 | WP_041169366.1 | DUF1376 domain-containing protein | - |
| CDO27_RS17760 () | 3578474..3579250 | + | 777 | WP_015007381.1 | hypothetical protein | - |
| CDO27_RS17765 () | 3579247..3579675 | + | 429 | WP_015007382.1 | GcrA cell cycle regulator | - |
| CDO27_RS17770 () | 3579672..3580199 | + | 528 | WP_015007383.1 | hypothetical protein | - |
| CDO27_RS36680 () | 3580196..3580336 | + | 141 | WP_015007384.1 | hypothetical protein | - |
| CDO27_RS17775 () | 3580333..3580944 | + | 612 | WP_015007385.1 | hypothetical protein | - |
| CDO27_RS17785 () | 3581393..3581548 | + | 156 | WP_015007386.1 | hypothetical protein | - |
| CDO27_RS17790 () | 3581580..3581810 | + | 231 | WP_015007387.1 | hypothetical protein | - |
| CDO27_RS17795 () | 3581902..3582183 | - | 282 | WP_015007388.1 | hypothetical protein | - |
| CDO27_RS36205 () | 3582420..3582926 | + | 507 | WP_153444852.1 | hypothetical protein | - |
| CDO27_RS17810 () | 3582951..3583415 | + | 465 | WP_015007390.1 | DUF2280 domain-containing protein | - |
| CDO27_RS17815 () | 3583402..3584814 | + | 1413 | WP_015007391.1 | phage terminase large subunit | - |
| CDO27_RS17820 () | 3584811..3586181 | + | 1371 | WP_015007392.1 | DUF1073 domain-containing protein | - |
| CDO27_RS17825 () | 3586178..3587293 | + | 1116 | WP_015007393.1 | hypothetical protein | - |
| CDO27_RS17830 () | 3587296..3587748 | + | 453 | WP_003528157.1 | hypothetical protein | - |
| CDO27_RS17835 () | 3587763..3588812 | + | 1050 | WP_003528159.1 | hypothetical protein | - |
| CDO27_RS17840 () | 3588871..3589194 | + | 324 | WP_015007394.1 | hypothetical protein | - |
| CDO27_RS17845 () | 3589198..3589692 | + | 495 | WP_015007395.1 | hypothetical protein | - |
| CDO27_RS17850 () | 3589692..3590057 | + | 366 | WP_015007396.1 | hypothetical protein | - |
| CDO27_RS36210 () | 3590054..3590215 | + | 162 | WP_015007397.1 | hypothetical protein | - |
| CDO27_RS36685 () | 3590227..3590385 | + | 159 | WP_015007398.1 | hypothetical protein | - |
| CDO27_RS17855 () | 3590382..3590645 | + | 264 | WP_015007399.1 | hypothetical protein | - |
| CDO27_RS17860 () | 3590703..3591701 | + | 999 | WP_015007400.1 | head morphogenesis protein SPP1 gp7 | - |
| CDO27_RS17865 () | 3591701..3592183 | + | 483 | WP_015007401.1 | hypothetical protein | - |
| CDO27_RS17875 () | 3592359..3592802 | + | 444 | WP_015007403.1 | hypothetical protein | - |
| CDO27_RS17880 () | 3592859..3593596 | + | 738 | WP_015007404.1 | hypothetical protein | - |
| CDO27_RS17885 () | 3593597..3594010 | + | 414 | WP_015007405.1 | hypothetical protein | - |
| CDO27_RS17890 () | 3594106..3594351 | + | 246 | WP_015007406.1 | hypothetical protein | - |
| CDO27_RS17895 () | 3594358..3597231 | + | 2874 | WP_015007407.1 | phage tail length tape measure family protein | - |
| CDO27_RS17900 () | 3597235..3597969 | + | 735 | WP_015007408.1 | hypothetical protein | - |
| CDO27_RS17905 () | 3597969..3598568 | + | 600 | WP_015007409.1 | hypothetical protein | - |
| CDO27_RS17910 () | 3598577..3598996 | + | 420 | WP_015007410.1 | hypothetical protein | - |
| CDO27_RS17915 () | 3598993..3601587 | + | 2595 | WP_015007411.1 | hypothetical protein | - |
| CDO27_RS17920 () | 3601642..3602946 | + | 1305 | WP_015007412.1 | SGNH/GDSL hydrolase family protein | - |
| CDO27_RS17925 () | 3602959..3603780 | + | 822 | WP_015007413.1 | hypothetical protein | - |
| CDO27_RS17930 () | 3603777..3604142 | - | 366 | WP_015007414.1 | hypothetical protein | - |
| CDO27_RS17935 () | 3604124..3604351 | - | 228 | WP_015007415.1 | hypothetical protein | - |
| CDO27_RS17940 () | 3604360..3605061 | - | 702 | WP_015007416.1 | hypothetical protein | - |
| CDO27_RS17950 () | 3605782..3606123 | - | 342 | WP_041169300.1 | hypothetical protein | - |
| CDO27_RS17955 () | 3606769..3607029 | - | 261 | WP_017272559.1 | hypothetical protein | - |
| CDO27_RS17965 () | 3607526..3608494 | + | 969 | WP_015007419.1 | chitinase | - |
| CDO27_RS17970 () | 3608495..3608731 | + | 237 | WP_153444851.1 | hypothetical protein | - |
| CDO27_RS17980 () | 3608913..3609278 | + | 366 | WP_015007420.1 | hypothetical protein | - |
| CDO27_RS36690 () | 3610863..3611033 | - | 171 | WP_080599795.1 | hypothetical protein | - |
| CDO27_RS17995 () | 3611126..3612100 | + | 975 | WP_051032088.1 | non-homologous end-joining DNA ligase | - |
| CDO27_RS18005 () | 3612439..3612690 | - | 252 | WP_042708639.1 | hypothetical protein | - |
| CDO27_RS18010 () | 3612680..3612988 | - | 309 | WP_010969010.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| CDO27_RS18015 () | 3613002..3613298 | - | 297 | WP_010969011.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDO27_RS18020 () | 3613346..3613651 | - | 306 | WP_003527305.1 | hypothetical protein | - |
| CDO27_RS18025 () | 3613979..3615016 | + | 1038 | WP_003527304.1 | porin | - |
| CDO27_RS18030 () | 3615126..3616193 | - | 1068 | WP_015007424.1 | hypothetical protein | VF |
| CDO27_RS18035 () | 3616234..3617283 | - | 1050 | WP_013844229.1 | porin | - |
| CDO27_RS18040 () | 3617497..3617985 | - | 489 | WP_013844230.1 | BA14K family protein | - |
| CDO27_RS18045 () | 3618153..3620195 | - | 2043 | WP_014526651.1 | lytic transglycosylase domain-containing protein | - |
| CDO27_RS18050 () | 3620495..3621379 | + | 885 | WP_003527298.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| CDO27_RS18055 () | 3621379..3621858 | + | 480 | WP_010969015.1 | SsrA-binding protein SmpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|