MGE detailed information
MGE type: Prophage MGE length: 35563 bp
Accession: NZ_CP021775 Location: 5399483..5435045 Organism: Pseudomonas aeruginosa strain Pa58 Replicon: chromosome
Accession: NZ_CP021775 Location: 5399483..5435045 Organism: Pseudomonas aeruginosa strain Pa58 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDL16_RS26255 () | 5395216..5396049 | + | 834 | WP_003134328.1 | metal-dependent hydrolase | - |
| CDL16_RS26260 () | 5396184..5397125 | - | 942 | WP_003085798.1 | alpha/beta hydrolase | - |
| CDL16_RS26265 () | 5397234..5397917 | - | 684 | WP_003134331.1 | TetR/AcrR family transcriptional regulator | - |
| CDL16_RS26270 () | 5398005..5398883 | + | 879 | WP_003134334.1 | hypothetical protein | - |
| CDL16_RS26280 () | 5399483..5400739 | + | 1257 | WP_023094887.1 | Prophage integrase IntA ; Integrase | Integrase |
| CDL16_RS26285 () | 5400770..5401066 | - | 297 | WP_071543057.1 | DCL family protein | - |
| CDL16_RS26290 () | 5401094..5403694 | - | 2601 | WP_003134336.1 | DEAD/DEAH box helicase | - |
| CDL16_RS26295 () | 5403694..5404641 | - | 948 | WP_023435474.1 | DUF1837 domain-containing protein | - |
| CDL16_RS26300 () | 5404882..5405211 | + | 330 | WP_023094888.1 | hypothetical protein | - |
| CDL16_RS26305 () | 5405306..5406274 | + | 969 | WP_003126784.1 | DUF932 domain-containing protein | - |
| CDL16_RS26310 () | 5406350..5407354 | + | 1005 | WP_023094889.1 | YqaJ viral recombinase family protein | - |
| CDL16_RS26315 () | 5407445..5408395 | + | 951 | WP_023094890.1 | hypothetical protein | - |
| CDL16_RS26320 () | 5408367..5408864 | + | 498 | WP_003134344.1 | DNA repair protein RadC | - |
| CDL16_RS26325 () | 5408878..5409087 | + | 210 | WP_023094891.1 | hypothetical protein | - |
| CDL16_RS26330 () | 5409147..5409452 | + | 306 | WP_023094892.1 | hypothetical protein | - |
| CDL16_RS26335 () | 5409439..5409786 | - | 348 | WP_023094893.1 | helix-turn-helix domain-containing protein | - |
| CDL16_RS26340 () | 5409918..5410271 | + | 354 | WP_003127880.1 | hypothetical protein | - |
| CDL16_RS26345 () | 5410433..5411701 | + | 1269 | WP_023094894.1 | hypothetical protein | - |
| CDL16_RS35410 () | 5411777..5412157 | - | 381 | WP_123809169.1 | hypothetical protein | - |
| CDL16_RS26350 () | 5412475..5415576 | - | 3102 | WP_003134349.1 | type I restriction endonuclease subunit R | - |
| CDL16_RS26355 () | 5415586..5418837 | - | 3252 | WP_003134351.1 | DEAD/DEAH box helicase | - |
| CDL16_RS26360 () | 5418837..5420513 | - | 1677 | WP_023094895.1 | hypothetical protein | - |
| CDL16_RS26365 () | 5420514..5421251 | - | 738 | WP_003127984.1 | OmpA family protein | - |
| CDL16_RS26370 () | 5421264..5423459 | - | 2196 | WP_003127983.1 | anti-phage defense ZorAB system ZorA | - |
| CDL16_RS26375 () | 5423531..5424880 | - | 1350 | WP_003134354.1 | restriction endonuclease subunit S | - |
| CDL16_RS26380 () | 5424870..5426780 | - | 1911 | WP_023094896.1 | type I restriction-modification system subunit M | - |
| CDL16_RS26385 () | 5427012..5427674 | - | 663 | WP_023094897.1 | hypothetical protein | - |
| CDL16_RS26390 () | 5427812..5428687 | + | 876 | WP_003127947.1 | WYL domain-containing protein | - |
| CDL16_RS26395 () | 5428702..5429279 | + | 578 | Protein_5103 | plasmid pRiA4b ORF-3 family protein | - |
| CDL16_RS26410 () | 5431300..5431854 | - | 555 | WP_074197746.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CDL16_RS26415 () | 5432029..5432304 | - | 276 | WP_004364115.1 | hypothetical protein | - |
| CDL16_RS26420 () | 5432304..5432636 | - | 333 | WP_016561578.1 | hypothetical protein | - |
| CDL16_RS35085 () | 5432691..5432810 | + | 120 | Protein_5108 | IS5/IS1182 family transposase | - |
| CDL16_RS26425 () | 5432926..5433249 | - | 324 | WP_004364117.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CDL16_RS26430 () | 5433242..5433607 | - | 366 | WP_015503432.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDL16_RS26435 () | 5433871..5434110 | - | 240 | WP_044069615.1 | hypothetical protein | - |
| CDL16_RS26440 () | 5434317..5434589 | + | 273 | WP_004364121.1 | hypothetical protein | - |
| CDL16_RS26445 () | 5434620..5435045 | - | 426 | WP_003116492.1 | VOC family protein | - |
| CDL16_RS26450 () | 5435146..5436030 | + | 885 | WP_004364122.1 | LysR family transcriptional regulator | - |
| CDL16_RS26455 () | 5436003..5436956 | - | 954 | WP_003085661.1 | LysR family transcriptional regulator | - |
| CDL16_RS26460 () | 5437177..5437611 | + | 435 | WP_003158601.1 | RidA family protein | - |
| CDL16_RS26465 () | 5437608..5438855 | + | 1248 | WP_003140896.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|