MGE detailed information
MGE type: Genomic_island MGE length: 43706 bp
Accession: NZ_CP021774 Location: 2597111..2640816 Organism: Pseudomonas aeruginosa strain Pa124 Replicon: chromosome
Accession: NZ_CP021774 Location: 2597111..2640816 Organism: Pseudomonas aeruginosa strain Pa124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG41_RS12525 () | 2592304..2592660 | + | 357 | WP_003099086.1 | 50S ribosomal protein L20 | - |
| CDG41_RS12530 () | 2592758..2593774 | + | 1017 | WP_023095443.1 | phenylalanine--tRNA ligase subunit alpha | - |
| CDG41_RS12535 () | 2593809..2596187 | + | 2379 | WP_003116602.1 | phenylalanine--tRNA ligase subunit beta | - |
| CDG41_RS12540 () | 2596191..2596493 | + | 303 | WP_003090661.1 | integration host factor subunit alpha | - |
| CDG41_RS12545 () | 2596474..2596830 | + | 357 | WP_003090655.1 | MerR family transcriptional regulator | - |
| CDG41_RS33600 () | 2597111..2597962 | - | 852 | WP_125176821.1 | hypothetical protein | - |
| CDG41_RS12560 () | 2598561..2598815 | + | 255 | WP_034065961.1 | AlpA family transcriptional regulator | - |
| CDG41_RS12565 () | 2599282..2599980 | + | 699 | WP_034065959.1 | inovirus Gp2 family protein | - |
| CDG41_RS12570 () | 2600317..2602230 | + | 1914 | WP_079389568.1 | hypothetical protein | - |
| CDG41_RS12575 () | 2602441..2603343 | + | 903 | WP_034065956.1 | WYL domain-containing protein | - |
| CDG41_RS12580 () | 2603348..2605426 | + | 2079 | WP_034065955.1 | RecQ family ATP-dependent DNA helicase | - |
| CDG41_RS12585 () | 2605423..2606832 | + | 1410 | WP_034065954.1 | DNA-processing protein DprA | - |
| CDG41_RS12590 () | 2606898..2608394 | + | 1497 | WP_198345167.1 | type I restriction-modification system subunit M | - |
| CDG41_RS12595 () | 2608391..2609917 | + | 1527 | WP_034065951.1 | type I restriction-modification system subunit M | - |
| CDG41_RS12600 () | 2609910..2611118 | + | 1209 | WP_034065950.1 | restriction endonuclease subunit S | - |
| CDG41_RS12605 () | 2611108..2614107 | + | 3000 | WP_034065949.1 | HsdR family type I site-specific deoxyribonuclease | - |
| CDG41_RS12610 () | 2614120..2616342 | + | 2223 | WP_034065948.1 | AAA family ATPase | - |
| CDG41_RS12615 () | 2616342..2617481 | + | 1140 | WP_034065963.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| CDG41_RS12620 () | 2617602..2618102 | + | 501 | WP_087930948.1 | hypothetical protein | - |
| CDG41_RS12625 () | 2618130..2619113 | - | 984 | WP_013973047.1 | IS5 family transposase IS2000 | Transposase |
| CDG41_RS12630 () | 2619188..2620414 | + | 1227 | Protein_2439 | hypothetical protein | - |
| CDG41_RS12635 () | 2620608..2620790 | - | 183 | WP_034065757.1 | hypothetical protein | - |
| CDG41_RS12640 () | 2620800..2621294 | - | 495 | WP_034065758.1 | DNA repair protein RadC | - |
| CDG41_RS12645 () | 2621266..2621945 | - | 680 | Protein_2442 | hypothetical protein | - |
| CDG41_RS12650 () | 2622038..2623042 | - | 1005 | WP_034065759.1 | YqaJ viral recombinase family protein | - |
| CDG41_RS12655 () | 2623122..2624090 | - | 969 | WP_034065760.1 | DUF932 domain-containing protein | - |
| CDG41_RS12660 () | 2624188..2624460 | - | 273 | WP_178097537.1 | hypothetical protein | - |
| CDG41_RS12665 () | 2624868..2630915 | + | 6048 | WP_034065761.1 | hypothetical protein | - |
| CDG41_RS12670 () | 2631068..2631313 | + | 246 | WP_034065762.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CDG41_RS12675 () | 2631437..2631709 | + | 273 | WP_003155922.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CDG41_RS12680 () | 2631697..2631990 | + | 294 | WP_010953434.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDG41_RS12685 () | 2631984..2633393 | - | 1410 | WP_034065764.1 | Prophage integrase IntA ; Integrase | Integrase |
| CDG41_RS12690 () | 2633810..2634511 | - | 702 | WP_031640384.1 | hypothetical protein | - |
| CDG41_RS12695 () | 2634627..2634773 | + | 147 | Protein_2452 | DNA binding protein | - |
| CDG41_RS33955 () | 2634901..2635977 | - | 1077 | WP_049875006.1 | hypothetical protein | - |
| CDG41_RS12705 () | 2636681..2637166 | - | 486 | WP_073699702.1 | hypothetical protein | - |
| CDG41_RS12710 () | 2637163..2638326 | - | 1164 | WP_031636348.1 | DUF4297 domain-containing protein | - |
| CDG41_RS12715 () | 2638802..2639221 | - | 420 | Protein_2456 | group II truncated hemoglobin | - |
| CDG41_RS12725 () | 2639444..2640606 | - | 1163 | Protein_2457 | IS3 family transposase | - |
| CDG41_RS33610 () | 2640673..2640816 | - | 144 | Protein_2458 | type I toxin-antitoxin system SymE family toxin | - |
| CDG41_RS12730 () | 2640981..2642330 | - | 1350 | WP_023095451.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|