MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 114968 bp
Accession: NZ_CP021729 Location: 1..114968 Organism: Escherichia coli strain Combat11I9 Replicon: plasmid pCombat11I9-3
Accession: NZ_CP021729 Location: 1..114968 Organism: Escherichia coli strain Combat11I9 Replicon: plasmid pCombat11I9-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDC27_RS27865 () | 3..1941 | + | 1939 | Protein_0 | transglycosylase SLT domain-containing protein | - |
| CDC27_RS27875 () | 2293..3727 | + | 1435 | Protein_1 | bleomycin hydrolase | - |
| CDC27_RS27880 () | 3727..4563 | + | 837 | WP_001189836.1 | hypothetical protein | - |
| CDC27_RS27885 () | 4642..5076 | + | 435 | WP_001286326.1 | hypothetical protein | - |
| CDC27_RS27890 () | 5088..8507 | + | 3420 | WP_148119536.1 | tail fiber protein | - |
| CDC27_RS27895 () | 8507..9124 | + | 618 | WP_148119537.1 | tail fiber assembly protein | - |
| CDC27_RS27900 () | 9088..9633 | - | 546 | WP_032163794.1 | Serine acetyltransferase | VF |
| CDC27_RS27910 () | 10657..10986 | + | 330 | WP_000887652.1 | holin | - |
| CDC27_RS27915 () | 10983..11426 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| CDC27_RS27920 () | 11413..12015 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| CDC27_RS27925 () | 12017..13936 | + | 1920 | WP_065749890.1 | hypothetical protein | - |
| CDC27_RS27930 () | 13933..14298 | + | 366 | WP_065749875.1 | ddrA | - |
| CDC27_RS27935 () | 14338..15546 | - | 1209 | WP_148119538.1 | IS200-IS605 family transposase IS609 | Transposase |
| CDC27_RS27940 () | 15646..18633 | + | 2988 | WP_148119539.1 | hypothetical protein | - |
| CDC27_RS27945 () | 18623..18931 | + | 309 | WP_024231022.1 | hypothetical protein | - |
| CDC27_RS27950 () | 19674..20789 | + | 1116 | WP_148119540.1 | porin OmpC | - |
| CDC27_RS27955 () | 21023..21511 | - | 489 | WP_148119541.1 | single-stranded DNA-binding protein | - |
| CDC27_RS27960 () | 21681..22238 | + | 558 | WP_148119552.1 | lysozyme | - |
| CDC27_RS27970 () | 22530..23549 | - | 1020 | WP_148119542.1 | head processing protein | - |
| CDC27_RS27975 () | 23542..25251 | - | 1710 | WP_000774703.1 | hypothetical protein | - |
| CDC27_RS27980 () | 25327..32094 | + | 6768 | WP_148119543.1 | N-6 DNA methylase | - |
| CDC27_RS27985 () | 32128..32568 | + | 441 | WP_015974230.1 | hypothetical protein | - |
| CDC27_RS27990 () | 32565..32813 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| CDC27_RS27995 () | 32959..34905 | + | 1947 | WP_032190829.1 | site-specific DNA-methyltransferase | - |
| CDC27_RS28000 () | 34908..37820 | + | 2913 | WP_015974229.1 | type III restriction-modification system endonuclease | - |
| CDC27_RS28005 () | 37896..38537 | - | 642 | WP_024175651.1 | hypothetical protein | - |
| CDC27_RS28010 () | 38727..39287 | - | 561 | WP_015974227.1 | Ref family protein | - |
| CDC27_RS28015 () | 39535..39846 | - | 312 | WP_001224246.1 | hypothetical protein | - |
| CDC27_RS28020 () | 39897..40928 | - | 1032 | WP_000067530.1 | site-specific integrase | - |
| CDC27_RS28025 () | 40936..41157 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| CDC27_RS28040 () | 41762..41971 | + | 210 | WP_148119544.1 | c1 repressor inactivator | - |
| CDC27_RS28045 () | 42082..42933 | + | 852 | WP_000611665.1 | hypothetical protein | - |
| CDC27_RS28050 () | 42959..44443 | - | 1485 | WP_000124150.1 | terminase | - |
| CDC27_RS28055 () | 44443..45636 | - | 1194 | WP_106489616.1 | terminase | - |
| CDC27_RS28060 () | 45723..46175 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| CDC27_RS28065 () | 46264..47307 | - | 1044 | WP_000648827.1 | DUF968 domain-containing protein | - |
| CDC27_RS28070 () | 47335..47514 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| CDC27_RS28075 () | 47519..47899 | - | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CDC27_RS28080 () | 47899..48120 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CDC27_RS28085 () | 48193..48582 | - | 390 | WP_000506730.1 | DNA repair protein | - |
| CDC27_RS28090 () | 48757..49341 | + | 585 | WP_044068914.1 | hypothetical protein | - |
| CDC27_RS28095 () | 49342..49704 | + | 363 | WP_044068912.1 | hypothetical protein | - |
| CDC27_RS28100 () | 49716..49955 | - | 240 | WP_023356286.1 | DNA polymerase III subunit theta | - |
| CDC27_RS28110 () | 50270..51028 | - | 759 | WP_032353390.1 | hypothetical protein | - |
| CDC27_RS28115 () | 51025..51399 | - | 375 | WP_032353387.1 | hypothetical protein | - |
| CDC27_RS28120 () | 51406..51699 | - | 294 | WP_000269001.1 | hypothetical protein | - |
| CDC27_RS28125 () | 51878..52111 | - | 234 | WP_000517421.1 | hypothetical protein | - |
| CDC27_RS28130 () | 52194..53384 | - | 1191 | WP_000206787.1 | DUF551 domain-containing protein | - |
| CDC27_RS28135 () | 53395..53592 | - | 198 | WP_000360279.1 | hypothetical protein | - |
| CDC27_RS28140 () | 53598..54344 | - | 747 | WP_000151158.1 | ead/Ea22-like family protein | - |
| CDC27_RS28145 () | 54341..54985 | - | 645 | WP_032353952.1 | hypothetical protein | - |
| CDC27_RS28150 () | 54982..55221 | - | 240 | WP_000476205.1 | hypothetical protein | - |
| CDC27_RS28155 () | 55214..55417 | - | 204 | WP_000158002.1 | hypothetical protein | - |
| CDC27_RS28160 () | 55414..56292 | - | 879 | WP_072650063.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| CDC27_RS28165 () | 56296..57024 | - | 729 | WP_148119545.1 | hypothetical protein | - |
| CDC27_RS28170 () | 57219..57725 | - | 507 | WP_000021766.1 | hypothetical protein | - |
| CDC27_RS28175 () | 57798..59060 | - | 1263 | WP_000107689.1 | hypothetical protein | - |
| CDC27_RS28185 () | 59362..60063 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| CDC27_RS28190 () | 60060..60737 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| CDC27_RS28195 () | 60734..61360 | - | 627 | WP_000484110.1 | norphogenetic protein | - |
| CDC27_RS28205 () | 61862..62017 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| CDC27_RS28210 () | 62084..62662 | - | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| CDC27_RS28215 () | 62665..62910 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| CDC27_RS28220 () | 63057..63434 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| CDC27_RS28225 () | 63444..64661 | + | 1218 | WP_001141908.1 | hypothetical protein | - |
| CDC27_RS28230 () | 64665..65393 | + | 729 | WP_000896801.1 | hypothetical protein | - |
| CDC27_RS28235 () | 65380..66165 | + | 786 | WP_000602719.1 | hypothetical protein | - |
| CDC27_RS28240 () | 66167..67183 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| CDC27_RS28245 () | 67176..67808 | + | 633 | WP_000535202.1 | baseplate protein | - |
| CDC27_RS28250 () | 67855..68853 | - | 999 | WP_032167108.1 | hypothetical protein | - |
| CDC27_RS28255 () | 68853..70217 | - | 1365 | WP_106104757.1 | replicative DNA helicase | - |
| CDC27_RS29110 () | 70685..70849 | - | 165 | WP_000234829.1 | DUF3927 family protein | - |
| CDC27_RS28265 () | 70849..71274 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| CDC27_RS28285 () | 72835..76122 | - | 3288 | WP_148119546.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CDC27_RS28290 () | 76119..77024 | - | 906 | WP_061355005.1 | recombination-associated protein RdgC | - |
| CDC27_RS28295 () | 77017..77301 | - | 285 | WP_001177863.1 | hypothetical protein | - |
| CDC27_RS28305 () | 77764..78552 | + | 789 | WP_148119547.1 | hypothetical protein | - |
| CDC27_RS28310 () | 78592..79014 | + | 423 | WP_000007767.1 | hypothetical protein | - |
| CDC27_RS28315 () | 79192..79584 | + | 393 | WP_001281116.1 | hypothetical protein | - |
| CDC27_RS28320 () | 79902..80762 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| CDC27_RS28330 () | 81162..82367 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| CDC27_RS28335 () | 82364..83329 | + | 966 | WP_000725191.1 | ParB/RepB/Spo0J family partition protein | - |
| CDC27_RS28340 () | 83596..85302 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| CDC27_RS28345 () | 85363..86952 | + | 1590 | WP_000085146.1 | hypothetical protein | - |
| CDC27_RS28350 () | 86962..87777 | + | 816 | WP_000041771.1 | hypothetical protein | - |
| CDC27_RS29315 () | 87813..88394 | + | 582 | WP_199780367.1 | hypothetical protein | - |
| CDC27_RS28365 () | 88406..88915 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| CDC27_RS28370 () | 89087..89683 | + | 597 | WP_053896077.1 | hypothetical protein | - |
| CDC27_RS28380 () | 90174..90689 | - | 516 | WP_000758232.1 | Attachment invasion locus protein | VF |
| CDC27_RS28385 () | 90785..91627 | - | 843 | WP_148119548.1 | Replication protein repL | - |
| CDC27_RS28390 () | 91657..92457 | - | 801 | WP_032323888.1 | phage antirepressor KilAC domain-containing protein | - |
| CDC27_RS28395 () | 92622..93668 | - | 1047 | WP_148119549.1 | phage antirepressor KilAC domain-containing protein | - |
| CDC27_RS28400 () | 93665..93886 | - | 222 | WP_000245712.1 | host cell division inhibitor Icd-like protein | - |
| CDC27_RS28410 () | 94506..95018 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| CDC27_RS28415 () | 95022..95561 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| CDC27_RS28420 () | 95642..96208 | + | 567 | WP_000188923.1 | hypothetical protein | - |
| CDC27_RS28425 () | 96219..96830 | + | 612 | WP_072646608.1 | phage tail protein | - |
| CDC27_RS28430 () | 96845..97726 | + | 882 | WP_000926345.1 | hypothetical protein | - |
| CDC27_RS28435 () | 97808..101230 | + | 3423 | WP_148119550.1 | transglycosylase SLT domain-containing protein | - |
| CDC27_RS28440 () | 101230..101586 | + | 357 | WP_148119551.1 | hypothetical protein | - |
| CDC27_RS28445 () | 101583..103016 | + | 1434 | WP_000047923.1 | bleomycin hydrolase | - |
| CDC27_RS28450 () | 103016..103852 | + | 837 | WP_001189836.1 | hypothetical protein | - |
| CDC27_RS28455 () | 103931..104365 | + | 435 | WP_001286326.1 | hypothetical protein | - |
| CDC27_RS28460 () | 104377..107796 | + | 3420 | WP_148119536.1 | tail fiber protein | - |
| CDC27_RS28465 () | 107796..108413 | + | 618 | WP_148119537.1 | tail fiber assembly protein | - |
| CDC27_RS28470 () | 108377..108922 | - | 546 | WP_032163794.1 | Serine acetyltransferase | VF |
| CDC27_RS28480 () | 109946..110275 | + | 330 | WP_000887652.1 | holin | - |
| CDC27_RS28485 () | 110272..110715 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| CDC27_RS28490 () | 110702..111305 | + | 604 | Protein_108 | odaE | - |
| CDC27_RS28495 () | 111307..113210 | + | 1904 | Protein_109 | hypothetical protein | - |
| CDC27_RS28500 () | 113215..113580 | + | 366 | WP_065749875.1 | ddrA | - |
| CDC27_RS28505 () | 113620..114830 | - | 1211 | Protein_111 | IS200-IS605 family transposase IS609 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|