MGE detailed information
MGE type: Conjugative plasmid MGE length: 78638 bp
Accession: NZ_CP021711 Location: 1..78638 Organism: Klebsiella pneumoniae strain AR_0143 Replicon: plasmid tig00000856
Accession: NZ_CP021711 Location: 1..78638 Organism: Klebsiella pneumoniae strain AR_0143 Replicon: plasmid tig00000856
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM390_RS29400 () | 1368..1754 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| AM390_RS29405 () | 1751..2383 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| AM390_RS29410 () | 2380..3372 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| AM390_RS29415 () | 3402..3707 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| AM390_RS29420 () | 3716..4354 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM390_RS29425 () | 4351..6201 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM390_RS29430 () | 6228..6485 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| AM390_RS29435 () | 6472..7221 | + | 750 | WP_001336806.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM390_RS29440 () | 7235..7579 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| AM390_RS29445 () | 7698..7982 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM390_RS29450 () | 7969..8514 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM390_RS29455 () | 8444..8791 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AM390_RS29460 () | 8739..9164 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| AM390_RS29465 () | 9142..10524 | + | 1383 | WP_001309243.1 | conjugal transfer protein TraH | - |
| AM390_RS29470 () | 10521..13343 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM390_RS29475 () | 13359..13844 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| AM390_RS29480 () | 13893..14624 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AM390_RS29485 () | 14827..15564 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| AM390_RS29490 () | 15615..17804 | + | 2190 | WP_017901267.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM390_RS29495 () | 17804..23074 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM390_RS29500 () | 23094..23840 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AM390_RS29505 () | 23899..24759 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AM390_RS29510 () | 24862..25422 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AM390_RS29515 () | 25551..25763 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AM390_RS29525 () | 26043..26740 | + | 698 | Protein_25 | IS1 family transposase IS1R | Transposase |
| AM390_RS29530 () | 26785..27246 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AM390_RS29535 () | 27292..27501 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AM390_RS29540 () | 27539..28129 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| AM390_RS29545 () | 28369..28623 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| AM390_RS29555 () | 28861..28935 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AM390_RS29560 () | 28928..29785 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| AM390_RS29570 () | 30724..31377 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AM390_RS30725 () | 31470..31727 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AM390_RS29575 () | 31660..32061 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AM390_RS29580 () | 32198..35095 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| AM390_RS29585 () | 35190..35390 | + | 201 | Protein_36 | recombinase family protein | - |
| AM390_RS29590 () | 35444..36148 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM390_RS29595 () | 36213..38456 | - | 2244 | Protein_38 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM390_RS29600 () | 38470..38802 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AM390_RS29605 () | 38849..39724 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AM390_RS29610 () | 39980..41242 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| AM390_RS29615 () | 41448..41642 | - | 195 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM390_RS29620 () | 41806..42363 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AM390_RS29625 () | 42546..43406 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AM390_RS29630 () | 43553..46024 | - | 2472 | Protein_45 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| AM390_RS29635 () | 46027..46110 | - | 84 | Protein_46 | helix-turn-helix domain-containing protein | - |
| AM390_RS29640 () | 46167..46871 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AM390_RS29645 () | 46862..47002 | + | 141 | WP_071557810.1 | hypothetical protein | - |
| AM390_RS29660 () | 48451..48685 | + | 235 | Protein_49 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM390_RS29665 () | 48813..49094 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| AM390_RS29670 () | 49217..49567 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| AM390_RS29675 () | 49570..50532 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| AM390_RS29680 () | 50679..50972 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| AM390_RS29690 () | 51049..51732 | + | 684 | WP_000085883.1 | DNA methylase | - |
| AM390_RS29695 () | 51733..51954 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| AM390_RS29700 () | 51968..52402 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| AM390_RS31330 () | 52453..53229 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| AM390_RS29715 () | 53647..54072 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| AM390_RS29720 () | 54119..54541 | + | 423 | WP_001763816.1 | DUF1380 family protein | - |
| AM390_RS29725 () | 54538..54729 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| AM390_RS29740 () | 55767..55997 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AM390_RS29745 () | 56049..57410 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| AM390_RS29750 () | 57457..58020 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| AM390_RS29770 () | 58887..59414 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| AM390_RS29775 () | 59472..59705 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| AM390_RS29780 () | 59766..61734 | + | 1969 | Protein_66 | ParB/RepB/Spo0J family partition protein | - |
| AM390_RS29785 () | 61803..62237 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| AM390_RS29790 () | 62234..62953 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 62965..63189 | + | 225 | NuclAT_0 | - | - |
| - () | 62965..63189 | + | 225 | NuclAT_0 | - | - |
| - () | 62965..63189 | + | 225 | NuclAT_0 | - | - |
| - () | 62965..63189 | + | 225 | NuclAT_0 | - | - |
| - () | 63122..63187 | + | 66 | - | - | Antitoxin Detail |
| AM390_RS29800 () | 63233..63391 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AM390_RS29805 () | 63749..64174 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AM390_RS29810 () | 64171..64521 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AM390_RS29815 () | 64552..66165 | + | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| AM390_RS30730 () | 66250..66454 | - | 205 | Protein_73 | pilus protein | - |
| AM390_RS29835 () | 66846..67142 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| AM390_RS29840 () | 67253..68074 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| AM390_RS29845 () | 68371..68973 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| AM390_RS29850 () | 69296..69679 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| AM390_RS29855 () | 69873..70544 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| AM390_RS29860 () | 70681..70908 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| AM390_RS29865 () | 70941..71300 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| AM390_RS29870 () | 71315..71626 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| AM390_RS29875 () | 71648..72214 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| AM390_RS29880 () | 72201..72929 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| AM390_RS29885 () | 72929..74380 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| AM390_RS29890 () | 74349..74936 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| AM390_RS29895 () | 74875..75243 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| AM390_RS29900 () | 75240..75755 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM390_RS29905 () | 75890..76111 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| AM390_RS29910 () | 76104..76580 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| AM390_RS29915 () | 76660..76878 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| AM390_RS29920 () | 76906..77253 | + | 348 | WP_000836682.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|