MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95850 bp
Accession: NZ_CP021681 Location: 1..95850 Organism: Escherichia coli strain AR_0162 Replicon: plasmid tig00003056
Accession: NZ_CP021681 Location: 1..95850 Organism: Escherichia coli strain AR_0162 Replicon: plasmid tig00003056
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM408_RS00130 () | 792..1196 | + | 405 | Protein_1 | IS91 family transposase ISPps1 | Transposase |
| AM408_RS00135 () | 1303..2139 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| AM408_RS00140 () | 2139..2942 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| AM408_RS00145 () | 3003..3818 | - | 816 | WP_087760815.1 | Dihydropteroate synthase | ARG |
| AM408_RS00155 () | 4148..4324 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| AM408_RS00160 () | 4506..5510 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| AM408_RS00165 () | 5589..7355 | - | 1767 | Protein_7 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| AM408_RS00175 () | 7407..8111 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM408_RS00185 () | 8172..8990 | + | 819 | Protein_9 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM408_RS00190 () | 9048..9290 | + | 243 | WP_000844627.1 | transposase | - |
| AM408_RS00195 () | 9322..9972 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AM408_RS00200 () | 10078..11277 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| AM408_RS00205 () | 11309..12193 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| AM408_RS00210 () | 12331..12738 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| AM408_RS00215 () | 12727..14478 | + | 1752 | Protein_15 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM408_RS00225 () | 14824..15801 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| AM408_RS00230 () | 16127..16824 | - | 698 | Protein_17 | IS1 family transposase IS1R | Transposase |
| AM408_RS00240 () | 16879..17151 | - | 273 | Protein_18 | RepA protein | - |
| AM408_RS00245 () | 17424..19142 | - | 1719 | WP_087760816.1 | hybrid sensor histidine kinase/response regulator | - |
| AM408_RS00250 () | 19139..19627 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| AM408_RS00255 () | 19620..20603 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| AM408_RS00260 () | 20607..21521 | - | 915 | WP_000891983.1 | response regulator | - |
| AM408_RS00265 () | 21835..22143 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| AM408_RS00270 () | 22136..22351 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| AM408_RS00275 () | 22354..23016 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| AM408_RS00280 () | 23027..23326 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| AM408_RS00285 () | 23336..26086 | + | 2751 | WP_048659795.1 | Type IV secretion system protein virB4 | VF |
| AM408_RS00290 () | 26105..26821 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| AM408_RS00295 () | 26833..27117 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| AM408_RS00300 () | 27135..28142 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| AM408_RS26715 () | 28219..28359 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| AM408_RS00305 () | 28352..29038 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| AM408_RS00310 () | 29031..29924 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| AM408_RS00315 () | 29921..31117 | + | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| AM408_RS00320 () | 31121..32170 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| AM408_RS00325 () | 32157..32558 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| AM408_RS00330 () | 32649..32966 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| AM408_RS00335 () | 32993..33328 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| AM408_RS00340 () | 33304..33612 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| AM408_RS00345 () | 33609..35810 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| AM408_RS00350 () | 35807..36199 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| AM408_RS00355 () | 36908..38815 | + | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| AM408_RS00360 () | 38830..39576 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| AM408_RS00365 () | 39569..40096 | + | 528 | WP_048659789.1 | Phospholipase D | VF |
| AM408_RS00370 () | 40128..40559 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| AM408_RS26310 () | 40691..40867 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| AM408_RS00375 () | 41039..42004 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| AM408_RS26720 () | 42456..42566 | + | 111 | Protein_48 | peptidase | - |
| AM408_RS00385 () | 42683..42871 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| AM408_RS00390 () | 42881..44080 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| AM408_RS00400 () | 44734..45594 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| AM408_RS00405 () | 45994..47199 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| AM408_RS00410 () | 47196..48161 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| AM408_RS26315 () | 48426..48681 | + | 256 | Protein_54 | IS6 family transposase IS15 | Transposase |
| AM408_RS00420 () | 48662..49366 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM408_RS00425 () | 49436..49681 | - | 246 | Protein_56 | IS3 family transposase ISEhe3 | Transposase |
| AM408_RS00430 () | 49701..50135 | + | 435 | Protein_57 | GNAT family N-acetyltransferase | - |
| AM408_RS00435 () | 50260..50957 | - | 698 | Protein_58 | IS1 family transposase | - |
| AM408_RS00445 () | 51262..52266 | + | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
| AM408_RS00450 () | 52556..52834 | + | 279 | Protein_60 | IS3 family transposase | - |
| AM408_RS00455 () | 52942..54987 | - | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| AM408_RS00460 () | 55049..57706 | - | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| AM408_RS00465 () | 57706..61335 | - | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| AM408_RS00470 () | 61351..63114 | - | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| AM408_RS00475 () | 63131..66808 | - | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| AM408_RS00480 () | 66827..67411 | - | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| AM408_RS00485 () | 67408..68007 | - | 600 | WP_001021938.1 | DUF1819 family protein | - |
| AM408_RS00490 () | 68017..68943 | - | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| AM408_RS26320 () | 69012..69329 | - | 318 | WP_032156934.1 | hypothetical protein | - |
| AM408_RS26325 () | 69553..69732 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| AM408_RS00500 () | 69764..70375 | - | 612 | Protein_71 | IS3 family transposase ISRaq1 | Transposase |
| AM408_RS00515 () | 71122..71391 | + | 270 | WP_021546940.1 | hypothetical protein | Antitoxin Detail |
| AM408_RS00520 () | 71388..71669 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM408_RS00525 () | 71715..71927 | + | 213 | Protein_74 | 3'-5' exonuclease | - |
| AM408_RS00530 () | 72001..72210 | + | 210 | Protein_75 | transposase | - |
| AM408_RS00535 () | 72511..74061 | - | 1551 | Protein_76 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM408_RS00545 () | 74116..74820 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| AM408_RS00550 () | 75166..75975 | + | 810 | WP_000161640.1 | hypothetical protein | - |
| AM408_RS00555 () | 76072..76674 | - | 603 | WP_001752951.1 | IS91 family transposase ISMno24 | Transposase |
| AM408_RS00560 () | 76815..78245 | - | 1431 | WP_001460374.1 | hypothetical protein | - |
| AM408_RS00570 () | 78862..80139 | - | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| AM408_RS00580 () | 80203..82200 | - | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| AM408_RS00590 () | 82581..82820 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| AM408_RS00595 () | 82820..82981 | + | 162 | Protein_84 | type II toxin-antitoxin system mRNA interferase RelE | - |
| AM408_RS00600 () | 83071..83661 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| AM408_RS00605 () | 83798..84370 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| AM408_RS00610 () | 84407..85798 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| AM408_RS00615 () | 85831..86259 | + | 429 | Protein_88 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| AM408_RS00620 () | 86578..87234 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| AM408_RS00625 () | 87629..88644 | + | 1016 | Protein_90 | IS3 family transposase ISEc36 | Transposase |
| AM408_RS00630 () | 88687..91482 | - | 2796 | Protein_91 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM408_RS00635 () | 91496..91828 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AM408_RS00640 () | 91875..92750 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AM408_RS00645 () | 93006..94268 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| AM408_RS00650 () | 94474..94668 | - | 195 | Protein_95 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM408_RS00655 () | 94832..95389 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|