MGE detailed information
MGE type: Prophage MGE length: 44536 bp
Accession: NZ_CP021659 Location: 2116091..2160626 Organism: Candidatus Fukatsuia symbiotica strain 5D Replicon: chromosome
Accession: NZ_CP021659 Location: 2116091..2160626 Organism: Candidatus Fukatsuia symbiotica strain 5D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCS41_RS10110 () | 2111613..2112689 | + | 1077 | WP_119797757.1 | porin | - |
| CCS41_RS10115 () | 2112917..2114128 | + | 1212 | WP_072550900.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| CCS41_RS10120 () | 2114159..2114719 | + | 561 | WP_072550899.1 | conjugative transfer signal peptidase TraF | - |
| CCS41_RS10130 () | 2115019..2116041 | - | 1023 | WP_119797534.1 | IS630 family transposase | - |
| CCS41_RS10135 () | 2116097..2116819 | - | 723 | Protein_1968 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CCS41_RS10140 () | 2117011..2117349 | - | 339 | WP_119797535.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CCS41_RS10145 () | 2117336..2117710 | - | 375 | WP_119797536.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCS41_RS10150 () | 2118138..2118473 | - | 336 | WP_119797537.1 | helix-turn-helix domain-containing protein | - |
| CCS41_RS10155 () | 2118556..2118771 | + | 216 | WP_119797538.1 | hypothetical protein | - |
| CCS41_RS10160 () | 2118759..2118961 | + | 203 | Protein_1973 | DNA-binding protein | - |
| CCS41_RS10165 () | 2118969..2119148 | + | 180 | Protein_1974 | hypothetical protein | - |
| CCS41_RS10175 () | 2119956..2120243 | + | 288 | WP_162860102.1 | DUF2724 domain-containing protein | - |
| CCS41_RS10180 () | 2120185..2120532 | + | 348 | WP_119797054.1 | DUF5347 family protein | - |
| CCS41_RS10185 () | 2121014..2123077 | + | 2064 | WP_119797540.1 | replication endonuclease | - |
| CCS41_RS10190 () | 2123252..2123530 | + | 279 | WP_119797541.1 | type II toxin-antitoxin system HicA family toxin | - |
| CCS41_RS10195 () | 2123560..2123891 | + | 332 | Protein_1979 | type II toxin-antitoxin system HicB family antitoxin | - |
| CCS41_RS10200 () | 2124298..2124846 | + | 549 | WP_119797542.1 | hypothetical protein | - |
| CCS41_RS10205 () | 2125205..2126209 | - | 1005 | WP_119797543.1 | phage portal protein | - |
| CCS41_RS10210 () | 2126209..2128002 | - | 1794 | WP_119797049.1 | terminase family protein | - |
| CCS41_RS10215 () | 2128168..2128983 | + | 816 | WP_119797544.1 | GPO family capsid scaffolding protein | - |
| CCS41_RS10220 () | 2128985..2130073 | + | 1089 | WP_119797545.1 | phage major capsid protein, P2 family | - |
| CCS41_RS10225 () | 2129961..2130563 | + | 603 | WP_119797546.1 | hypothetical protein | - |
| CCS41_RS10230 () | 2130752..2131231 | + | 480 | WP_119797547.1 | head completion/stabilization protein | - |
| CCS41_RS10235 () | 2131330..2131533 | + | 204 | WP_119797044.1 | tail protein X | - |
| CCS41_RS10240 () | 2131552..2131803 | + | 252 | WP_119797043.1 | hypothetical protein | - |
| CCS41_RS10245 () | 2131787..2132305 | + | 519 | WP_119797042.1 | lysozyme | - |
| CCS41_RS10250 () | 2132298..2132768 | + | 471 | WP_119797041.1 | lysis protein | - |
| CCS41_RS10255 () | 2132775..2133240 | + | 466 | Protein_1991 | phage tail protein | - |
| CCS41_RS10260 () | 2133237..2133683 | + | 447 | WP_119797758.1 | phage virion morphogenesis protein | - |
| CCS41_RS10265 () | 2133703..2133987 | - | 285 | WP_119797548.1 | helix-turn-helix transcriptional regulator | - |
| CCS41_RS10270 () | 2133984..2134298 | - | 315 | WP_119797549.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCS41_RS15705 () | 2134476..2134646 | + | 171 | WP_162860056.1 | phage baseplate assembly protein V | - |
| CCS41_RS10275 () | 2134659..2135069 | + | 411 | WP_162860057.1 | phage baseplate assembly protein V | - |
| CCS41_RS10280 () | 2135066..2135413 | + | 348 | WP_119797550.1 | GPW/gp25 family protein | - |
| CCS41_RS10285 () | 2135413..2136321 | + | 909 | WP_119797551.1 | baseplate assembly protein | - |
| CCS41_RS10290 () | 2136537..2136722 | + | 186 | Protein_1999 | IS5 family transposase ISCaa2 | Transposase |
| CCS41_RS10295 () | 2136734..2137749 | - | 1016 | Protein_2000 | IS630 family transposase | - |
| CCS41_RS10300 () | 2137800..2138117 | + | 318 | Protein_2001 | IS5 family transposase ISFw1 | Transposase |
| CCS41_RS10305 () | 2138233..2138433 | + | 201 | WP_119797759.1 | tail fiber assembly protein | - |
| CCS41_RS10310 () | 2138715..2140265 | + | 1551 | WP_119797552.1 | hypothetical protein | - |
| CCS41_RS10315 () | 2140343..2140771 | - | 429 | WP_119797553.1 | hypothetical protein | - |
| CCS41_RS10320 () | 2140786..2141517 | - | 732 | WP_119797554.1 | hypothetical protein | - |
| CCS41_RS10325 () | 2141774..2142877 | + | 1104 | WP_119797760.1 | ISAs1 family transposase ISAcr3 | Transposase |
| CCS41_RS10330 () | 2142890..2143450 | + | 561 | WP_119797555.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CCS41_RS10335 () | 2143548..2144717 | + | 1170 | Protein_2008 | phage tail sheath protein | - |
| CCS41_RS10340 () | 2144729..2145244 | + | 516 | WP_119797556.1 | phage major tail tube protein | - |
| CCS41_RS10345 () | 2145406..2145756 | + | 351 | WP_119797557.1 | phage tail assembly protein | - |
| CCS41_RS10350 () | 2145771..2145890 | + | 120 | WP_119797558.1 | GpE family phage tail protein | - |
| CCS41_RS10355 () | 2145883..2148654 | + | 2772 | WP_119797559.1 | phage tail tape measure protein | - |
| CCS41_RS10360 () | 2148740..2149504 | - | 765 | WP_119797560.1 | IS481 family transposase ISFw3 | Transposase |
| CCS41_RS10365 () | 2149501..2150460 | - | 960 | WP_162859989.1 | IS110 family transposase ISStma4 | Transposase |
| CCS41_RS10370 () | 2150848..2151261 | - | 414 | WP_119797561.1 | ribonuclease E inhibitor RraB | - |
| CCS41_RS10405 () | 2157232..2158821 | + | 1590 | WP_083429588.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| CCS41_RS10410 () | 2158871..2160163 | + | 1293 | WP_072550071.1 | Phosphoribosylamine--glycine ligase | VF |
| CCS41_RS10415 () | 2160252..2160626 | - | 375 | WP_072550072.1 | HU family DNA-binding protein | - |
| CCS41_RS10420 () | 2160812..2161402 | - | 591 | WP_072550073.1 | DUF416 family protein | - |
| CCS41_RS10425 () | 2161498..2162616 | - | 1119 | WP_072550074.1 | uroporphyrinogen decarboxylase | - |
| CCS41_RS10430 () | 2162944..2163441 | + | 498 | WP_072550075.1 | Rsd/AlgQ family anti-sigma factor | - |
| CCS41_RS10435 () | 2163664..2165613 | + | 1950 | WP_083429589.1 | phosphomethylpyrimidine synthase ThiC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|