MGE detailed information
MGE type: Conjugative plasmid MGE length: 79174 bp
Accession: NZ_CP021650 Location: 1..79174 Organism: Acidovorax sp. T1 Replicon: plasmid p2-T1
Accession: NZ_CP021650 Location: 1..79174 Organism: Acidovorax sp. T1 Replicon: plasmid p2-T1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCX87_RS19835 () | 242..4588 | - | 4347 | WP_011117147.1 | DUF1738 domain-containing protein | - |
| CCX87_RS19840 () | 4592..4981 | - | 390 | WP_006122510.1 | protein TraD | - |
| CCX87_RS19845 () | 5003..7066 | - | 2064 | WP_011114056.1 | DNA topoisomerase III | - |
| CCX87_RS19850 () | 7078..7614 | - | 537 | WP_006122512.1 | conjugative transfer signal peptidase TraF | - |
| CCX87_RS19855 () | 7611..9524 | - | 1914 | WP_000694765.1 | Conjugal transfer protein TraG | VF |
| CCX87_RS19860 () | 9521..11761 | - | 2241 | WP_011117146.1 | Protein TraI | Relaxase |
| CCX87_RS19865 () | 11796..12170 | - | 375 | WP_000426567.1 | conjugal transfer transcriptional regulator TraJ | - |
| CCX87_RS19870 () | 12544..12942 | + | 399 | WP_001127128.1 | TraK family protein | - |
| CCX87_RS19875 () | 12942..13667 | + | 726 | WP_001062597.1 | protein TraL | - |
| CCX87_RS19880 () | 13667..14107 | + | 441 | WP_000718516.1 | conjugal transfer protein TraM | - |
| CCX87_RS19885 () | 14310..14963 | - | 654 | WP_000826922.1 | hypothetical protein | - |
| CCX87_RS19890 () | 14992..15339 | - | 348 | WP_000664557.1 | hypothetical protein | - |
| CCX87_RS19895 () | 15510..16541 | - | 1032 | WP_011117145.1 | DNA-binding protein | - |
| CCX87_RS19900 () | 16721..17770 | - | 1050 | WP_011114060.1 | ParB/RepB/Spo0J family partition protein | - |
| CCX87_RS19905 () | 17767..18531 | - | 765 | WP_000855329.1 | ParA family protein | - |
| CCX87_RS19910 () | 18528..18830 | - | 303 | WP_010890110.1 | transcriptional regulator KorA | - |
| CCX87_RS19915 () | 18944..19474 | - | 531 | WP_011117143.1 | DUF2761 domain-containing protein | - |
| CCX87_RS19920 () | 19476..19805 | - | 330 | WP_010890113.1 | protein KleE | - |
| CCX87_RS19925 () | 19950..20165 | - | 216 | WP_010890114.1 | DUF2688 domain-containing protein | - |
| CCX87_RS19930 () | 20224..20460 | - | 237 | WP_000041932.1 | stable inheritance protein KleA | - |
| CCX87_RS19935 () | 20620..20877 | - | 258 | WP_011117141.1 | transcriptional repressor KorC | - |
| CCX87_RS19940 () | 20894..22099 | - | 1206 | WP_011405605.1 | protein KlcB | - |
| CCX87_RS19945 () | 22151..22579 | - | 429 | WP_001095942.1 | antirestriction protein | - |
| CCX87_RS19950 () | 22748..23017 | + | 270 | WP_001260984.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CCX87_RS19955 () | 23014..23328 | + | 315 | WP_011117139.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCX87_RS19970 () | 24651..25871 | - | 1221 | WP_011114072.1 | replication initiator protein A | - |
| CCX87_RS19975 () | 25918..26259 | - | 342 | WP_000019167.1 | single-stranded DNA-binding protein | - |
| CCX87_RS19980 () | 26373..26735 | + | 363 | WP_010890126.1 | transcriptional regulator | - |
| CCX87_RS19985 () | 27045..28007 | + | 963 | WP_000132020.1 | Type IV secretion system protein PtlH | VF |
| CCX87_RS19990 () | 28024..28488 | + | 465 | WP_011114046.1 | conjugal transfer system pilin TrbC | - |
| CCX87_RS19995 () | 28492..28803 | + | 312 | WP_001207961.1 | conjugal transfer protein TrbD | - |
| CCX87_RS20000 () | 28800..31358 | + | 2559 | WP_011114047.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| CCX87_RS20005 () | 31355..32137 | + | 783 | WP_006122481.1 | conjugal transfer protein TrbF | - |
| CCX87_RS20010 () | 32155..33054 | + | 900 | WP_006122480.1 | P-type conjugative transfer protein TrbG | - |
| CCX87_RS20015 () | 33057..33545 | + | 489 | WP_006122479.1 | conjugal transfer protein TrbH | - |
| CCX87_RS20020 () | 33550..34971 | + | 1422 | WP_011114050.1 | Type IV secretion system protein virB10 | VF |
| CCX87_RS20025 () | 34992..35756 | + | 765 | WP_010890135.1 | P-type conjugative transfer protein TrbJ | - |
| CCX87_RS20030 () | 35766..35993 | + | 228 | WP_000644148.1 | entry exclusion lipoprotein TrbK | - |
| CCX87_RS20035 () | 36004..37722 | + | 1719 | WP_011114051.1 | P-type conjugative transfer protein TrbL | - |
| CCX87_RS20040 () | 37740..38327 | + | 588 | WP_010890138.1 | conjugal transfer protein TrbM | - |
| CCX87_RS20045 () | 38341..38976 | + | 636 | WP_011114052.1 | hypothetical protein | VF |
| CCX87_RS20050 () | 39005..39271 | + | 267 | WP_010890140.1 | hypothetical protein | - |
| CCX87_RS20055 () | 39271..39969 | + | 699 | WP_011114053.1 | conjugal transfer protein TraX | - |
| CCX87_RS20060 () | 39985..40416 | + | 432 | WP_001665065.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| CCX87_RS20065 () | 40571..41245 | + | 675 | WP_011178411.1 | DNA methylase | - |
| CCX87_RS20070 () | 41247..41906 | - | 660 | WP_011178412.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CCX87_RS20075 () | 42291..42506 | + | 216 | WP_021561443.1 | antitoxin MazE family protein | Antitoxin Detail |
| CCX87_RS20080 () | 42506..42826 | + | 321 | WP_021561444.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CCX87_RS20085 () | 43062..43625 | + | 564 | WP_021561445.1 | Tn3 family transposase ISPsy42 | Transposase |
| CCX87_RS20095 () | 43888..45080 | + | 1193 | WP_087748592.1 | IS3 family transposase ISCte2 | Transposase |
| CCX87_RS20100 () | 45137..45352 | + | 216 | WP_087748593.1 | hypothetical protein | - |
| CCX87_RS20105 () | 45357..46157 | - | 801 | WP_087748594.1 | phosphonate ABC transporter, permease protein PhnE | - |
| CCX87_RS20110 () | 46180..47127 | - | 948 | WP_087748595.1 | phosphonate ABC transporter substrate-binding protein | - |
| CCX87_RS20115 () | 47176..48045 | - | 870 | WP_087748596.1 | Phosphate-import ATP-binding protein PhnC | VF |
| CCX87_RS20120 () | 48090..48905 | - | 816 | WP_157667159.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CCX87_RS20125 () | 48934..49623 | - | 690 | WP_087748598.1 | Chloramphenicol acetyltransferase | VF |
| CCX87_RS20130 () | 49637..50839 | - | 1203 | WP_198314824.1 | alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase | - |
| CCX87_RS20135 () | 50836..51591 | - | 756 | WP_087748599.1 | phosphonate C-P lyase system protein PhnL | - |
| CCX87_RS20140 () | 51588..52379 | - | 792 | WP_087748600.1 | Putative phosphonates utilization ATP-binding protein PhnK | VF |
| CCX87_RS20145 () | 52376..52861 | - | 486 | WP_087748601.1 | GNAT family N-acetyltransferase | - |
| CCX87_RS20150 () | 52858..53772 | - | 915 | WP_087748602.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| CCX87_RS20155 () | 53769..54878 | - | 1110 | WP_087748603.1 | carbon-phosphorus lyase complex subunit PhnI | - |
| CCX87_RS20160 () | 54881..55528 | - | 648 | WP_087748604.1 | phosphonate C-P lyase system protein PhnH | - |
| CCX87_RS20165 () | 55525..56025 | - | 501 | WP_087748605.1 | phosphonate C-P lyase system protein PhnG | - |
| CCX87_RS20170 () | 56101..56862 | + | 762 | WP_087748606.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| CCX87_RS20175 () | 56852..57589 | + | 738 | WP_087748607.1 | DUF1045 domain-containing protein | - |
| CCX87_RS20180 () | 57586..58179 | + | 594 | WP_087748608.1 | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | - |
| CCX87_RS20185 () | 58205..59572 | + | 1368 | WP_087748609.1 | chromate efflux transporter | - |
| CCX87_RS20190 () | 59593..60432 | - | 840 | WP_087748610.1 | IclR family transcriptional regulator | - |
| CCX87_RS20195 () | 60584..61543 | + | 960 | WP_087748611.1 | MBL fold metallo-hydrolase | - |
| CCX87_RS20200 () | 61672..62220 | + | 549 | WP_087748612.1 | VOC family protein | - |
| CCX87_RS20205 () | 62248..63033 | + | 786 | WP_087748613.1 | FAD-dependent monooxygenase | - |
| CCX87_RS20210 () | 63214..64581 | - | 1368 | Protein_72 | IS91 family transposase ISPps1 | Transposase |
| CCX87_RS20215 () | 64509..65222 | - | 714 | WP_087748614.1 | twin-arginine translocation signal domain-containing protein | - |
| CCX87_RS20220 () | 65774..67087 | - | 1314 | WP_087748615.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| CCX87_RS20225 () | 67238..67861 | - | 624 | WP_087748616.1 | Periplasmic zinc-binding protein TroA | VF |
| CCX87_RS20230 () | 68037..68999 | - | 963 | Protein_76 | IS91 family transposase ISPps1 | Transposase |
| CCX87_RS20235 () | 70245..70535 | - | 291 | WP_087748617.1 | hypothetical protein | - |
| CCX87_RS20240 () | 70750..71703 | + | 954 | WP_087748618.1 | Carboxyvinyl-carboxyphosphonate phosphorylmutase | VF |
| CCX87_RS20245 () | 71736..72986 | + | 1251 | WP_087748619.1 | FAD-binding oxidoreductase | - |
| CCX87_RS20250 () | 72989..73636 | + | 648 | WP_087748620.1 | hypothetical protein | - |
| CCX87_RS20255 () | 73817..75364 | - | 1548 | WP_008328818.1 | IS91 family transposase ISPps1 | Transposase |
| CCX87_RS20260 () | 75473..76066 | - | 594 | Protein_82 | FAD-dependent oxidoreductase | - |
| CCX87_RS20265 () | 76210..79125 | - | 2916 | WP_087743256.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|