MGE detailed information
MGE type: Prophage MGE length: 41462 bp
Accession: NZ_CP021644 Location: 586516..627977 Organism: Glaesserella parasuis 29755 Replicon: chromosome
Accession: NZ_CP021644 Location: 586516..627977 Organism: Glaesserella parasuis 29755 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4U42_RS03045 () | 582782..583873 | + | 1092 | WP_005712138.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| B4U42_RS03050 () | 583875..584519 | + | 645 | WP_005712141.1 | riboflavin synthase | - |
| B4U42_RS03055 () | 584651..585850 | + | 1200 | WP_005712143.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| B4U42_RS03060 () | 585943..586404 | + | 462 | WP_005712146.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| B4U42_RS03065 () | 586516..587307 | - | 792 | WP_005712148.1 | ABC transporter ATP-binding protein YxdL | VF |
| B4U42_RS03070 () | 587307..588242 | - | 936 | WP_005712151.1 | ABC transporter permease | - |
| B4U42_RS03075 () | 588435..588653 | + | 219 | WP_005712153.1 | YgjV family protein | - |
| B4U42_RS12340 () | 588767..588907 | - | 141 | WP_005712155.1 | hypothetical protein | - |
| B4U42_RS03080 () | 588932..590353 | - | 1422 | WP_005712157.1 | membrane-bound lytic murein transglycosylase MltF | - |
| B4U42_RS03085 () | 590481..591335 | - | 855 | WP_005712159.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| B4U42_RS03100 () | 591741..592796 | - | 1056 | WP_005712160.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B4U42_RS03105 () | 592700..593006 | - | 307 | Protein_566 | helix-turn-helix domain-containing protein | - |
| B4U42_RS03110 () | 593096..593899 | - | 804 | WP_005712164.1 | hypothetical protein | - |
| B4U42_RS03115 () | 594351..594731 | - | 381 | WP_005712166.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| B4U42_RS03120 () | 595097..595309 | + | 213 | WP_005712169.1 | hypothetical protein | - |
| B4U42_RS03125 () | 595328..595591 | - | 264 | WP_005712171.1 | hypothetical protein | - |
| B4U42_RS03130 () | 595615..596280 | - | 666 | WP_005714394.1 | hypothetical protein | - |
| B4U42_RS03135 () | 596627..596815 | + | 189 | WP_012621814.1 | hypothetical protein | - |
| B4U42_RS03140 () | 596857..597470 | - | 614 | Protein_573 | YqaJ viral recombinase family protein | - |
| B4U42_RS03145 () | 597467..598333 | - | 867 | WP_005714753.1 | phage recombination protein Bet | - |
| B4U42_RS12345 () | 598343..598969 | - | 627 | WP_204355918.1 | hypothetical protein | - |
| B4U42_RS03155 () | 598976..599839 | - | 864 | WP_112065000.1 | IS256 family transposase IS1414 | Transposase |
| B4U42_RS03160 () | 599882..600265 | + | 384 | WP_035494815.1 | antitermination protein | - |
| B4U42_RS03165 () | 600287..600724 | - | 438 | WP_005714900.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| B4U42_RS03170 () | 600754..600939 | - | 186 | WP_005714898.1 | type II toxin-antitoxin system HicA family toxin | - |
| B4U42_RS03175 () | 601180..601455 | + | 276 | WP_016527880.1 | hypothetical protein | - |
| B4U42_RS03180 () | 601430..601975 | + | 546 | WP_040978467.1 | lysozyme | - |
| B4U42_RS03185 () | 601948..602292 | + | 345 | WP_040978465.1 | DUF2570 family protein | - |
| B4U42_RS12350 () | 602186..602470 | + | 285 | WP_204355919.1 | hypothetical protein | - |
| B4U42_RS03200 () | 602786..603253 | + | 468 | WP_005714379.1 | DUF1441 family protein | - |
| B4U42_RS03205 () | 603253..605373 | + | 2121 | WP_005714376.1 | phage terminase large subunit family protein | - |
| B4U42_RS03210 () | 605391..605612 | + | 222 | WP_005714374.1 | hypothetical protein | - |
| B4U42_RS03215 () | 605613..607112 | + | 1500 | WP_005714372.1 | phage portal protein | - |
| B4U42_RS03220 () | 607138..609105 | + | 1968 | WP_005714371.1 | ATP-dependent Clp protease proteolytic subunit 1 | VF |
| B4U42_RS03225 () | 609337..610323 | + | 987 | WP_005714908.1 | IS110 family transposase ISCro4 | Transposase |
| B4U42_RS03230 () | 610381..610707 | + | 327 | WP_005714561.1 | DUF2190 family protein | - |
| B4U42_RS03235 () | 610700..611005 | + | 306 | WP_005714563.1 | phage tail protein | - |
| B4U42_RS03240 () | 611009..611542 | + | 534 | WP_005714565.1 | phage tail protein | - |
| B4U42_RS03245 () | 611542..611961 | + | 420 | WP_005714567.1 | phage tail protein | - |
| B4U42_RS03250 () | 611964..612629 | + | 666 | WP_005714568.1 | hypothetical protein | - |
| B4U42_RS03255 () | 612703..613104 | + | 402 | WP_005714571.1 | hypothetical protein | - |
| B4U42_RS03260 () | 613149..613376 | + | 228 | WP_005714573.1 | DUF4035 domain-containing protein | - |
| B4U42_RS03265 () | 613446..613712 | + | 267 | WP_005714576.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| B4U42_RS03270 () | 613716..613985 | + | 270 | WP_005714578.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| B4U42_RS03275 () | 614131..615339 | - | 1209 | WP_016527735.1 | IS256 family transposase IS1414 | Transposase |
| B4U42_RS12235 () | 615443..615658 | + | 216 | WP_035498906.1 | hypothetical protein | - |
| B4U42_RS03280 () | 615861..616136 | + | 276 | WP_005714514.1 | hypothetical protein | VF |
| B4U42_RS03285 () | 616192..619566 | + | 3375 | WP_005714513.1 | phage tail tape measure protein | - |
| B4U42_RS03290 () | 619611..619943 | + | 333 | WP_020997028.1 | phage tail protein | - |
| B4U42_RS03295 () | 619943..620680 | + | 738 | WP_038513532.1 | phage minor tail protein L | - |
| B4U42_RS03300 () | 620760..621506 | + | 747 | WP_005713888.1 | hypothetical protein | - |
| B4U42_RS03305 () | 621506..621886 | + | 381 | WP_005713886.1 | hypothetical protein | - |
| B4U42_RS03310 () | 621930..622691 | + | 762 | WP_005713885.1 | C40 family peptidase | - |
| B4U42_RS03315 () | 622721..623233 | + | 513 | WP_020997070.1 | tail assembly protein | - |
| B4U42_RS03320 () | 623287..625764 | + | 2478 | Protein_609 | host specificity protein J | - |
| B4U42_RS03325 () | 626279..627157 | + | 879 | WP_020997072.1 | DUF1983 domain-containing protein | - |
| B4U42_RS03330 () | 627186..627977 | + | 792 | WP_005713882.1 | transferrin-binding protein-like solute binding protein | - |
| B4U42_RS03340 () | 628318..629274 | - | 957 | WP_005713881.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| B4U42_RS03345 () | 629412..630779 | - | 1368 | WP_005713879.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|