MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 19899 bp
Accession: NZ_CP021513 Location: 1..19899 Organism: Acetobacter pasteurianus subsp. Pasteurianus strain SRCM101342 Replicon: plasmid pAP1342-4
Accession: NZ_CP021513 Location: 1..19899 Organism: Acetobacter pasteurianus subsp. Pasteurianus strain SRCM101342 Replicon: plasmid pAP1342-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S1001342_RS15660 () | 1..423 | + | 423 | WP_064775896.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| S1001342_RS15665 () | 517..774 | - | 258 | WP_064775897.1 | conjugal transfer protein TraD | - |
| S1001342_RS15670 () | 839..1198 | - | 360 | WP_196767348.1 | conjugal transfer protein TraD | - |
| S1001342_RS15675 () | 1295..4381 | + | 3087 | WP_064775901.1 | Ti-type conjugative transfer relaxase TraA | - |
| S1001342_RS15680 () | 4447..4698 | + | 252 | WP_062144457.1 | hypothetical protein | Antitoxin Detail |
| S1001342_RS15685 () | 4695..5117 | + | 423 | WP_064775898.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| S1001342_RS15690 () | 5321..5788 | + | 468 | WP_081273878.1 | hypothetical protein | - |
| S1001342_RS15695 () | 5874..7613 | - | 1740 | WP_087652355.1 | Hint domain-containing protein | - |
| S1001342_RS15700 () | 7826..8422 | + | 597 | WP_064775890.1 | recombinase family protein | - |
| S1001342_RS15710 () | 9020..9517 | + | 498 | WP_081273877.1 | helix-turn-helix domain-containing protein | - |
| S1001342_RS15715 () | 9957..10592 | + | 636 | WP_064775891.1 | ParA family protein | - |
| S1001342_RS15720 () | 10589..10915 | + | 327 | WP_019089445.1 | hypothetical protein | - |
| S1001342_RS15725 () | 11153..11236 | - | 84 | Protein_13 | transposon DNA-invertase | - |
| S1001342_RS15730 () | 11330..12715 | + | 1386 | WP_087652356.1 | IS1380-like element IS1380A family transposase | - |
| S1001342_RS15735 () | 12858..13436 | - | 579 | WP_087652358.1 | recombinase family protein | - |
| S1001342_RS15740 () | 13562..16453 | + | 2892 | WP_087652357.1 | Tn3 family transposase | - |
| S1001342_RS15745 () | 16491..17051 | + | 561 | WP_064775892.1 | recombinase family protein | - |
| S1001342_RS15750 () | 17116..17445 | - | 330 | WP_064775893.1 | helix-turn-helix domain-containing protein | - |
| S1001342_RS15755 () | 17433..17711 | - | 279 | WP_062247727.1 | BrnT family toxin | - |
| S1001342_RS15760 () | 17888..18301 | - | 414 | WP_064775894.1 | IS200/IS605 family transposase | - |
| S1001342_RS15765 () | 18324..19544 | + | 1221 | WP_064775895.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|