MGE detailed information
MGE type: Prophage MGE length: 40830 bp
Accession: NZ_CP021448 Location: 622694..663523 Organism: Ralstonia solanacearum strain SEPPX05 Replicon: chromosome
Accession: NZ_CP021448 Location: 622694..663523 Organism: Ralstonia solanacearum strain SEPPX05 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RSSE_RS03060 () | 618362..619015 | - | 654 | WP_003267806.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
| RSSE_RS03065 () | 619045..620394 | - | 1350 | WP_011001651.1 | trigger factor | - |
| RSSE_RS03070 () | 620649..622622 | - | 1974 | WP_087451236.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| RSSE_RS03075 () | 622694..622888 | - | 195 | WP_011001649.1 | hypothetical protein | - |
| RSSE_RS27545 () | 623006..623305 | + | 300 | WP_157699108.1 | hypothetical protein | - |
| RSSE_RS03080 () | 623385..624422 | + | 1038 | WP_071623781.1 | LysM peptidoglycan-binding domain-containing protein | - |
| RSSE_RS03085 () | 624454..624756 | + | 303 | WP_071623782.1 | hypothetical protein | - |
| RSSE_RS03090 () | 625130..625951 | - | 822 | WP_087451183.1 | IS3 family transposase ISKpn40 | Transposase |
| RSSE_RS03095 () | 625948..626262 | - | 315 | WP_087452270.1 | IS3 family transposase ISKpn40 | Transposase |
| RSSE_RS27550 () | 626284..626742 | + | 459 | WP_157699109.1 | hypothetical protein | - |
| RSSE_RS03100 () | 626846..627391 | - | 546 | WP_087451237.1 | lysis protein | - |
| RSSE_RS03105 () | 627391..627666 | - | 276 | WP_087451238.1 | hypothetical protein | - |
| RSSE_RS03110 () | 627669..627977 | - | 309 | WP_011001642.1 | hypothetical protein | - |
| RSSE_RS03115 () | 627977..628468 | - | 492 | WP_087451239.1 | glycoside hydrolase family protein | - |
| RSSE_RS03120 () | 628537..629193 | - | 657 | WP_087451240.1 | hypothetical protein | - |
| RSSE_RS03130 () | 629530..632685 | - | 3156 | WP_087451241.1 | host specificity protein J | - |
| RSSE_RS03135 () | 632737..632991 | + | 255 | WP_087451242.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| RSSE_RS03140 () | 632988..633326 | + | 339 | WP_011001638.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| RSSE_RS03145 () | 633396..633998 | - | 603 | WP_087451243.1 | tail assembly protein | - |
| RSSE_RS03150 () | 634002..634712 | - | 711 | WP_087451244.1 | C40 family peptidase | - |
| RSSE_RS03155 () | 634714..635415 | - | 702 | WP_087451245.1 | phage minor tail protein L | - |
| RSSE_RS03160 () | 635412..636008 | - | 597 | WP_087451246.1 | tail fiber assembly protein | - |
| RSSE_RS03165 () | 636014..636691 | - | 678 | WP_087451247.1 | phage tail protein | - |
| RSSE_RS03170 () | 636688..637026 | - | 339 | WP_087451248.1 | phage tail protein | - |
| RSSE_RS03175 () | 637029..639902 | - | 2874 | WP_087451249.1 | phage tail tape measure protein | - |
| RSSE_RS03180 () | 639904..640164 | - | 261 | WP_087451250.1 | DUF1799 domain-containing protein | - |
| RSSE_RS03185 () | 640212..640532 | - | 321 | WP_071623762.1 | hypothetical protein | - |
| RSSE_RS03190 () | 640538..641191 | - | 654 | WP_078222085.1 | phage tail protein | - |
| RSSE_RS03195 () | 641255..641608 | - | 354 | WP_087451251.1 | DUF3168 domain-containing protein | - |
| RSSE_RS03200 () | 641598..642101 | - | 504 | WP_087451252.1 | hypothetical protein | - |
| RSSE_RS03205 () | 642104..642430 | - | 327 | WP_087451253.1 | phage head closure protein | - |
| RSSE_RS03210 () | 642438..642761 | - | 324 | WP_078222088.1 | head-tail connector protein | - |
| RSSE_RS03215 () | 642794..644032 | - | 1239 | WP_011001625.1 | phage major capsid protein | - |
| RSSE_RS03220 () | 644043..644654 | - | 612 | WP_028853138.1 | HK97 family phage prohead protease | - |
| RSSE_RS03225 () | 644662..645885 | - | 1224 | WP_087451254.1 | phage portal protein | - |
| RSSE_RS28080 () | 645882..646040 | - | 159 | WP_011001622.1 | hypothetical protein | - |
| RSSE_RS03230 () | 646043..647713 | - | 1671 | WP_087451255.1 | terminase large subunit | - |
| RSSE_RS03235 () | 647758..648099 | - | 342 | WP_049832880.1 | hypothetical protein | - |
| RSSE_RS03240 () | 648524..648898 | - | 375 | WP_011001621.1 | HNH endonuclease | - |
| RSSE_RS03245 () | 649082..649684 | - | 603 | WP_087451256.1 | hypothetical protein | - |
| RSSE_RS03250 () | 649708..650004 | - | 297 | WP_071091218.1 | hypothetical protein | - |
| RSSE_RS03255 () | 650001..651035 | - | 1035 | WP_087451257.1 | hypothetical protein | - |
| RSSE_RS03260 () | 651032..651229 | - | 198 | WP_011001618.1 | hypothetical protein | - |
| RSSE_RS03265 () | 651238..651648 | - | 411 | WP_087451258.1 | hypothetical protein | - |
| RSSE_RS03270 () | 651645..652148 | - | 504 | WP_028853127.1 | hypothetical protein | - |
| RSSE_RS03275 () | 652705..653229 | + | 525 | WP_078222094.1 | helix-turn-helix domain-containing protein | - |
| RSSE_RS03280 () | 653512..654132 | + | 621 | WP_049832879.1 | hypothetical protein | - |
| RSSE_RS03285 () | 654826..655200 | + | 375 | WP_087451259.1 | hypothetical protein | - |
| RSSE_RS03290 () | 655197..655634 | + | 438 | WP_028853124.1 | hypothetical protein | - |
| RSSE_RS28085 () | 655631..655783 | + | 153 | WP_197346123.1 | hypothetical protein | - |
| RSSE_RS03295 () | 655789..656004 | + | 216 | WP_087452282.1 | hypothetical protein | - |
| RSSE_RS03300 () | 656014..656445 | + | 432 | WP_071623745.1 | hypothetical protein | - |
| RSSE_RS03305 () | 656442..656678 | + | 237 | WP_087451260.1 | hypothetical protein | - |
| RSSE_RS03310 () | 656704..657294 | + | 591 | WP_087451261.1 | PRTRC system protein E | - |
| RSSE_RS03315 () | 657307..657705 | + | 399 | WP_087452283.1 | PRTRC system protein C | - |
| RSSE_RS03320 () | 657702..658742 | + | 1041 | WP_087451262.1 | PRTRC system protein F | - |
| RSSE_RS03325 () | 658750..659472 | + | 723 | WP_087451263.1 | PRTRC system protein B | - |
| RSSE_RS03330 () | 659474..660259 | + | 786 | WP_087451264.1 | PRTRC system protein A | - |
| RSSE_RS03335 () | 660256..661056 | + | 801 | WP_087451265.1 | PRTRC system ThiF family protein | - |
| RSSE_RS03340 () | 661058..662536 | + | 1479 | WP_087451266.1 | hypothetical protein | - |
| RSSE_RS03345 () | 662591..662899 | + | 309 | WP_071623736.1 | hypothetical protein | - |
| RSSE_RS03350 () | 662900..663694 | - | 795 | Protein_650 | hypothetical protein ; Integrase | Integrase |
| RSSE_RS27555 () | 664556..664771 | - | 216 | Protein_652 | site-specific integrase | - |
| RSSE_RS03365 () | 665161..668280 | - | 3120 | WP_019718736.1 | efflux RND transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|