MGE detailed information
MGE type: Genomic_island MGE length: 40051 bp
Accession: NZ_CP021394 Location: 1308610..1348660 Organism: Bifidobacterium breve strain NRBB56 Replicon: chromosome
Accession: NZ_CP021394 Location: 1308610..1348660 Organism: Bifidobacterium breve strain NRBB56 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB56_RS05825 () | 1303810..1304631 | - | 822 | WP_106630473.1 | DUF881 domain-containing protein | - |
| NRBB56_RS05830 () | 1304633..1304965 | - | 333 | WP_003829384.1 | small basic family protein | - |
| NRBB56_RS05835 () | 1304965..1305942 | - | 978 | WP_106630474.1 | DUF881 domain-containing protein | - |
| NRBB56_RS05840 () | 1305932..1306549 | - | 618 | WP_015438818.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| NRBB56_RS05845 () | 1306572..1307423 | - | 852 | WP_003831818.1 | ATP phosphoribosyltransferase | - |
| NRBB56_RS05850 () | 1307549..1307812 | - | 264 | WP_003829389.1 | phosphoribosyl-ATP diphosphatase | - |
| NRBB56_RS05855 () | 1307862..1308530 | - | 669 | WP_003831817.1 | ribulose-phosphate 3-epimerase | - |
| NRBB56_RS05860 () | 1308610..1309560 | - | 951 | WP_025221712.1 | prolipoprotein diacylglyceryl transferase | - |
| NRBB56_RS05865 () | 1309795..1310664 | - | 870 | WP_007054259.1 | tryptophan synthase subunit alpha | - |
| NRBB56_RS05870 () | 1310687..1312774 | - | 2088 | WP_042994081.1 | bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta | - |
| NRBB56_RS05875 () | 1312975..1313667 | + | 693 | WP_003829395.1 | SOS response-associated peptidase | - |
| NRBB56_RS05880 () | 1313797..1314651 | - | 855 | WP_106622623.1 | deoxyribonuclease IV | - |
| NRBB56_RS05885 () | 1314784..1316184 | + | 1401 | WP_003829397.1 | amino acid permease | - |
| NRBB56_RS05890 () | 1316663..1316824 | + | 162 | Protein_1096 | MFS transporter | - |
| NRBB56_RS05895 () | 1317008..1318021 | - | 1014 | WP_014483716.1 | VanZ family protein | - |
| NRBB56_RS05900 () | 1318168..1318992 | + | 825 | WP_065507047.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRBB56_RS05905 () | 1319061..1319360 | + | 300 | WP_016462931.1 | DUF2316 family protein | - |
| NRBB56_RS05910 () | 1319401..1319934 | - | 534 | WP_106630475.1 | GNAT family N-acetyltransferase | - |
| NRBB56_RS05915 () | 1320068..1320397 | - | 330 | WP_016462930.1 | hypothetical protein | - |
| NRBB56_RS05930 () | 1320807..1321613 | - | 807 | WP_011068121.1 | Abi family protein | - |
| NRBB56_RS11060 () | 1321776..1322030 | - | 255 | WP_003829406.1 | hypothetical protein | - |
| NRBB56_RS11065 () | 1322999..1323139 | + | 141 | WP_007056287.1 | hypothetical protein | - |
| NRBB56_RS05955 () | 1323540..1324613 | - | 1074 | WP_032738189.1 | histidine kinase | - |
| NRBB56_RS05960 () | 1324679..1325375 | - | 697 | Protein_1106 | response regulator transcription factor | - |
| NRBB56_RS05965 () | 1325501..1326016 | + | 516 | WP_065452570.1 | hypothetical protein | - |
| NRBB56_RS05970 () | 1326013..1326903 | + | 891 | WP_003831809.1 | hypothetical protein | - |
| NRBB56_RS05975 () | 1326900..1327580 | + | 681 | WP_106630477.1 | hypothetical protein | VF |
| NRBB56_RS05980 () | 1327577..1328746 | + | 1170 | WP_106630478.1 | ABC transporter permease | - |
| NRBB56_RS05985 () | 1328931..1329200 | + | 270 | WP_025221722.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB56_RS05990 () | 1329204..1329497 | + | 294 | WP_003831807.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| NRBB56_RS06000 () | 1330166..1330744 | + | 579 | WP_106630760.1 | hypothetical protein | VF |
| NRBB56_RS06005 () | 1330751..1331578 | + | 828 | WP_106630479.1 | hypothetical protein | - |
| NRBB56_RS06010 () | 1331711..1332337 | + | 627 | WP_106630480.1 | hypothetical protein | - |
| NRBB56_RS06015 () | 1332334..1333116 | + | 783 | WP_106630481.1 | murein hydrolase transporter LrgB | - |
| NRBB56_RS06020 () | 1333168..1334043 | + | 876 | WP_106630482.1 | hypothetical protein | VF |
| NRBB56_RS06025 () | 1334098..1334496 | + | 399 | WP_015438839.1 | hypothetical protein | - |
| NRBB56_RS06030 () | 1334591..1334953 | - | 363 | WP_015438840.1 | hypothetical protein | - |
| NRBB56_RS06035 () | 1335077..1335952 | - | 876 | WP_014484916.1 | EamA family transporter | - |
| NRBB56_RS06040 () | 1336156..1336779 | - | 624 | WP_025262995.1 | hypothetical protein | - |
| NRBB56_RS06045 () | 1336776..1337504 | - | 729 | WP_012577741.1 | hypothetical protein | - |
| NRBB56_RS06050 () | 1337509..1338165 | - | 657 | WP_025262996.1 | ATP-binding cassette domain-containing protein | - |
| NRBB56_RS06055 () | 1338499..1339732 | + | 1234 | Protein_1124 | IS30 family transposase ISBlo4 | Transposase |
| NRBB56_RS06060 () | 1339924..1340592 | - | 669 | WP_003829435.1 | response regulator transcription factor | - |
| NRBB56_RS06065 () | 1340589..1341818 | - | 1230 | WP_106630483.1 | two-component sensor histidine kinase | - |
| NRBB56_RS06070 () | 1341851..1343275 | - | 1425 | WP_003829437.1 | FtsX-like permease family protein | - |
| NRBB56_RS06075 () | 1343268..1344170 | - | 903 | WP_106630484.1 | hypothetical protein | VF |
| NRBB56_RS06080 () | 1344365..1344898 | - | 534 | WP_012577746.1 | hypothetical protein | - |
| NRBB56_RS06085 () | 1345230..1345532 | + | 303 | WP_003829440.1 | DUF2089 family protein | - |
| NRBB56_RS06090 () | 1345535..1345879 | + | 345 | WP_003829441.1 | hypothetical protein | - |
| NRBB56_RS06095 () | 1346020..1346433 | - | 414 | WP_003829442.1 | hypothetical protein | - |
| NRBB56_RS06100 () | 1346855..1347496 | + | 642 | WP_003829444.1 | hypothetical protein | - |
| NRBB56_RS06105 () | 1347589..1347882 | + | 294 | WP_012471870.1 | hypothetical protein | - |
| NRBB56_RS06110 () | 1347906..1348361 | + | 456 | WP_021649855.1 | HipA N-terminal domain-containing protein | - |
| NRBB56_RS06115 () | 1348529..1348641 | + | 113 | Protein_1136 | permease | - |
| NRBB56_RS06120 () | 1348676..1349319 | + | 644 | Protein_1137 | MFS transporter | - |
| NRBB56_RS06125 () | 1349643..1351223 | + | 1581 | WP_025262999.1 | amino acid permease | - |
| NRBB56_RS06130 () | 1351466..1351705 | - | 240 | WP_003829454.1 | hypothetical protein | - |
| NRBB56_RS06135 () | 1352002..1352355 | + | 354 | WP_014483707.1 | DUF488 domain-containing protein | - |
| NRBB56_RS11070 () | 1352421..1352849 | - | 429 | WP_015438848.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|