MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33578 bp
Accession: NZ_CP021394 Location: 1041071..1074648 Organism: Bifidobacterium breve strain NRBB56 Replicon: chromosome
Accession: NZ_CP021394 Location: 1041071..1074648 Organism: Bifidobacterium breve strain NRBB56 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB56_RS04520 () | 1036471..1037787 | + | 1317 | WP_014483857.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| NRBB56_RS04525 () | 1038262..1039188 | + | 927 | WP_016463158.1 | ABC transporter ATP-binding protein | - |
| NRBB56_RS04530 () | 1039220..1041958 | + | 2739 | WP_106630391.1 | ABC transporter permease | - |
| NRBB56_RS04535 () | 1042247..1043053 | - | 807 | WP_015438699.1 | response regulator transcription factor | - |
| NRBB56_RS04540 () | 1043075..1045543 | - | 2469 | WP_106630392.1 | histidine kinase | - |
| NRBB56_RS04545 () | 1045625..1047103 | + | 1479 | WP_014483852.1 | alpha/beta fold hydrolase | - |
| NRBB56_RS04550 () | 1047250..1048071 | + | 822 | WP_003829067.1 | pyrroline-5-carboxylate reductase | - |
| NRBB56_RS04555 () | 1048213..1049061 | - | 849 | WP_052828827.1 | transporter substrate-binding domain-containing protein | - |
| NRBB56_RS04560 () | 1049131..1049874 | - | 744 | WP_171842473.1 | hypothetical protein | VF |
| NRBB56_RS04565 () | 1049912..1050619 | - | 708 | WP_003829075.1 | amino acid ABC transporter permease | - |
| NRBB56_RS04570 () | 1050597..1051259 | - | 663 | WP_014483851.1 | amino acid ABC transporter permease | - |
| NRBB56_RS04575 () | 1051701..1052801 | + | 1101 | WP_106630393.1 | hypothetical protein | VF |
| NRBB56_RS04580 () | 1052982..1053842 | - | 861 | WP_003833466.1 | hypothetical protein | VF |
| NRBB56_RS04585 () | 1053869..1054126 | - | 258 | WP_106630394.1 | TfoX/Sxy family protein | - |
| NRBB56_RS04590 () | 1054280..1054489 | + | 210 | WP_003829088.1 | hypothetical protein | - |
| NRBB56_RS04595 () | 1054515..1055897 | + | 1383 | WP_003829089.1 | MATE family efflux transporter | - |
| NRBB56_RS04600 () | 1055902..1058145 | + | 2244 | WP_003829091.1 | excinuclease ABC subunit UvrA | - |
| NRBB56_RS04605 () | 1058250..1058538 | - | 289 | Protein_857 | IS256 family transposase | - |
| NRBB56_RS11030 () | 1058756..1058911 | + | 156 | WP_019728038.1 | hypothetical protein | - |
| NRBB56_RS04615 () | 1059009..1060274 | - | 1266 | WP_015438706.1 | Fic family protein | - |
| NRBB56_RS04625 () | 1060816..1061181 | - | 366 | WP_025299744.1 | YccF domain-containing protein | - |
| NRBB56_RS04630 () | 1061419..1062288 | + | 870 | WP_003829104.1 | class I SAM-dependent methyltransferase | - |
| NRBB56_RS04635 () | 1062382..1062996 | + | 615 | WP_003829107.1 | cupin domain-containing protein | - |
| NRBB56_RS04640 () | 1063213..1063536 | - | 324 | WP_003829109.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| NRBB56_RS04645 () | 1063523..1063768 | - | 246 | WP_003829112.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB56_RS04650 () | 1063942..1065198 | + | 1257 | WP_106630395.1 | HipA domain-containing protein | - |
| NRBB56_RS04655 () | 1065463..1065654 | + | 192 | WP_106630396.1 | XRE family transcriptional regulator | - |
| NRBB56_RS04660 () | 1065838..1067109 | - | 1272 | WP_003829121.1 | MFS transporter | - |
| NRBB56_RS04665 () | 1067266..1067928 | - | 663 | WP_019728044.1 | hypothetical protein | VF |
| NRBB56_RS04675 () | 1068289..1069500 | + | 1212 | WP_157825751.1 | hypothetical protein ; Integrase | Integrase |
| NRBB56_RS04680 () | 1069554..1070690 | - | 1137 | WP_106630399.1 | protein rep | - |
| NRBB56_RS04685 () | 1070629..1071516 | - | 888 | WP_157825752.1 | AAA family ATPase | - |
| NRBB56_RS04690 () | 1071513..1071908 | - | 396 | WP_106630401.1 | hypothetical protein | - |
| NRBB56_RS04695 () | 1071965..1072291 | - | 327 | WP_106630402.1 | hypothetical protein | - |
| NRBB56_RS04700 () | 1072488..1073003 | + | 516 | WP_106630403.1 | hypothetical protein | - |
| NRBB56_RS04705 () | 1073088..1074089 | + | 1002 | WP_157825753.1 | DUF4878 domain-containing protein | - |
| NRBB56_RS04710 () | 1074490..1075443 | - | 954 | WP_106630405.1 | colicin transporter | - |
| NRBB56_RS04715 () | 1075652..1075873 | + | 222 | WP_106630406.1 | helix-turn-helix domain-containing protein | - |
| NRBB56_RS04720 () | 1075889..1076347 | - | 459 | WP_106630407.1 | hypothetical protein | - |
| NRBB56_RS10905 () | 1076577..1076765 | - | 189 | WP_157825754.1 | hypothetical protein | - |
| NRBB56_RS04725 () | 1077648..1079411 | + | 1764 | WP_198554109.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|