MGE detailed information
MGE type: Genomic_island MGE length: 44491 bp
Accession: NZ_CP021393 Location: 982122..1026612 Organism: Bifidobacterium breve strain NRBB52 Replicon: chromosome
Accession: NZ_CP021393 Location: 982122..1026612 Organism: Bifidobacterium breve strain NRBB52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB52_RS04310 () | 977353..978201 | - | 849 | WP_003833469.1 | transporter substrate-binding domain-containing protein | - |
| NRBB52_RS04315 () | 978271..979014 | - | 744 | WP_171842860.1 | ATP-binding cassette domain-containing protein | - |
| NRBB52_RS04320 () | 979052..979759 | - | 708 | WP_003829075.1 | amino acid ABC transporter permease | - |
| NRBB52_RS04325 () | 979737..980399 | - | 663 | WP_014483851.1 | amino acid ABC transporter permease | - |
| NRBB52_RS04330 () | 980841..981941 | + | 1101 | WP_080867978.1 | redox-regulated ATPase YchF | - |
| NRBB52_RS04335 () | 982122..982982 | - | 861 | WP_003833466.1 | HTH-type transcriptional activator RhaS | VF |
| NRBB52_RS04340 () | 983038..983266 | - | 229 | Protein_810 | TfoX/Sxy family DNA transformation protein | - |
| NRBB52_RS04345 () | 983420..983628 | + | 209 | Protein_811 | hypothetical protein | - |
| NRBB52_RS04350 () | 983654..985036 | + | 1383 | WP_003829089.1 | MATE family efflux transporter | - |
| NRBB52_RS04355 () | 985041..987284 | + | 2244 | WP_014483849.1 | excinuclease ABC subunit UvrA | - |
| NRBB52_RS04360 () | 987389..987677 | - | 289 | Protein_814 | IS256 family transposase | - |
| NRBB52_RS04370 () | 988148..989413 | - | 1266 | WP_015438706.1 | Fic family protein | - |
| NRBB52_RS04380 () | 989955..990320 | - | 366 | WP_025299744.1 | YccF domain-containing protein | - |
| NRBB52_RS04385 () | 990558..991427 | + | 870 | WP_003829104.1 | class I SAM-dependent methyltransferase | - |
| NRBB52_RS04390 () | 991521..992135 | + | 615 | WP_003829107.1 | cupin domain-containing protein | - |
| NRBB52_RS04395 () | 992352..992675 | - | 324 | WP_003829109.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| NRBB52_RS04400 () | 992662..992907 | - | 246 | WP_003829112.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB52_RS04405 () | 993079..994335 | + | 1257 | WP_015438708.1 | HipA domain-containing protein | - |
| NRBB52_RS04410 () | 994601..994792 | + | 192 | WP_003829118.1 | hypothetical protein | - |
| NRBB52_RS04415 () | 994976..996247 | - | 1272 | WP_025301184.1 | MFS transporter | - |
| NRBB52_RS04420 () | 996404..997066 | - | 663 | WP_014483844.1 | hypothetical protein | VF |
| NRBB52_RS04435 () | 997948..999999 | + | 2052 | WP_080867980.1 | DHA2 family efflux MFS transporter permease subunit | - |
| NRBB52_RS04445 () | 1000311..1001801 | + | 1491 | WP_080867982.1 | MFS transporter | - |
| NRBB52_RS04450 () | 1001839..1003539 | - | 1701 | WP_071474567.1 | Serine/threonine-protein kinase PknD | VF |
| NRBB52_RS04455 () | 1003601..1004041 | - | 441 | WP_013582520.1 | transcriptional regulator | - |
| NRBB52_RS04460 () | 1004474..1006018 | + | 1545 | WP_080867984.1 | hypothetical protein | - |
| NRBB52_RS04465 () | 1006072..1006308 | + | 237 | WP_080867986.1 | hypothetical protein | - |
| NRBB52_RS04470 () | 1006391..1007554 | + | 1164 | WP_080867989.1 | SPFH domain-containing protein | - |
| NRBB52_RS04475 () | 1007729..1008346 | + | 618 | WP_106641043.1 | excalibur calcium-binding domain-containing protein | - |
| NRBB52_RS04480 () | 1008368..1008922 | - | 555 | WP_015438717.1 | helix-turn-helix transcriptional regulator | - |
| NRBB52_RS04485 () | 1009166..1009402 | - | 237 | Protein_834 | IS30 family transposase | - |
| NRBB52_RS04490 () | 1009595..1011055 | + | 1461 | Protein_835 | glycogen/starch/alpha-glucan family phosphorylase | - |
| NRBB52_RS04495 () | 1011319..1012563 | - | 1245 | WP_003829137.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| NRBB52_RS04500 () | 1012657..1013469 | - | 813 | WP_003829139.1 | glucosamine-6-phosphate deaminase | - |
| NRBB52_RS04505 () | 1013543..1014517 | - | 975 | WP_080867994.1 | ROK family protein | - |
| NRBB52_RS04510 () | 1014573..1015757 | - | 1185 | WP_080867996.1 | ROK family protein | - |
| NRBB52_RS04515 () | 1016076..1016915 | + | 840 | WP_015438720.1 | D-hexose-6-phosphate mutarotase | - |
| NRBB52_RS04520 () | 1017167..1018594 | + | 1428 | WP_015438721.1 | sugar porter family MFS transporter | - |
| NRBB52_RS04525 () | 1018684..1020210 | + | 1527 | WP_003829148.1 | sulfatase-like hydrolase/transferase | - |
| NRBB52_RS04530 () | 1020333..1021676 | + | 1344 | WP_080867999.1 | anaerobic sulfatase maturase | - |
| NRBB52_RS04535 () | 1021725..1022525 | + | 801 | WP_025301188.1 | sulfite exporter TauE/SafE family protein | - |
| NRBB52_RS04540 () | 1022637..1022960 | + | 324 | Protein_845 | transposase | - |
| NRBB52_RS04545 () | 1022990..1023574 | + | 585 | WP_106641202.1 | sulfite exporter TauE/SafE family protein | - |
| NRBB52_RS04550 () | 1023729..1024091 | - | 363 | WP_015438725.1 | VOC family protein | - |
| NRBB52_RS04555 () | 1024224..1024403 | - | 180 | Protein_848 | hypothetical protein | - |
| NRBB52_RS04560 () | 1024544..1025911 | + | 1368 | WP_080868007.1 | MFS transporter | - |
| NRBB52_RS04565 () | 1026031..1026612 | + | 582 | WP_015438727.1 | haloacid dehalogenase-like hydrolase | - |
| NRBB52_RS04570 () | 1026663..1027493 | + | 831 | WP_080868010.1 | histidine phosphatase family protein | - |
| NRBB52_RS04575 () | 1027601..1028890 | + | 1290 | WP_080868013.1 | NCS2 family nucleobase:cation symporter | - |
| NRBB52_RS04580 () | 1029263..1031290 | + | 2028 | WP_025332217.1 | DEAD/DEAH box helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|