MGE detailed information
MGE type: Genomic_island MGE length: 25516 bp
Accession: NZ_CP021386 Location: 1224970..1250485 Organism: Bifidobacterium breve strain NRBB04 Replicon: chromosome
Accession: NZ_CP021386 Location: 1224970..1250485 Organism: Bifidobacterium breve strain NRBB04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB04_RS05390 () | 1220346..1221170 | + | 825 | WP_003829401.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRBB04_RS05395 () | 1221356..1221490 | + | 135 | WP_077320901.1 | DUF2316 family protein | - |
| NRBB04_RS05400 () | 1221531..1222064 | - | 534 | WP_003829402.1 | GNAT family N-acetyltransferase | - |
| NRBB04_RS05405 () | 1222200..1222529 | - | 330 | WP_003829403.1 | hypothetical protein | - |
| NRBB04_RS05420 () | 1222939..1223745 | - | 807 | WP_011068121.1 | Abi family protein | - |
| NRBB04_RS10430 () | 1223908..1224162 | - | 255 | WP_003829406.1 | hypothetical protein | - |
| NRBB04_RS05450 () | 1225675..1226748 | - | 1074 | WP_014483714.1 | histidine kinase | - |
| NRBB04_RS05455 () | 1226814..1227509 | - | 696 | WP_003829410.1 | response regulator transcription factor | - |
| NRBB04_RS05460 () | 1227635..1228150 | + | 516 | WP_013140733.1 | hypothetical protein | - |
| NRBB04_RS05465 () | 1228147..1229037 | + | 891 | WP_025262987.1 | hypothetical protein | - |
| NRBB04_RS05470 () | 1229034..1229714 | + | 681 | WP_003829413.1 | putative ABC transporter ATP-binding protein YknY | VF |
| NRBB04_RS05475 () | 1229711..1230880 | + | 1170 | WP_025262988.1 | ABC transporter permease | - |
| NRBB04_RS05480 () | 1231065..1231334 | + | 270 | WP_025262989.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB04_RS05485 () | 1231338..1231631 | + | 294 | WP_025262990.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| NRBB04_RS10340 () | 1231637..1231936 | - | 300 | WP_025262991.1 | hypothetical protein | - |
| NRBB04_RS05495 () | 1232299..1232849 | + | 551 | Protein_1017 | ECF RNA polymerase sigma-E factor | VF |
| NRBB04_RS05500 () | 1232883..1233710 | + | 828 | WP_015438835.1 | hypothetical protein | - |
| NRBB04_RS05505 () | 1233842..1234468 | + | 627 | WP_025262993.1 | hypothetical protein | - |
| NRBB04_RS05510 () | 1234465..1235247 | + | 783 | WP_025262994.1 | hypothetical protein | - |
| NRBB04_RS05515 () | 1235300..1236175 | + | 876 | WP_021649674.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| NRBB04_RS05520 () | 1236230..1236628 | + | 399 | WP_015438839.1 | hypothetical protein | - |
| NRBB04_RS05525 () | 1236723..1237085 | - | 363 | WP_003829427.1 | hypothetical protein | - |
| NRBB04_RS05530 () | 1237209..1238084 | - | 876 | WP_014484916.1 | EamA family transporter | - |
| NRBB04_RS05535 () | 1238288..1238911 | - | 624 | WP_025262995.1 | hypothetical protein | - |
| NRBB04_RS05540 () | 1238908..1239636 | - | 729 | WP_012577741.1 | hypothetical protein | - |
| NRBB04_RS05545 () | 1239641..1240297 | - | 657 | WP_025262996.1 | ATP-binding cassette domain-containing protein | - |
| NRBB04_RS10435 () | 1240230..1240427 | - | 198 | WP_162531455.1 | hypothetical protein | - |
| NRBB04_RS05550 () | 1240624..1241857 | + | 1234 | Protein_1029 | IS30 family transposase ISBlo4 | Transposase |
| NRBB04_RS05555 () | 1242047..1242715 | - | 669 | WP_012577742.1 | response regulator transcription factor | - |
| NRBB04_RS05560 () | 1242712..1243941 | - | 1230 | WP_003829436.1 | two-component sensor histidine kinase | - |
| NRBB04_RS05565 () | 1243974..1245398 | - | 1425 | WP_003829437.1 | FtsX-like permease family protein | - |
| NRBB04_RS05570 () | 1245391..1246293 | - | 903 | WP_012577745.1 | Bacitracin export ATP-binding protein BceA | VF |
| NRBB04_RS05575 () | 1246488..1247021 | - | 534 | WP_012577746.1 | hypothetical protein | - |
| NRBB04_RS05580 () | 1247353..1247655 | + | 303 | WP_003829440.1 | DUF2089 family protein | - |
| NRBB04_RS05585 () | 1247658..1247999 | + | 342 | WP_025262997.1 | hypothetical protein | - |
| NRBB04_RS05590 () | 1248140..1248553 | - | 414 | WP_025262998.1 | MerR family transcriptional regulator | - |
| NRBB04_RS05595 () | 1248975..1249616 | + | 642 | WP_012577747.1 | hypothetical protein | - |
| NRBB04_RS10440 () | 1249708..1250001 | + | 294 | WP_012471870.1 | hypothetical protein | - |
| NRBB04_RS10445 () | 1250339..1250485 | + | 147 | WP_179134171.1 | hypothetical protein | - |
| NRBB04_RS10450 () | 1250654..1251094 | + | 441 | WP_003829448.1 | hypothetical protein | - |
| NRBB04_RS10455 () | 1251238..1251434 | + | 197 | Protein_1042 | permease | - |
| NRBB04_RS05615 () | 1251758..1253338 | + | 1581 | WP_025262999.1 | amino acid permease | - |
| NRBB04_RS05620 () | 1253580..1253819 | - | 240 | WP_003829454.1 | hypothetical protein | - |
| NRBB04_RS05625 () | 1254116..1254469 | + | 354 | WP_014483707.1 | DUF488 domain-containing protein | - |
| NRBB04_RS10460 () | 1254535..1254963 | - | 429 | WP_015438848.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|