MGE detailed information
MGE type: Genomic_island MGE length: 48285 bp
Accession: NZ_CP021384 Location: 956913..1005197 Organism: Bifidobacterium breve strain NRBB01 Replicon: chromosome
Accession: NZ_CP021384 Location: 956913..1005197 Organism: Bifidobacterium breve strain NRBB01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB01_RS04180 () | 952135..952983 | - | 849 | WP_003829071.1 | transporter substrate-binding domain-containing protein | - |
| NRBB01_RS04185 () | 953053..953796 | - | 744 | WP_172644906.1 | amino acid ABC transporter ATP-binding protein | - |
| NRBB01_RS04190 () | 953834..954541 | - | 708 | WP_003829075.1 | amino acid ABC transporter permease | - |
| NRBB01_RS04195 () | 954519..955181 | - | 663 | WP_014483851.1 | amino acid ABC transporter permease | - |
| NRBB01_RS04200 () | 955632..956732 | + | 1101 | WP_003829080.1 | redox-regulated ATPase YchF | - |
| NRBB01_RS04205 () | 956913..957773 | - | 861 | WP_003833466.1 | Regulatory protein SoxS | VF |
| NRBB01_RS04210 () | 957829..958057 | - | 229 | Protein_776 | TfoX/Sxy family DNA transformation protein | - |
| NRBB01_RS04215 () | 958211..958420 | + | 210 | WP_003829088.1 | hypothetical protein | - |
| NRBB01_RS04220 () | 958446..959828 | + | 1383 | WP_003829089.1 | MATE family efflux transporter | - |
| NRBB01_RS04225 () | 959833..962076 | + | 2244 | WP_003829091.1 | excinuclease ABC subunit UvrA | - |
| NRBB01_RS04230 () | 962181..962469 | - | 289 | Protein_780 | IS256 family transposase | - |
| NRBB01_RS04240 () | 962940..964205 | - | 1266 | WP_106620598.1 | Fic family protein | - |
| NRBB01_RS04250 () | 964747..965112 | - | 366 | WP_032738175.1 | YccF domain-containing protein | - |
| NRBB01_RS04255 () | 965350..966219 | + | 870 | WP_003829104.1 | class I SAM-dependent methyltransferase | - |
| NRBB01_RS04260 () | 966313..966927 | + | 615 | WP_003829107.1 | cupin domain-containing protein | - |
| NRBB01_RS04265 () | 967144..967467 | - | 324 | WP_003829109.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| NRBB01_RS04270 () | 967454..967699 | - | 246 | WP_003829112.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB01_RS04275 () | 967873..969129 | + | 1257 | WP_003829116.1 | HipA domain-containing protein | - |
| NRBB01_RS04280 () | 969394..969585 | + | 192 | WP_003829118.1 | hypothetical protein | - |
| NRBB01_RS04285 () | 969769..971040 | - | 1272 | WP_003829121.1 | MFS transporter | - |
| NRBB01_RS04290 () | 971197..971859 | - | 663 | WP_025262926.1 | HTH-type transcriptional repressor KstR2 | VF |
| NRBB01_RS04305 () | 972740..974791 | + | 2052 | WP_019728045.1 | DHA2 family efflux MFS transporter permease subunit | - |
| NRBB01_RS04310 () | 974885..975081 | + | 197 | Protein_792 | MFS transporter | - |
| NRBB01_RS04315 () | 975151..976764 | + | 1614 | Protein_793 | glycogen/starch/alpha-glucan family phosphorylase | - |
| NRBB01_RS04320 () | 977027..978271 | - | 1245 | WP_003829137.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| NRBB01_RS04325 () | 978365..979177 | - | 813 | WP_003829139.1 | glucosamine-6-phosphate deaminase | - |
| NRBB01_RS04330 () | 979263..980237 | - | 975 | WP_003829141.1 | ROK family protein | - |
| NRBB01_RS04335 () | 980293..981477 | - | 1185 | WP_003829142.1 | ROK family protein | - |
| NRBB01_RS04340 () | 981796..982635 | + | 840 | WP_003829144.1 | D-hexose-6-phosphate mutarotase | - |
| NRBB01_RS04345 () | 982888..984315 | + | 1428 | WP_003829146.1 | sugar porter family MFS transporter | - |
| NRBB01_RS04350 () | 984405..985931 | + | 1527 | WP_003829148.1 | sulfatase-like hydrolase/transferase | - |
| NRBB01_RS04355 () | 986054..987397 | + | 1344 | WP_003829150.1 | anaerobic sulfatase maturase | - |
| NRBB01_RS04360 () | 987446..988246 | + | 801 | WP_003829152.1 | sulfite exporter TauE/SafE family protein | - |
| NRBB01_RS04365 () | 988359..988685 | + | 327 | Protein_803 | IS3 family transposase ISBad2 | Transposase |
| NRBB01_RS04370 () | 988706..989296 | + | 591 | WP_100218481.1 | sulfite exporter TauE/SafE family protein | - |
| NRBB01_RS04375 () | 989436..989798 | - | 363 | WP_015438725.1 | VOC family protein | - |
| NRBB01_RS04380 () | 989931..990110 | - | 180 | Protein_806 | hypothetical protein | - |
| NRBB01_RS04385 () | 990259..991629 | + | 1371 | WP_003829157.1 | MFS transporter | - |
| NRBB01_RS04390 () | 991748..992329 | + | 582 | WP_003829159.1 | haloacid dehalogenase-like hydrolase | - |
| NRBB01_RS04395 () | 992380..993210 | + | 831 | WP_003829161.1 | histidine phosphatase family protein | - |
| NRBB01_RS04400 () | 993316..994605 | + | 1290 | WP_003829163.1 | NCS2 family nucleobase:cation symporter | - |
| NRBB01_RS04405 () | 994978..997005 | + | 2028 | WP_003829166.1 | DEAD/DEAH box helicase | - |
| NRBB01_RS04410 () | 997045..998340 | - | 1296 | WP_032738176.1 | alpha-amylase family protein | - |
| NRBB01_RS04415 () | 998592..999644 | + | 1053 | WP_003829169.1 | inorganic phosphate transporter | - |
| NRBB01_RS04420 () | 999662..1000285 | + | 624 | WP_003829170.1 | DUF47 family protein | - |
| NRBB01_RS04425 () | 1000468..1001121 | - | 654 | WP_003829171.1 | Transcriptional regulatory protein DegU | VF |
| NRBB01_RS04430 () | 1001121..1002473 | - | 1353 | WP_003829177.1 | two-component sensor histidine kinase | - |
| NRBB01_RS04435 () | 1002859..1003842 | + | 984 | WP_025262935.1 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA | VF |
| NRBB01_RS04440 () | 1003959..1005197 | + | 1239 | WP_003829179.1 | ABC transporter permease | - |
| NRBB01_RS04445 () | 1005184..1006623 | + | 1440 | WP_003829180.1 | ABC transporter permease | - |
| NRBB01_RS04450 () | 1006628..1008106 | - | 1479 | WP_015438736.1 | putative DNA binding domain-containing protein | - |
| NRBB01_RS04455 () | 1008282..1008887 | + | 606 | Protein_821 | lysophospholipase | - |
| NRBB01_RS04460 () | 1008922..1010142 | + | 1221 | WP_025262936.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|