MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 80798 bp
Accession: NZ_CP021359 Location: 1692731..1773528 Organism: Acidovorax carolinensis strain NA2 Replicon: chromosome
Accession: NZ_CP021359 Location: 1692731..1773528 Organism: Acidovorax carolinensis strain NA2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBP33_RS08020 () | 1688268..1688834 | + | 567 | WP_086912088.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| CBP33_RS08025 () | 1688905..1689990 | + | 1086 | WP_086912089.1 | tartrate dehydrogenase | - |
| CBP33_RS08030 () | 1690294..1690566 | + | 273 | WP_024815362.1 | HU family DNA-binding protein | - |
| CBP33_RS08040 () | 1690718..1692631 | + | 1914 | WP_086912090.1 | SurA N-terminal domain-containing protein | - |
| CBP33_RS08050 () | 1692852..1693904 | - | 1053 | WP_086912091.1 | hypothetical protein ; Integrase | Integrase |
| CBP33_RS08055 () | 1693904..1694119 | - | 216 | WP_086912092.1 | DUF4224 domain-containing protein | - |
| CBP33_RS19080 () | 1694120..1695268 | - | 1149 | WP_162290790.1 | hypothetical protein | - |
| CBP33_RS19085 () | 1695443..1696027 | + | 585 | WP_157896556.1 | helix-turn-helix transcriptional regulator | - |
| CBP33_RS08060 () | 1696151..1696801 | - | 651 | WP_086912093.1 | hypothetical protein | - |
| CBP33_RS08065 () | 1696798..1697604 | - | 807 | WP_162290791.1 | hypothetical protein | - |
| CBP33_RS08070 () | 1698176..1698688 | + | 513 | WP_086912095.1 | hypothetical protein | - |
| CBP33_RS08075 () | 1699242..1699556 | + | 315 | WP_162290792.1 | DUF1640 domain-containing protein | - |
| CBP33_RS19315 () | 1700220..1700618 | - | 399 | WP_086912097.1 | hypothetical protein | - |
| CBP33_RS08090 () | 1700790..1702021 | + | 1232 | WP_157896558.1 | IS3 family transposase ISStma17 | Transposase |
| CBP33_RS08095 () | 1702397..1702810 | - | 414 | WP_086912098.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CBP33_RS08100 () | 1702811..1703041 | - | 231 | WP_086912099.1 | antitoxin | Antitoxin Detail |
| CBP33_RS19095 () | 1703428..1703721 | + | 294 | WP_157896559.1 | hypothetical protein | - |
| CBP33_RS08105 () | 1703645..1704547 | - | 903 | WP_086912100.1 | hypothetical protein | - |
| CBP33_RS08110 () | 1704544..1704864 | - | 321 | WP_086912101.1 | hypothetical protein | - |
| CBP33_RS08115 () | 1704915..1708556 | - | 3642 | WP_086912102.1 | BREX system P-loop protein BrxC | - |
| CBP33_RS08120 () | 1708608..1709195 | - | 588 | WP_086912103.1 | DUF1788 domain-containing protein | - |
| CBP33_RS08125 () | 1709192..1709785 | - | 594 | WP_086912104.1 | DUF1819 family protein | - |
| CBP33_RS08130 () | 1709901..1710116 | - | 216 | Protein_1617 | IS5 family transposase ISBmu20 | Transposase |
| CBP33_RS08135 () | 1710133..1710348 | - | 216 | Protein_1618 | IS1595 family transposase ISJli1 | Transposase |
| CBP33_RS08140 () | 1710563..1711288 | - | 726 | WP_086912105.1 | FadR family transcriptional regulator | - |
| CBP33_RS08145 () | 1711573..1712796 | + | 1224 | WP_086912106.1 | ABC transporter substrate-binding protein | - |
| CBP33_RS08150 () | 1712924..1714069 | + | 1146 | WP_086912107.1 | phosphotransferase family protein | - |
| CBP33_RS08155 () | 1714104..1715279 | + | 1176 | WP_086914034.1 | acyl-CoA dehydrogenase family protein | - |
| CBP33_RS08160 () | 1715276..1716037 | + | 762 | WP_086912108.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CBP33_RS08165 () | 1716039..1717241 | + | 1203 | WP_086912109.1 | CoA transferase | - |
| CBP33_RS08170 () | 1717325..1718962 | + | 1638 | WP_086912110.1 | AMP-binding protein | - |
| CBP33_RS08175 () | 1719064..1720233 | + | 1170 | WP_086914035.1 | iron-containing alcohol dehydrogenase | - |
| CBP33_RS08180 () | 1720483..1720770 | + | 288 | Protein_1627 | DNA/RNA non-specific endonuclease | - |
| CBP33_RS08185 () | 1720848..1721663 | - | 816 | WP_086913883.1 | IS21 family transposase ISVapa4 | Transposase |
| CBP33_RS08190 () | 1721656..1723179 | - | 1524 | WP_086914036.1 | IS21 family transposase ISJsp3 | Transposase |
| CBP33_RS08195 () | 1723538..1724086 | - | 549 | WP_086912111.1 | phasin family protein | - |
| CBP33_RS08200 () | 1724288..1725229 | + | 942 | WP_086912112.1 | histone deacetylase | - |
| CBP33_RS08205 () | 1725226..1725705 | + | 480 | WP_086912113.1 | acyl-CoA thioesterase | - |
| CBP33_RS08210 () | 1725907..1727115 | + | 1209 | WP_086914037.1 | nicotinate phosphoribosyltransferase | - |
| CBP33_RS08215 () | 1727196..1728614 | + | 1419 | WP_086912114.1 | sodium:proton antiporter | - |
| CBP33_RS08220 () | 1728787..1729776 | + | 990 | WP_086912115.1 | D-glycerate dehydrogenase | - |
| CBP33_RS08225 () | 1729848..1731662 | + | 1815 | WP_086914038.1 | DNA recombination protein RmuC | - |
| CBP33_RS08230 () | 1731682..1732848 | + | 1167 | WP_086912116.1 | MFS transporter | - |
| CBP33_RS08235 () | 1732882..1733745 | - | 864 | WP_086912117.1 | TIGR00730 family Rossman fold protein | - |
| CBP33_RS08240 () | 1733942..1734328 | - | 387 | WP_086914039.1 | fluoride efflux transporter CrcB | - |
| CBP33_RS08245 () | 1734540..1738208 | + | 3669 | WP_086912118.1 | hydantoinase B/oxoprolinase family protein | - |
| CBP33_RS08250 () | 1738308..1738679 | - | 372 | WP_086912119.1 | monovalent cation/H(+) antiporter subunit G | - |
| CBP33_RS08255 () | 1738676..1738957 | - | 282 | WP_086912120.1 | K+/H+ antiporter subunit F | - |
| CBP33_RS08260 () | 1738954..1739442 | - | 489 | WP_086912121.1 | Na+/H+ antiporter subunit E | - |
| CBP33_RS08265 () | 1739439..1741172 | - | 1734 | WP_086912122.1 | monovalent cation/H+ antiporter subunit D | - |
| CBP33_RS08270 () | 1741243..1741608 | - | 366 | WP_086912123.1 | Na+/H+ antiporter subunit C | - |
| CBP33_RS08275 () | 1741608..1744559 | - | 2952 | WP_086912124.1 | monovalent cation/H+ antiporter subunit A | - |
| CBP33_RS08280 () | 1744688..1745002 | - | 315 | WP_086912125.1 | helix-hairpin-helix domain-containing protein | - |
| CBP33_RS08285 () | 1745104..1746261 | - | 1158 | WP_086912126.1 | lipopolysaccharide assembly protein LapB | - |
| CBP33_RS08290 () | 1746251..1746565 | - | 315 | WP_086912127.1 | LapA family protein | - |
| CBP33_RS08295 () | 1746721..1747026 | - | 306 | WP_086912128.1 | integration host factor subunit beta | - |
| CBP33_RS08300 () | 1747117..1748802 | - | 1686 | WP_086912129.1 | 30S ribosomal protein S1 | - |
| CBP33_RS08305 () | 1749010..1751043 | - | 2034 | WP_086912130.1 | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase | - |
| CBP33_RS08310 () | 1751175..1752047 | - | 873 | WP_086912131.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| CBP33_RS08315 () | 1752057..1753154 | - | 1098 | WP_086912132.1 | prephenate dehydratase | - |
| CBP33_RS08320 () | 1753196..1754305 | - | 1110 | WP_086912133.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| CBP33_RS08325 () | 1754406..1757108 | - | 2703 | WP_086912134.1 | DNA gyrase subunit A | - |
| CBP33_RS08330 () | 1757333..1757974 | + | 642 | WP_086912135.1 | hypothetical protein | VF |
| CBP33_RS08335 () | 1758066..1758776 | + | 711 | WP_086912136.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| CBP33_RS08340 () | 1758785..1759450 | + | 666 | WP_086912137.1 | HAD-IA family hydrolase | - |
| CBP33_RS08350 () | 1760282..1760602 | + | 321 | WP_086912138.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| CBP33_RS08355 () | 1760602..1761051 | + | 450 | WP_086914040.1 | type II toxin-antitoxin system YhaV family toxin | - |
| CBP33_RS08360 () | 1761074..1761646 | + | 573 | Protein_1662 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CBP33_RS08365 () | 1761860..1762282 | - | 423 | Protein_1663 | LacI family transcriptional regulator | - |
| CBP33_RS08370 () | 1762279..1763637 | - | 1359 | WP_086912140.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| CBP33_RS08375 () | 1763634..1764140 | - | 507 | WP_086912141.1 | DUF2924 domain-containing protein | - |
| CBP33_RS08380 () | 1764141..1764356 | - | 216 | WP_086912142.1 | hypothetical protein | - |
| CBP33_RS08385 () | 1764663..1766864 | + | 2202 | WP_086912143.1 | hypothetical protein | - |
| CBP33_RS08390 () | 1767076..1767309 | + | 234 | WP_086914041.1 | terminase | - |
| CBP33_RS08395 () | 1767306..1767776 | + | 471 | WP_086912144.1 | hypothetical protein | - |
| CBP33_RS08400 () | 1767782..1768096 | + | 315 | WP_086912145.1 | hypothetical protein | - |
| CBP33_RS08405 () | 1768093..1768968 | + | 876 | WP_086912146.1 | ATP-binding protein | - |
| CBP33_RS08410 () | 1768971..1769576 | + | 606 | WP_086912147.1 | hypothetical protein | - |
| CBP33_RS08415 () | 1769590..1771266 | + | 1677 | WP_086912148.1 | DEAD/DEAH box helicase | - |
| CBP33_RS08420 () | 1771263..1771685 | + | 423 | WP_086912149.1 | hypothetical protein | - |
| CBP33_RS08425 () | 1771685..1772440 | + | 756 | WP_086912150.1 | hypothetical protein | - |
| CBP33_RS08430 () | 1772437..1774629 | + | 2193 | WP_204246711.1 | AAA family ATPase | - |
| CBP33_RS08435 () | 1774929..1775396 | + | 468 | WP_204246731.1 | hypothetical protein | - |
| CBP33_RS08440 () | 1775399..1775602 | + | 204 | WP_086912152.1 | hypothetical protein | - |
| CBP33_RS08445 () | 1775595..1775981 | + | 387 | WP_086912153.1 | RNA polymerase subunit sigma | - |
| CBP33_RS08450 () | 1776176..1777474 | + | 1299 | WP_086912154.1 | site-specific DNA-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|