MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 54821 bp
Accession: NZ_CP021268 Location: 2654449..2709269 Organism: Legionella pneumophila subsp. pneumophila strain Birmingham Replicon: chromosome
Accession: NZ_CP021268 Location: 2654449..2709269 Organism: Legionella pneumophila subsp. pneumophila strain Birmingham Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA922_RS12065 () | 2649751..2649990 | + | 240 | WP_010948064.1 | 30S ribosomal protein S21 | - |
| CA922_RS12070 () | 2650193..2650636 | + | 444 | WP_014842313.1 | lpg2359 family Dot/Icm T4SS effector | - |
| CA922_RS12075 () | 2650645..2652377 | + | 1733 | Protein_2327 | DNA primase | - |
| CA922_RS12080 () | 2652464..2654329 | + | 1866 | WP_014844507.1 | RNA polymerase sigma factor RpoD | - |
| CA922_RS12090 () | 2654586..2655497 | - | 912 | WP_106141306.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CA922_RS12100 () | 2656096..2656281 | + | 186 | WP_106141252.1 | hypothetical protein | - |
| CA922_RS12105 () | 2656274..2657050 | + | 777 | WP_106141253.1 | methylase | - |
| CA922_RS12110 () | 2657036..2657593 | - | 558 | WP_106141254.1 | GNAT family N-acetyltransferase | - |
| CA922_RS12115 () | 2657604..2658908 | - | 1305 | WP_106141255.1 | hypothetical protein | - |
| CA922_RS12120 () | 2659039..2660520 | + | 1482 | WP_106141256.1 | oligopeptide:H+ symporter | - |
| CA922_RS12125 () | 2660670..2660912 | + | 243 | WP_106141257.1 | hypothetical protein | - |
| CA922_RS12130 () | 2661150..2661338 | + | 189 | WP_058450414.1 | helix-turn-helix domain-containing protein | - |
| CA922_RS12135 () | 2661332..2664871 | + | 3540 | WP_106141258.1 | DUF3883 domain-containing protein | - |
| CA922_RS15855 () | 2664881..2665486 | + | 606 | WP_202863879.1 | DUF1156 domain-containing protein | - |
| CA922_RS12140 () | 2665723..2667738 | + | 2016 | WP_202863880.1 | DUF1156 domain-containing protein | - |
| CA922_RS12145 () | 2667750..2670596 | + | 2847 | WP_106141259.1 | ATP-binding protein | - |
| CA922_RS12150 () | 2670634..2671317 | - | 684 | WP_106141260.1 | helix-turn-helix domain-containing protein | - |
| CA922_RS12155 () | 2671519..2672403 | + | 885 | WP_106141261.1 | hypothetical protein | - |
| CA922_RS12160 () | 2672423..2672734 | + | 312 | WP_106141307.1 | Vir protein | - |
| CA922_RS12165 () | 2672751..2673011 | + | 261 | WP_106141262.1 | carbon storage regulator CsrA | - |
| CA922_RS12170 () | 2673040..2674005 | + | 966 | WP_106141263.1 | Putative conjugal transfer protein | VF |
| CA922_RS12175 () | 2674017..2674394 | + | 378 | WP_106141264.1 | TrbC/VirB2 family protein | - |
| CA922_RS12180 () | 2674391..2674690 | + | 300 | WP_106141265.1 | conjugal transfer protein TrbD | - |
| CA922_RS12185 () | 2674687..2677221 | + | 2535 | WP_106141266.1 | conjugal transfer protein TrbE | - |
| CA922_RS12190 () | 2677170..2677916 | + | 747 | WP_106141267.1 | conjugal transfer protein TrbF | - |
| CA922_RS12195 () | 2677913..2678788 | + | 876 | WP_106141268.1 | P-type conjugative transfer protein TrbG | - |
| CA922_RS12200 () | 2678791..2679198 | + | 408 | WP_106141269.1 | conjugal transfer protein TrbH | - |
| CA922_RS12205 () | 2679204..2680448 | + | 1245 | WP_106141270.1 | TrbI/VirB10 family protein | - |
| CA922_RS12210 () | 2680463..2681203 | + | 741 | WP_042754978.1 | P-type conjugative transfer protein TrbJ | - |
| CA922_RS12215 () | 2681227..2681439 | + | 213 | WP_106141271.1 | hypothetical protein | - |
| CA922_RS12220 () | 2681444..2682826 | + | 1383 | WP_106141272.1 | P-type conjugative transfer protein TrbL | - |
| CA922_RS12225 () | 2682823..2684712 | + | 1890 | WP_106141273.1 | Conjugal transfer protein TraG | VF |
| CA922_RS12230 () | 2684709..2685260 | + | 552 | WP_106141274.1 | conjugative transfer signal peptidase TraF | - |
| CA922_RS15820 () | 2685250..2685414 | + | 165 | WP_192875091.1 | hypothetical protein | - |
| CA922_RS12235 () | 2685407..2687593 | + | 2187 | WP_106141275.1 | DUF1738 domain-containing protein | - |
| CA922_RS12240 () | 2687710..2688393 | - | 684 | WP_106141276.1 | helix-turn-helix domain-containing protein | - |
| CA922_RS12245 () | 2688560..2690428 | - | 1869 | WP_106141277.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CA922_RS12250 () | 2690425..2690778 | - | 354 | WP_106141278.1 | conjugal transfer transcriptional regulator TraJ | - |
| CA922_RS12255 () | 2691172..2691513 | + | 342 | WP_106141279.1 | TraK family protein | - |
| CA922_RS12260 () | 2691513..2692241 | + | 729 | WP_106141280.1 | conjugal transfer protein TraL | - |
| CA922_RS12265 () | 2692238..2692681 | + | 444 | WP_106141281.1 | conjugal transfer protein TraM | - |
| CA922_RS12270 () | 2692768..2694756 | + | 1989 | WP_202863881.1 | putative DNA binding domain-containing protein | - |
| CA922_RS12280 () | 2695796..2696086 | + | 291 | WP_042754798.1 | hypothetical protein | - |
| CA922_RS12285 () | 2696136..2697311 | - | 1176 | WP_011946822.1 | ISL3 family transposase ISLpn11 | Transposase |
| CA922_RS12290 () | 2697469..2697927 | + | 459 | WP_042754797.1 | hypothetical protein | - |
| CA922_RS12295 () | 2698108..2698368 | + | 261 | WP_042754796.1 | hypothetical protein | - |
| CA922_RS12300 () | 2698417..2698674 | - | 258 | WP_042754795.1 | hypothetical protein | - |
| CA922_RS12305 () | 2698747..2699058 | - | 312 | WP_152030754.1 | hypothetical protein | - |
| CA922_RS12310 () | 2699458..2702109 | - | 2652 | WP_042754793.1 | Ti-type conjugative transfer relaxase TraA | - |
| CA922_RS12315 () | 2702506..2702964 | - | 459 | WP_042754792.1 | hypothetical protein | - |
| CA922_RS12320 () | 2703432..2705183 | - | 1752 | WP_042754791.1 | DUF927 domain-containing protein | - |
| CA922_RS12325 () | 2705266..2705541 | - | 276 | WP_014844516.1 | helix-turn-helix domain-containing protein | - |
| CA922_RS12330 () | 2705984..2706841 | - | 858 | WP_042754790.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CA922_RS12335 () | 2706838..2707446 | - | 609 | WP_042754807.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin Detail |
| CA922_RS12340 () | 2707502..2707714 | - | 213 | WP_042754789.1 | hypothetical protein | - |
| CA922_RS12345 () | 2707832..2709064 | - | 1233 | WP_042754788.1 | Prophage integrase IntS ; Integrase | Integrase |
| CA922_RS12350 () | 2709394..2710569 | - | 1176 | WP_042754787.1 | ISL3-like element ISLpn11 family transposase | - |
| CA922_RS12355 () | 2710656..2711459 | - | 804 | Protein_2382 | IS30 family transposase | - |
| CA922_RS12365 () | 2711865..2712563 | + | 699 | Protein_2383 | hypothetical protein | - |
| CA922_RS12370 () | 2712774..2713808 | + | 1035 | WP_041931975.1 | IS481 family transposase | - |
| CA922_RS12375 () | 2713872..2713979 | + | 108 | Protein_2385 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|