MGE detailed information
MGE type: Prophage MGE length: 47018 bp
Accession: NZ_CP021207 Location: 440715..487732 Organism: Escherichia coli strain strain Z247 Replicon: chromosome
Accession: NZ_CP021207 Location: 440715..487732 Organism: Escherichia coli strain strain Z247 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA270_RS28970 () | 436705..436752 | + | 48 | WP_211180494.1 | protein YnaN | - |
| CA270_RS02305 () | 436766..437749 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| CA270_RS02315 () | 438227..439600 | + | 1374 | WP_000123789.1 | ATP-dependent RNA helicase DbpA | - |
| CA270_RS02320 () | 439728..440663 | - | 936 | WP_001157412.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CA270_RS02325 () | 440715..441950 | - | 1236 | WP_000040852.1 | site-specific integrase | - |
| CA270_RS02330 () | 441952..442167 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| CA270_RS02335 () | 442246..442455 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 442271..442449 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 442271..442449 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 442271..442449 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 442271..442449 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| CA270_RS02340 () | 442448..442642 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| CA270_RS02345 () | 442699..443508 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| CA270_RS02350 () | 443501..446101 | - | 2601 | WP_086353125.1 | exodeoxyribonuclease VIII | - |
| CA270_RS02355 () | 446203..446478 | - | 276 | WP_000632297.1 | protein RacC | - |
| CA270_RS02360 () | 446553..446723 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| CA270_RS02365 () | 446723..446944 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| CA270_RS02375 () | 447386..447874 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| CA270_RS02380 () | 447871..448026 | - | 156 | WP_077766793.1 | DUF1391 family protein | - |
| CA270_RS02390 () | 448346..448822 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| CA270_RS02395 () | 448946..449242 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| CA270_RS02400 () | 449265..449687 | + | 423 | WP_000693797.1 | phage protein | - |
| CA270_RS02405 () | 449700..450556 | + | 857 | Protein_450 | DUF1376 domain-containing protein | - |
| CA270_RS02410 () | 450563..451309 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| CA270_RS02415 () | 451332..452093 | + | 762 | WP_123009612.1 | DUF1627 domain-containing protein | - |
| CA270_RS02420 () | 452110..452532 | + | 423 | WP_001141108.1 | DUF977 family protein | - |
| CA270_RS28215 () | 452694..453197 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| CA270_RS02435 () | 453318..454091 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| CA270_RS02440 () | 454614..454769 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CA270_RS02445 () | 454936..455214 | + | 279 | WP_001410105.1 | hypothetical protein | - |
| CA270_RS02450 () | 455216..456265 | + | 1050 | WP_086353127.1 | DUF968 domain-containing protein | - |
| CA270_RS02455 () | 456278..456652 | + | 375 | WP_001761874.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CA270_RS02460 () | 456649..457470 | + | 822 | WP_032342160.1 | antitermination protein | - |
| CA270_RS02465 () | 457751..458791 | + | 1041 | WP_021562591.1 | hypothetical protein | - |
| CA270_RS02470 () | 458792..459301 | + | 510 | WP_024233158.1 | hypothetical protein | - |
| CA270_RS02475 () | 459615..459830 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| CA270_RS02480 () | 459835..460179 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| CA270_RS02485 () | 460145..460417 | - | 273 | WP_000370551.1 | hypothetical protein | - |
| CA270_RS02490 () | 460523..461056 | + | 534 | WP_000992105.1 | lysozyme | - |
| CA270_RS02500 () | 461273..461458 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| CA270_RS02505 () | 461655..463112 | + | 1458 | WP_024165216.1 | Trk system potassium transporter TrkG | - |
| CA270_RS02515 () | 463250..464041 | + | 792 | WP_001291093.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CA270_RS02520 () | 464034..464966 | + | 933 | WP_001204035.1 | hypothetical protein | - |
| CA270_RS02525 () | 464902..465153 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| CA270_RS02530 () | 465157..466251 | + | 1095 | WP_000089450.1 | terminase small subunit | - |
| CA270_RS02535 () | 466232..467533 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| CA270_RS02540 () | 467536..468942 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| CA270_RS02545 () | 468926..470038 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| CA270_RS02550 () | 470143..470907 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| CA270_RS02555 () | 471006..472145 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| CA270_RS28700 () | 472188..472364 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| CA270_RS02565 () | 472368..472763 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| CA270_RS02570 () | 472763..473146 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| CA270_RS02575 () | 473147..473527 | + | 381 | WP_001029819.1 | hypothetical protein | - |
| CA270_RS02580 () | 473524..473916 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| CA270_RS02585 () | 473943..474905 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| CA270_RS02590 () | 475056..475415 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| CA270_RS02600 () | 475887..479120 | + | 3234 | WP_086353128.1 | phage tail tape measure protein | - |
| CA270_RS02605 () | 479113..479451 | + | 339 | WP_000024051.1 | phage tail protein | - |
| CA270_RS02610 () | 479451..480149 | + | 699 | WP_024238971.1 | phage minor tail protein L | - |
| CA270_RS02615 () | 480154..480897 | + | 744 | WP_024177847.1 | C40 family peptidase | - |
| CA270_RS02620 () | 480834..481436 | + | 603 | WP_000090882.1 | tail assembly protein | - |
| CA270_RS02625 () | 481497..484976 | + | 3480 | WP_086353129.1 | host specificity protein J | - |
| CA270_RS02630 () | 485044..485643 | + | 600 | WP_001518415.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| CA270_RS02635 () | 485708..487732 | + | 2025 | WP_086353130.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CA270_RS02640 () | 487729..488007 | + | 279 | WP_000654172.1 | hypothetical protein | - |
| CA270_RS02645 () | 488020..488313 | + | 294 | WP_033868709.1 | hypothetical protein | - |
| CA270_RS02650 () | 488333..488452 | + | 120 | Protein_495 | tail fiber assembly protein | - |
| CA270_RS02655 () | 488665..489522 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| CA270_RS02660 () | 489519..490376 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| CA270_RS02665 () | 490373..491200 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| CA270_RS02670 () | 491200..492114 | - | 915 | WP_086353131.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|