MGE detailed information
MGE type: Conjugative plasmid MGE length: 111688 bp
Accession: NZ_CP021206 Location: 1..111688 Organism: Escherichia coli strain Z1002 Replicon: plasmid p1002-NDM1
Accession: NZ_CP021206 Location: 1..111688 Organism: Escherichia coli strain Z1002 Replicon: plasmid p1002-NDM1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA268_RS28975 () | 216..1249 | - | 1034 | Protein_1 | IS91 family transposase ISWz1 | Transposase |
| CA268_RS28980 () | 1227..1736 | - | 510 | Protein_2 | hypothetical protein | - |
| CA268_RS28990 () | 2028..2306 | - | 279 | Protein_3 | hypothetical protein | - |
| CA268_RS28995 () | 2570..3171 | + | 602 | Protein_4 | hypothetical protein | - |
| CA268_RS29000 () | 3187..3639 | - | 453 | WP_000791469.1 | hypothetical protein | - |
| CA268_RS29005 () | 3810..4250 | - | 441 | WP_001326394.1 | hypothetical protein | - |
| CA268_RS29010 () | 4222..6720 | - | 2499 | Protein_7 | tRNA(Glu)-specific nuclease WapA | VF |
| CA268_RS29015 () | 6692..7294 | - | 603 | Protein_8 | IS91 family transposase ISPps1 | Transposase |
| CA268_RS29020 () | 7483..9123 | - | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| CA268_RS29025 () | 9179..9469 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| CA268_RS29030 () | 9663..9992 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| CA268_RS29035 () | 9997..11028 | + | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| CA268_RS29040 () | 11039..11677 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| CA268_RS29045 () | 11682..12047 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| CA268_RS29050 () | 12051..12863 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| CA268_RS29055 () | 13061..13758 | - | 698 | Protein_16 | IS1 family transposase ISKpn14 | Transposase |
| CA268_RS29060 () | 14068..14913 | + | 846 | WP_000855769.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| CA268_RS29065 () | 15011..15664 | - | 654 | WP_004201046.1 | endonuclease III | - |
| CA268_RS29070 () | 16007..16558 | - | 552 | Protein_19 | DNA cytosine methyltransferase | - |
| CA268_RS29080 () | 17175..17474 | + | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| CA268_RS29085 () | 17558..17800 | - | 243 | WP_000376617.1 | hypothetical protein | - |
| CA268_RS29090 () | 17927..18766 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CA268_RS29095 () | 18760..19107 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CA268_RS29100 () | 19276..19830 | - | 555 | WP_032488579.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib3 | - |
| CA268_RS29105 () | 20010..21023 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CA268_RS30460 () | 21226..21576 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| CA268_RS30750 () | 21596..21661 | + | 66 | Protein_27 | EAL domain-containing protein | - |
| CA268_RS29120 () | 21779..22543 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| CA268_RS29130 () | 23036..23620 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CA268_RS29135 () | 23620..24858 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| CA268_RS29140 () | 24855..25760 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CA268_RS29150 () | 25882..26586 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CA268_RS29155 () | 26796..27338 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| CA268_RS29160 () | 27351..28211 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| CA268_RS29170 () | 28354..29316 | + | 963 | Protein_35 | IS4 family transposase IS10R | Transposase |
| CA268_RS29175 () | 29426..30331 | + | 906 | Protein_36 | IS4 family transposase IS10R | Transposase |
| CA268_RS29180 () | 30380..31084 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CA268_RS29185 () | 31326..32186 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CA268_RS29190 () | 32516..32705 | + | 190 | Protein_39 | Tn3 family transposase | - |
| CA268_RS29195 () | 32742..33446 | + | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| CA268_RS29205 () | 33526..33975 | + | 450 | Protein_41 | PAS domain-containing protein | - |
| CA268_RS29210 () | 34043..35140 | - | 1098 | Protein_42 | TonB-dependent receptor | - |
| CA268_RS29215 () | 35197..36165 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| CA268_RS29220 () | 36200..37075 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| CA268_RS29225 () | 37325..38587 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| CA268_RS29230 () | 38872..39264 | - | 393 | WP_000479535.1 | hypothetical protein | - |
| CA268_RS29235 () | 39268..39846 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CA268_RS29240 () | 39843..41156 | - | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| CA268_RS29245 () | 41156..42073 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| CA268_RS29250 () | 42057..42683 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| CA268_RS29255 () | 42680..42961 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| CA268_RS29260 () | 43106..43483 | - | 378 | WP_001326174.1 | hypothetical protein | - |
| CA268_RS30755 () | 43483..43626 | - | 144 | WP_001275801.1 | hypothetical protein | - |
| CA268_RS29265 () | 43807..44469 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| CA268_RS29270 () | 44469..44846 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| CA268_RS29275 () | 44856..45302 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| CA268_RS29280 () | 45312..45941 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| CA268_RS29285 () | 45898..46482 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| CA268_RS29290 () | 46493..48358 | - | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| CA268_RS29295 () | 48355..51327 | - | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| CA268_RS29300 () | 51495..52112 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| CA268_RS29305 () | 52094..52327 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| CA268_RS29310 () | 52327..54519 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| CA268_RS29315 () | 54534..55022 | + | 489 | WP_004201072.1 | hypothetical protein | - |
| CA268_RS29320 () | 55113..55412 | - | 300 | WP_001326171.1 | hypothetical protein | - |
| CA268_RS29330 () | 55624..56241 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| CA268_RS29335 () | 56297..56953 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| CA268_RS29340 () | 56953..58380 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| CA268_RS29345 () | 58384..58884 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| CA268_RS29350 () | 58893..59204 | - | 312 | WP_002210541.1 | hypothetical protein | - |
| CA268_RS29355 () | 59210..59641 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| CA268_RS29360 () | 59709..60383 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| CA268_RS29365 () | 60358..60639 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| CA268_RS29370 () | 60632..61009 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| CA268_RS30760 () | 61336..61479 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| CA268_RS29375 () | 61571..62206 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| CA268_RS29380 () | 62259..62531 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| CA268_RS29385 () | 62580..63761 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| CA268_RS29390 () | 63765..64550 | - | 786 | WP_001151305.1 | Sporulation initiation inhibitor protein Soj | VF |
| CA268_RS29395 () | 64724..65035 | - | 312 | WP_000380893.1 | hypothetical protein | - |
| CA268_RS29400 () | 65017..65466 | - | 450 | WP_001053910.1 | hypothetical protein | - |
| CA268_RS29405 () | 65480..66724 | - | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| CA268_RS29410 () | 66717..67079 | - | 363 | WP_001258026.1 | hypothetical protein | - |
| CA268_RS29415 () | 67082..67324 | - | 243 | WP_001096360.1 | hypothetical protein | - |
| CA268_RS29425 () | 67562..67759 | - | 198 | WP_000532167.1 | hypothetical protein | - |
| CA268_RS29430 () | 67759..68697 | - | 939 | WP_000268394.1 | chromosome partitioning protein ParB | - |
| CA268_RS29435 () | 68814..69359 | - | 546 | WP_000435225.1 | hypothetical protein | - |
| CA268_RS29440 () | 69362..69931 | - | 570 | WP_001256126.1 | hypothetical protein | - |
| CA268_RS29445 () | 69943..70506 | - | 564 | WP_000004671.1 | hypothetical protein | - |
| CA268_RS29450 () | 70499..70927 | - | 429 | WP_000988988.1 | hypothetical protein | - |
| CA268_RS29455 () | 70924..71271 | - | 348 | WP_000039129.1 | hypothetical protein | - |
| CA268_RS29460 () | 71283..72467 | - | 1185 | WP_000245300.1 | hypothetical protein | - |
| CA268_RS29465 () | 72461..72655 | - | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| CA268_RS29470 () | 72704..73096 | - | 393 | WP_000018404.1 | hypothetical protein | - |
| CA268_RS29475 () | 73158..74621 | - | 1464 | WP_004201081.1 | AAA family ATPase | - |
| CA268_RS29480 () | 74695..75627 | - | 933 | WP_000434070.1 | hypothetical protein | - |
| CA268_RS29490 () | 76189..76686 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| CA268_RS29495 () | 76689..77177 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| CA268_RS29500 () | 77274..77609 | + | 336 | WP_000683477.1 | hypothetical protein | - |
| CA268_RS29505 () | 77624..78094 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| CA268_RS29510 () | 78087..78458 | - | 372 | WP_000516918.1 | hypothetical protein | - |
| CA268_RS29515 () | 78469..78663 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| CA268_RS29525 () | 79004..79552 | - | 549 | WP_001061573.1 | hypothetical protein | - |
| CA268_RS29530 () | 79715..80065 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CA268_RS29535 () | 80070..80372 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CA268_RS29540 () | 80399..80692 | - | 294 | WP_001239998.1 | hypothetical protein | - |
| CA268_RS29545 () | 80781..81053 | - | 273 | WP_001043046.1 | HU family DNA-binding protein | - |
| CA268_RS29550 () | 81111..81638 | - | 528 | WP_004201083.1 | thermonuclease family protein | - |
| CA268_RS30765 () | 81641..81946 | - | 306 | WP_171820680.1 | hypothetical protein | - |
| CA268_RS29560 () | 81858..82715 | - | 858 | WP_001167036.1 | hypothetical protein | - |
| CA268_RS29565 () | 82702..82932 | - | 231 | WP_000972665.1 | hypothetical protein | - |
| CA268_RS29570 () | 82932..83450 | - | 519 | WP_000210757.1 | nitrite reductase | - |
| CA268_RS29575 () | 83447..83893 | - | 447 | WP_000919343.1 | hypothetical protein | - |
| CA268_RS29580 () | 83893..84252 | - | 360 | WP_000422769.1 | hypothetical protein | - |
| CA268_RS29585 () | 84310..84738 | - | 429 | WP_000591076.1 | hypothetical protein | - |
| CA268_RS29590 () | 84772..85632 | - | 861 | WP_004201087.1 | DsbA family protein | - |
| CA268_RS29595 () | 85648..86607 | - | 960 | WP_000829617.1 | S49 family peptidase | - |
| CA268_RS29600 () | 86607..87461 | - | 855 | WP_000539391.1 | hypothetical protein | - |
| CA268_RS29605 () | 87466..87759 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| CA268_RS29610 () | 87770..88243 | - | 474 | WP_000057876.1 | hypothetical protein | - |
| CA268_RS29615 () | 88340..88861 | - | 522 | WP_000648873.1 | hypothetical protein | - |
| CA268_RS29620 () | 88864..89385 | - | 522 | WP_000393783.1 | hypothetical protein | - |
| CA268_RS29625 () | 89390..89998 | - | 609 | WP_000849069.1 | hypothetical protein | - |
| CA268_RS29630 () | 90266..91381 | + | 1116 | WP_000946104.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| CA268_RS29635 () | 91399..91833 | + | 435 | WP_004201092.1 | hypothetical protein | - |
| CA268_RS29650 () | 92870..93970 | - | 1101 | WP_001348532.1 | hypothetical protein | - |
| CA268_RS29655 () | 93955..94242 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| CA268_RS29660 () | 94247..94786 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| CA268_RS29665 () | 95285..96268 | + | 984 | WP_000077457.1 | ParM/StbA family protein | - |
| CA268_RS29670 () | 96285..96578 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| CA268_RS29675 () | 96580..96999 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| CA268_RS29680 () | 97059..97610 | - | 552 | WP_001020646.1 | hypothetical protein | - |
| CA268_RS29685 () | 97607..98215 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| CA268_RS29690 () | 98226..98759 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| CA268_RS29695 () | 98759..99031 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| CA268_RS29700 () | 99747..100109 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| CA268_RS29705 () | 100147..103761 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CA268_RS29710 () | 103774..105207 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| CA268_RS29715 () | 105209..106249 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| CA268_RS29720 () | 106360..107871 | - | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| CA268_RS29730 () | 108158..109198 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| CA268_RS29735 () | 109351..110226 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| CA268_RS29740 () | 110543..111034 | - | 492 | WP_000139717.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|