MGE detailed information
MGE type: Genomic_island MGE length: 10325 bp
Accession: NZ_CP021202 Location: 5056774..5067098 Organism: Escherichia coli strain Z1002 Replicon: chromosome
Accession: NZ_CP021202 Location: 5056774..5067098 Organism: Escherichia coli strain Z1002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA268_RS26010 () | 5052007..5053338 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| CA268_RS26015 () | 5053360..5053590 | - | 231 | Protein_4715 | threonine ammonia-lyase | - |
| CA268_RS26020 () | 5053659..5054639 | + | 981 | WP_000019402.1 | IS5-like element IS5 family transposase | - |
| CA268_RS26025 () | 5054787..5055548 | - | 762 | Protein_4717 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| CA268_RS26035 () | 5055647..5056585 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| CA268_RS30970 () | 5056900..5057118 | + | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| CA268_RS26045 () | 5057374..5057913 | + | 540 | WP_000675749.1 | hypothetical protein | - |
| CA268_RS26050 () | 5057935..5059122 | + | 1188 | WP_001521377.1 | YhaC family protein | - |
| CA268_RS26060 () | 5059922..5061067 | - | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| CA268_RS26065 () | 5061164..5062054 | - | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| CA268_RS26070 () | 5062084..5062854 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| CA268_RS26075 () | 5062870..5064204 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| CA268_RS26080 () | 5064579..5066150 | + | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| CA268_RS26085 () | 5066299..5066634 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| CA268_RS26090 () | 5066634..5067098 | + | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| CA268_RS26095 () | 5067153..5067962 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| CA268_RS26105 () | 5068211..5069491 | + | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| CA268_RS26110 () | 5069514..5069987 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| CA268_RS26115 () | 5069998..5070777 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| CA268_RS26120 () | 5070767..5071645 | + | 879 | WP_001298314.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| CA268_RS26125 () | 5071663..5072097 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|