MGE detailed information
MGE type: Prophage MGE length: 51730 bp
Accession: NZ_CP021202 Location: 3187906..3239635 Organism: Escherichia coli strain Z1002 Replicon: chromosome
Accession: NZ_CP021202 Location: 3187906..3239635 Organism: Escherichia coli strain Z1002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA268_RS16380 () | 3184419..3185165 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CA268_RS16385 () | 3185254..3185940 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| CA268_RS16390 () | 3186118..3186321 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CA268_RS16395 () | 3186357..3187817 | - | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| CA268_RS16400 () | 3187906..3189189 | - | 1284 | Protein_2935 | MHS family MFS transporter YdfJ | - |
| CA268_RS30160 () | 3189793..3189906 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| CA268_RS16405 () | 3189975..3190208 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CA268_RS16410 () | 3190525..3191115 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CA268_RS16415 () | 3191213..3191323 | - | 111 | Protein_2939 | tail fiber assembly protein | - |
| CA268_RS16420 () | 3191343..3191636 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| CA268_RS16425 () | 3191647..3192351 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| CA268_RS16430 () | 3192361..3192642 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| CA268_RS16435 () | 3192639..3195038 | - | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CA268_RS16440 () | 3195103..3195702 | - | 600 | WP_001542091.1 | hypothetical protein | VF |
| CA268_RS16445 () | 3195770..3199249 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| CA268_RS16450 () | 3199310..3199912 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| CA268_RS16455 () | 3199849..3200592 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| CA268_RS16460 () | 3200598..3201296 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| CA268_RS16465 () | 3201296..3201625 | - | 330 | WP_000847345.1 | phage tail protein | - |
| CA268_RS16470 () | 3201622..3204183 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| CA268_RS16475 () | 3204176..3204610 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| CA268_RS16480 () | 3204592..3205014 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CA268_RS16485 () | 3205030..3205770 | - | 741 | WP_001349920.1 | phage tail protein | - |
| CA268_RS16490 () | 3205778..3206173 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| CA268_RS16495 () | 3206170..3206749 | - | 580 | Protein_2955 | phage tail protein | - |
| CA268_RS16500 () | 3206761..3207114 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| CA268_RS16505 () | 3207126..3207524 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| CA268_RS16510 () | 3207566..3208591 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| CA268_RS16515 () | 3208646..3208978 | - | 333 | WP_001708751.1 | head decoration protein | - |
| CA268_RS16520 () | 3208988..3210307 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| CA268_RS16525 () | 3210288..3211889 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| CA268_RS16530 () | 3211886..3212092 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CA268_RS16535 () | 3212089..3214014 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| CA268_RS16540 () | 3213989..3214534 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CA268_RS16545 () | 3214923..3215156 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CA268_RS16550 () | 3215214..3215624 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CA268_RS16555 () | 3215776..3215949 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CA268_RS16560 () | 3216121..3216276 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CA268_RS30165 () | 3216356..3216421 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CA268_RS16565 () | 3216424..3216612 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CA268_RS16570 () | 3216623..3216835 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CA268_RS16575 () | 3217198..3217695 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CA268_RS16580 () | 3217692..3218225 | - | 534 | WP_001092971.1 | lysozyme | - |
| CA268_RS16585 () | 3218222..3218533 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CA268_RS16590 () | 3218538..3218753 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CA268_RS30930 () | 3218973..3219143 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CA268_RS16595 () | 3219507..3219722 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CA268_RS16600 () | 3220023..3220235 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CA268_RS30170 () | 3220290..3220379 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CA268_RS16605 () | 3220657..3221409 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CA268_RS16610 () | 3221423..3222472 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CA268_RS16615 () | 3222474..3222752 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CA268_RS16620 () | 3222819..3223070 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CA268_RS16625 () | 3223287..3223442 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CA268_RS16630 () | 3223514..3223801 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CA268_RS16635 () | 3223801..3224040 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CA268_RS16640 () | 3224065..3224370 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CA268_RS16645 () | 3224573..3224905 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CA268_RS16650 () | 3225342..3226655 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CA268_RS16655 () | 3227139..3228167 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| CA268_RS16660 () | 3228164..3228778 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| CA268_RS16665 () | 3228987..3229652 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| CA268_RS16670 () | 3229855..3230253 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| CA268_RS16675 () | 3230294..3231259 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| CA268_RS16680 () | 3231240..3231761 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| CA268_RS16685 () | 3231745..3231972 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| CA268_RS16690 () | 3232053..3232460 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| CA268_RS16695 () | 3232629..3232784 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CA268_RS16700 () | 3232786..3233361 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| CA268_RS16705 () | 3233848..3234036 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CA268_RS16710 () | 3234033..3234224 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| CA268_RS16715 () | 3234318..3236789 | + | 2472 | WP_000048363.1 | exonuclease | - |
| CA268_RS16720 () | 3236862..3237113 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CA268_RS16725 () | 3237148..3238428 | + | 1281 | WP_021523105.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CA268_RS16730 () | 3238430..3238558 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| CA268_RS16735 () | 3238616..3239635 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| CA268_RS16740 () | 3239647..3240861 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CA268_RS16750 () | 3241067..3241393 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| CA268_RS16755 () | 3241528..3241869 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| CA268_RS16760 () | 3241904..3242464 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CA268_RS16765 () | 3242467..3243177 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| CA268_RS16770 () | 3243285..3243590 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|