MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP021202 Location: 1015543..1024893 Organism: Escherichia coli strain Z1002 Replicon: chromosome
Accession: NZ_CP021202 Location: 1015543..1024893 Organism: Escherichia coli strain Z1002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA268_RS05110 () | 1012272..1012991 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CA268_RS05115 () | 1012988..1014619 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CA268_RS05120 () | 1014800..1015030 | + | 231 | WP_000373291.1 | (4Fe-4S)-binding protein | - |
| CA268_RS05125 () | 1015042..1015314 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CA268_RS05130 () | 1015543..1015839 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CA268_RS05135 () | 1015867..1016040 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CA268_RS05140 () | 1016159..1017676 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CA268_RS05145 () | 1017913..1019370 | - | 1458 | WP_000856827.1 | dipeptide/tripeptide permease DtpC | - |
| CA268_RS05150 () | 1019429..1021576 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CA268_RS05155 () | 1021656..1022990 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CA268_RS05165 () | 1023355..1024893 | - | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CA268_RS05175 () | 1025697..1027232 | - | 1536 | WP_000492897.1 | EAL domain-containing protein | - |
| CA268_RS05180 () | 1027303..1027464 | - | 162 | Protein_910 | DUF4942 domain-containing protein | - |
| CA268_RS05185 () | 1027555..1029054 | + | 1500 | WP_029700729.1 | IS21-like element ISEc10 family transposase | - |
| CA268_RS05190 () | 1029051..1029806 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.009 |