MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 63992 bp
Accession: NZ_CP021150 Location: 1..63992 Organism: Vibrio campbellii strain LA16-V1 Replicon: plasmid pLA16-4
Accession: NZ_CP021150 Location: 1..63992 Organism: Vibrio campbellii strain LA16-V1 Replicon: plasmid pLA16-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAY59_RS28360 () | 303..1304 | - | 1002 | WP_086370883.1 | hypothetical protein | - |
| CAY59_RS28365 () | 1305..5654 | - | 4350 | WP_086370884.1 | DUF4150 domain-containing protein | - |
| CAY59_RS28370 () | 5672..6124 | - | 453 | WP_021018079.1 | hypothetical protein | - |
| CAY59_RS28380 () | 6692..6934 | + | 243 | WP_086369808.1 | hypothetical protein | - |
| CAY59_RS28385 () | 7214..7807 | + | 594 | WP_085343577.1 | tyrosine-type recombinase/integrase | - |
| CAY59_RS28390 () | 7996..8400 | + | 405 | WP_085343578.1 | S-adenosylhomocysteine hydrolase | Antitoxin Detail |
| CAY59_RS28395 () | 8402..9343 | + | 942 | WP_086370885.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CAY59_RS28400 () | 9363..10880 | + | 1518 | WP_086370886.1 | type I restriction-modification system subunit M | - |
| CAY59_RS28405 () | 10870..12129 | + | 1260 | WP_086370887.1 | restriction endonuclease subunit S | - |
| CAY59_RS28410 () | 12195..13031 | + | 837 | WP_086370888.1 | hypothetical protein | - |
| CAY59_RS28415 () | 13074..16379 | + | 3306 | WP_086370889.1 | type I restriction endonuclease subunit R | - |
| CAY59_RS28420 () | 16382..17158 | + | 777 | WP_061007686.1 | M48 family metallopeptidase | - |
| CAY59_RS29210 () | 17169..17342 | + | 174 | WP_086370890.1 | hypothetical protein | - |
| CAY59_RS28430 () | 17637..18248 | - | 612 | WP_086370891.1 | mobile mystery protein B | - |
| CAY59_RS28435 () | 18245..18733 | - | 489 | WP_086370892.1 | mobile mystery protein A | - |
| CAY59_RS28440 () | 19189..19836 | + | 648 | WP_086370893.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CAY59_RS28445 () | 19942..20412 | + | 471 | WP_086370894.1 | hypothetical protein | - |
| CAY59_RS28450 () | 20467..21027 | + | 561 | WP_086370895.1 | hypothetical protein | - |
| CAY59_RS28455 () | 21178..21516 | + | 339 | WP_086370896.1 | hypothetical protein | - |
| CAY59_RS28460 () | 21593..21862 | + | 270 | WP_086370897.1 | hypothetical protein | - |
| CAY59_RS28465 () | 22009..22203 | - | 195 | WP_086370942.1 | hypothetical protein | - |
| CAY59_RS28475 () | 22575..22844 | - | 270 | WP_086370899.1 | hypothetical protein | - |
| CAY59_RS28480 () | 22844..23419 | - | 576 | WP_086370900.1 | ParA family protein | - |
| CAY59_RS28485 () | 23581..23763 | + | 183 | WP_024699799.1 | type II toxin-antitoxin system HicA family toxin | - |
| CAY59_RS28490 () | 23785..24207 | + | 423 | WP_031501967.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CAY59_RS28495 () | 24893..25741 | - | 849 | WP_086370901.1 | hypothetical protein | - |
| CAY59_RS28500 () | 26141..26803 | - | 663 | WP_086370943.1 | XRE family transcriptional regulator | - |
| CAY59_RS28510 () | 27554..27928 | + | 375 | WP_086370903.1 | TrbC/VirB2 family protein | - |
| CAY59_RS28515 () | 27940..28233 | + | 294 | WP_086370904.1 | VirB3 family type IV secretion system protein | - |
| CAY59_RS28520 () | 28230..30641 | + | 2412 | WP_086370905.1 | conjugal transfer protein TrbE | - |
| CAY59_RS28525 () | 30628..31404 | + | 777 | WP_086370906.1 | P-type conjugative transfer protein TrbJ | - |
| CAY59_RS28530 () | 31601..33400 | + | 1800 | WP_157664735.1 | P-type conjugative transfer protein TrbL | - |
| CAY59_RS28535 () | 33345..34058 | + | 714 | WP_086370908.1 | type IV secretion system protein | - |
| CAY59_RS28540 () | 34344..35276 | + | 933 | WP_086370909.1 | P-type conjugative transfer protein TrbG | - |
| CAY59_RS28545 () | 35285..35710 | + | 426 | WP_086370910.1 | hypothetical protein | - |
| CAY59_RS28550 () | 35703..36986 | + | 1284 | WP_086370911.1 | hypothetical protein | - |
| CAY59_RS28555 () | 37078..37536 | + | 459 | WP_086370912.1 | hypothetical protein | - |
| CAY59_RS28560 () | 37548..37754 | + | 207 | WP_086370913.1 | hypothetical protein | - |
| CAY59_RS28565 () | 37755..37940 | + | 186 | WP_086370914.1 | hypothetical protein | - |
| CAY59_RS29015 () | 37956..38117 | - | 162 | WP_157664736.1 | hypothetical protein | - |
| CAY59_RS28570 () | 38152..38682 | + | 531 | WP_086370915.1 | Outer membrane porin F | VF |
| CAY59_RS28575 () | 38794..40743 | + | 1950 | WP_086370916.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CAY59_RS28580 () | 40740..41276 | + | 537 | WP_086370917.1 | conjugative transfer signal peptidase TraF | - |
| CAY59_RS28585 () | 41291..41731 | + | 441 | WP_086370918.1 | hypothetical protein | - |
| CAY59_RS28590 () | 41885..44089 | + | 2205 | WP_086370919.1 | DNA topoisomerase 3 | - |
| CAY59_RS28595 () | 44140..44652 | + | 513 | WP_086370920.1 | restriction endonuclease | - |
| CAY59_RS28600 () | 44655..45164 | + | 510 | WP_086370921.1 | Type IV secretion system protein virB1 | VF |
| CAY59_RS28605 () | 45157..45834 | + | 678 | WP_086370922.1 | hypothetical protein | - |
| CAY59_RS28610 () | 45831..47549 | + | 1719 | WP_086370923.1 | PcfJ domain-containing protein | - |
| CAY59_RS28615 () | 47598..47993 | + | 396 | WP_086370924.1 | hypothetical protein | - |
| CAY59_RS28620 () | 48071..48253 | + | 183 | WP_086370925.1 | hypothetical protein | - |
| CAY59_RS28625 () | 48246..49703 | + | 1458 | WP_157664737.1 | DUF1738 domain-containing protein | - |
| CAY59_RS28630 () | 49747..50325 | + | 579 | WP_086370927.1 | hypothetical protein | - |
| CAY59_RS28635 () | 50337..50930 | + | 594 | WP_025789626.1 | hypothetical protein | - |
| CAY59_RS28640 () | 51083..52798 | - | 1716 | WP_157664738.1 | Protein TraI | Relaxase |
| CAY59_RS28645 () | 52858..53178 | - | 321 | WP_157664739.1 | hypothetical protein | - |
| CAY59_RS28650 () | 53471..53830 | + | 360 | WP_086370930.1 | hypothetical protein | - |
| CAY59_RS28655 () | 53860..54618 | + | 759 | WP_086370931.1 | AAA family ATPase | - |
| CAY59_RS28660 () | 54615..55223 | + | 609 | WP_086370932.1 | hypothetical protein | - |
| CAY59_RS28665 () | 55345..56292 | + | 948 | WP_025789632.1 | Type IV secretion system protein VirB11 | VF |
| CAY59_RS28670 () | 56410..56607 | - | 198 | WP_086370933.1 | hypothetical protein | - |
| CAY59_RS29020 () | 56666..56821 | - | 156 | WP_153189414.1 | hypothetical protein | - |
| CAY59_RS28675 () | 56824..57126 | - | 303 | WP_086370934.1 | hypothetical protein | - |
| CAY59_RS28680 () | 57172..57510 | - | 339 | WP_086370935.1 | hypothetical protein | - |
| CAY59_RS28685 () | 57593..57877 | - | 285 | WP_086370936.1 | hypothetical protein | - |
| CAY59_RS28690 () | 58471..59055 | + | 585 | WP_023625126.1 | DUF2913 family protein | - |
| CAY59_RS28695 () | 59072..59272 | + | 201 | WP_086370937.1 | hypothetical protein | - |
| CAY59_RS28700 () | 60741..61598 | - | 858 | WP_086370938.1 | restriction endonuclease | - |
| CAY59_RS28705 () | 61702..62067 | - | 366 | WP_157664740.1 | hypothetical protein | - |
| CAY59_RS28710 () | 62456..63058 | + | 603 | WP_086370940.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|